Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2571 ATGGAAAACTTCGACGAATCTGTTGATGTTGAGTCCAGAGACCTTCATTCCACTAATGGTGGTGATACACATGATTCAGAATTGAATGCCGACGAGGAGGAGAGTTATTCGGCATCTAGTGGGGATAAAAGTTCAGAGACTGGCGATGATGCATCTGATAATGGCAATAATGATGGAGATGCAATTGATAGTGAGTTAAATTTTGATTCAATTACTTCTGATGAGATTCGAGCTATGGAATTTGCTACTGTTTTTAGTGAAGCTTATGATTTTTATTACCGGTATGCTAAATGTAAGGGTTTTGCTTTTAGGAAAGCTTCTAGTAGGATAAGAGAGATAAATGGTAATAAAATAACACAAATGAAGCAGTTTGTATGCAATATACCTGATTTAAGAGAGAAGAAACATTTAACCAGGTTAGATAGAAAATTAGAACATAGACATTTGAGCCGTACAAATTCTGAAGATGGGCTTCGTGTGCAATACGAAAAACAAAAGGATAGATATGTAGTTACCGCTTTTGAAGAGTGTCATAACCATGAATTAACCCCAGTTAGGTTTGTTAACATGCACCCTGTTTATCGTAAAATTTCTGAAGCAGATAAGGCTCGGATTGATGGTCTTCAAACACGTGGAATTAGAACTTATCATATAATGGGGTACATGATTGCCCAAAAGGGTGGATATGCTAGTGTTGGTTTTTCAAATAAAGATTTGTACAATTATTTTGAAAAAAAAATGCGTGAGTGTATTAAAGATGGCGATGTTGTCGCTTCTTTAAATTATCTGAATGTAAAGTTGTCTGCTGATCCCATGTTATATGTTGAGTATGCTGTCAACAATAGTGATGGACGAATGAAGTCTCTGTTTTGGACTGATGGGAGTAGTAGATCTGACTACTTTTGTTTTGGTGATGTGATACAACTATCCATTGGTTGTATTTTCATGGTGTAA 954 0.3585 MENFDESVDVESRDLHSTNGGDTHDSELNADEEESYSASSGDKSSETGDDASDNGNNDGDAIDSELNFDSITSDEIRAMEFATVFSEAYDFYYRYAKCKGFAFRKASSRIREINGNKITQMKQFVCNIPDLREKKHLTRLDRKLEHRHLSRTNSEDGLRVQYEKQKDRYVVTAFEECHNHELTPVRFVNMHPVYRKISEADKARIDGLQTRGIRTYHIMGYMIAQKGGYASVGFSNKDLYNYFEKKMRECIKDGDVVASLNYLNVKLSADPMLYVEYAVNNSDGRMKSLFWTDGSSRSDYFCFGDVIQLSIGCIFMV* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2571 317 MobiDBLite consensus disorder prediction 1 57 - -
Tpr5g2571 317 PANTHER OS02G0262500 PROTEIN 76 307 - -
Tpr5g2571 317 Pfam FAR1 DNA-binding domain 90 183 IPR004330 -
Tpr5g2571 317 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 76 307 IPR031052 GO:0006355
Tpr5g2571 317 MobiDBLite consensus disorder prediction 1 21 - -
Tpr5g2571 317 MobiDBLite consensus disorder prediction 40 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2571 Tpr-Chr5 47713733 47714686 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g2571 FAR1 7.6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2571 - - ccaj:109792835 274.633