Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2579 ATGGAAGAAAGATATGAGCCATTAAAGGAACTTGGTTCTGGAAATTTTGGTGTTGCTAGGTTGGCTAAAGACAAAAAAACTGGTGAACTTGTTGCTCTCAAATACATAGAGAGGGGCAAAAAGATTGATGAGAATGTGCAAAGGGAGATAATTAATCACAGATCATTAAGGCATCCTAATATTGTCAGGTTCAAAGAGGTCTTGCTGACCCCTTCTCATTTAGCCATTGTCTTGGAGTATGCTGCCGGTGGTGAACTCTTCGAGAGAATATGCACTGCTGGTCGATTTAGTGAAGACGAGGCAAGGTATTTCTTCCAACAGCTACTATCTGGCGTTAGCTACTGTCATTCAATGGAAATTTGTCATAGAGATCTGAAATTGGAAAACACTCTCTTGGACGGAAATCCATCCCCTCGGCTTAAAATTTGCGACTTTGGTTACTCCAAGTCTGGAATACTGCACTCTCAACCGAAGTCAACAGTTGGAACTCCTGCTTACATTGCTCCCGAGGTTCTATCACGAAAGGAGTACGATGGAAAGATTGCAGATGTTTGGTCCTGTGGTGTGACTCTATATGTAATGCTAGTTGGTGCATATCCATTTGAAGAACCAGAAGATCCTAGAAATTTCAGAAAGACTATTGGGAGAATAATAGGTGTTCAATACTCCATACCCGACTATGTACGCATTTCTGCAGATTGTAGGAATCTTCTATCACGCATCTTTGTTGCCGATCCTGCCAAGAGGATCACCATCCCAGAGATAAAACAGAACCCTTGGTTTTTGAAGAATATGCCGAAAGAGATAATTGAAGCTGAAAGAAAAGGTTATGTGGAAACAAAGGACCAACCAAGTCAAAGTGTAGAAGAAATCATGAGGATCATACAAGAGGCGAGGATACCGGGACAAGGATCCAAACCTGGCGAGGATGGTCAAGCTGACACCGGTTCAATGAACATTGAAGACGACGAGGAAATTGATGTCAGTGGTGAATATGAAAATGTGTGA 1008 0.4196 MEERYEPLKELGSGNFGVARLAKDKKTGELVALKYIERGKKIDENVQREIINHRSLRHPNIVRFKEVLLTPSHLAIVLEYAAGGELFERICTAGRFSEDEARYFFQQLLSGVSYCHSMEICHRDLKLENTLLDGNPSPRLKICDFGYSKSGILHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEEPEDPRNFRKTIGRIIGVQYSIPDYVRISADCRNLLSRIFVADPAKRITIPEIKQNPWFLKNMPKEIIEAERKGYVETKDQPSQSVEEIMRIIQEARIPGQGSKPGEDGQADTGSMNIEDDEEIDVSGEYENV* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2579 335 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2579 335 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2579 335 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Tpr5g2579 335 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Tpr5g2579 335 CDD STKc_SnRK2 4 260 - -
Tpr5g2579 335 MobiDBLite consensus disorder prediction 298 335 - -
Tpr5g2579 335 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Tpr5g2579 335 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 328 - -
Tpr5g2579 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Tpr5g2579 335 PANTHER SERINE/THREONINE KINASE 3 328 - -
Tpr5g2579 335 SUPERFAMILY Protein kinase-like (PK-like) 3 270 IPR011009 -
Tpr5g2579 335 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2579 335 MobiDBLite consensus disorder prediction 316 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2579 Tpr-Chr5 47806301 47810101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2579 4 274 CBL-interacting serine-threonine protein kinases AT4G24400 43.728 4.81e-72 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Tpr5g2579 Pkinase 5.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2579 K14498 - gmx:100817713 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2579 5 47806301 47810101 Tpr5g2579 5 47806301 47810101 ECH