Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2578 ATGACTGGAGGTGAAACAGATGAAGTGAATATAGAGGAAGAGACAGAGATAACAAAGGAGATTTCAGAGAAGAAGCTGAAAGATAGAAAGGTGTCATGGGCAAAACTACGTCGTGTAGACTCTCTCAACTTGGAAGCTGGAAGAGTTTCTATGAATGCAAACCACCATTCCAAGATGGGTTGGAGCGTAACATTGAGTTTGGCATTTCAAAGCATAGGGATTGTATATGGTGATATTGGAACATCACCACTTTATGTGTATGCTAGTACTTTTACAGATGGAATTAAAAACAACGATGACATTCTTGGAGTATTATCTCTAATCATCTATACCATTGTGCTCATTCCCATGCTCAAATACGTTTTTATTGTCTTATGGGCTAATGACAATGGCAATGGTGGAGCATTTGCACTATACTCATTGATATGTAGATATTTAAAGGTGAGTTTGGCTCCCAATCAACAGCCAGAGGACATGGAACTTTCTAATTACAAGCTTGAAATACCATCTAGCCAGCAGAAAAGAGCTTATAAACTAAAGCATAAAATTGAGAATAGTCATTTTGCAAGAATTCTACTTTTACTTCTAGCTATAATGGGAACTGCCATGGTCATTGGAGATGGGATCCTCACTCCATCAATTTCAGTCCTTTCTGCGGTGAGCGGAATCAGTACATCACTAGGTCAAGATGCTGTTGTGGGCATTACTGTTGCAATTTTGGTCGTCCTATTTAGCATGCAACGATTTGGTACTGATAAAGTGGGAACTTTATTTGCTCCAATTATTTTAGTATGGTTTACATTTATTGGTGGAATTGGTCTCTACAATTTATTCAAACATGACATTGGAGTATTAAGAGCTTTTAATCCAAAATATATAGTTGATTACTTCAAACGAAATGGTAAAGAAGGATGGTTATCACTAGGTGGAGTCTTTTTATGCATTACAGGATCTGAGGCTATGTTTGCTGATTTGGGTCACTTCAGTGTACGAGCCATTCAAATTAGCTTTTCTTTTGTTACATTCCCTGCAATCTTGACAGCATATATTGGACAAGCAGCATATCTAAGAAAGTTTCCTGACAAAGTGGGAAATACTTTCTATGATAGTATACCTGACCCTTTGTATTGGCCAACATTTGTTGTGGCTATTGGTGCTGCCATTATTGCTAGTCAAGCTATGATTTCAGGAGCCTTTTCCATCATATCACAGGCCTTAAGTCTAGGTTGTTTCCCTAGAGTTAGGGTTGTGCATACTTCAACTAAGCATCAAGGTCAAGTGTATATTCCAGAGATCAACTACATGTTCATGATTGGATGTATTATAGTCTGTGTTGCCTTCAAGACCACAGAAAATATCAGTCATGCATATGGGATTGCTGTTATTGGTGATATGATGATAACAACAACACTAGTTTCACTTATAATGCTTGTTATATGGAAGAAGAGTTTATGGATGGTCATCATTTTCTTTTTGGTATTTGGTAGCACAGAGTTTCTTTATTTATCATCTCAAATAACCAAGTTTACAGCAGGAGGATATTTTCCAATTGTACTAGCTACTGTCTTGACAATGGTTATGGGAATTTGGCATTATGTGCACAAAGAAAGATACATGTTTGAACTCAAAAACAAAGTTTCGACCGAGTATTTGAAGGGATTAGCCAACAACACTGATGTTCATAGAGTGCCTGGAATTGGACTTTTGTATTCTGAGCTTGTACAAGGAATTCCGCCGATATTTCCACATTTTATAGCTAGTGTACCATCTATTCATTCGGTTGTTGTATTTGTTTCCATCAAGACAATTCCTGTTAGTAGAGTTGCATTGGAAGAAAGGTTTTTGTTTCGACAAGTTGAACCGAGGGAGTATAGAATATTTCGATGTGTTGTGAGGCATGGTTACAGTGATGTACTTGGGGATCCTTTAGAGTTTGAGTCACAATTAATGCAAAATCTCAAAGGATTCATTCAACAAGAGAATTTCATGCTTGAGGTTAATGATGGTACTAATACTAATAATGTAACTACAAGTGAACAATTAGTGGCACCTACTTCCACTAATGAGAGTGATCAAAGGGAAGATGATTCAGCTAAAGAATTGAAACCAAGGTCTAATAATTCATCAAGTAGAATCATCCCAAGTCTTGGTGTGTCTCATGTATCATCAGATTCGATACGATCATTACCTGGAAGTGCGACAAAATCATCAAATTTCTATGCACCTATCTTCCAAGGACCTGAAGAGGAAATTAAGTTTATTGATAAAGCAATGGAAAGAGGTGTGGTTTATATGATAGGTGAAGCAGAAGTAGTAGCTCATCCAAATTCTTCTATTTTGAATAAGATTGTTGTCAACTATGCTTATAGTTTCTTGAGGAAGAATTTTAGGCAGGCAGAACAATCCATAGCTATTCCACACAGGAGACTTCTTAAGGTTGGAATGACATATGAATTGTAA 2460 0.3691 MTGGETDEVNIEEETEITKEISEKKLKDRKVSWAKLRRVDSLNLEAGRVSMNANHHSKMGWSVTLSLAFQSIGIVYGDIGTSPLYVYASTFTDGIKNNDDILGVLSLIIYTIVLIPMLKYVFIVLWANDNGNGGAFALYSLICRYLKVSLAPNQQPEDMELSNYKLEIPSSQQKRAYKLKHKIENSHFARILLLLLAIMGTAMVIGDGILTPSISVLSAVSGISTSLGQDAVVGITVAILVVLFSMQRFGTDKVGTLFAPIILVWFTFIGGIGLYNLFKHDIGVLRAFNPKYIVDYFKRNGKEGWLSLGGVFLCITGSEAMFADLGHFSVRAIQISFSFVTFPAILTAYIGQAAYLRKFPDKVGNTFYDSIPDPLYWPTFVVAIGAAIIASQAMISGAFSIISQALSLGCFPRVRVVHTSTKHQGQVYIPEINYMFMIGCIIVCVAFKTTENISHAYGIAVIGDMMITTTLVSLIMLVIWKKSLWMVIIFFLVFGSTEFLYLSSQITKFTAGGYFPIVLATVLTMVMGIWHYVHKERYMFELKNKVSTEYLKGLANNTDVHRVPGIGLLYSELVQGIPPIFPHFIASVPSIHSVVVFVSIKTIPVSRVALEERFLFRQVEPREYRIFRCVVRHGYSDVLGDPLEFESQLMQNLKGFIQQENFMLEVNDGTNTNNVTTSEQLVAPTSTNESDQREDDSAKELKPRSNNSSSRIIPSLGVSHVSSDSIRSLPGSATKSSNFYAPIFQGPEEEIKFIDKAMERGVVYMIGEAEVVAHPNSSILNKIVVNYAYSFLRKNFRQAEQSIAIPHRRLLKVGMTYEL* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2578 819 Pfam K+ potassium transporter 68 637 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr5g2578 819 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 25 818 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr5g2578 819 TIGRFAM kup: potassium uptake protein 67 818 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tpr5g2578 819 MobiDBLite consensus disorder prediction 673 688 - -
Tpr5g2578 819 MobiDBLite consensus disorder prediction 673 713 - -
Tpr5g2578 819 PANTHER POTASSIUM TRANSPORTER 5 25 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2578 Tpr-Chr5 47795921 47804307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2578 23 819 Inorganic Solute Cotransporters AT4G13420 59.800 0.0 969
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2578 K03549 - gmx:100814313 1219.91