Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2564 ATGAAGTGTTTCTTCTTCAAAGAAAAATCCAAATCCGCCCCAGAATTGCAGAACAAGAAGAAGAACAAGAATCCTGCTTTCAACCGTGCAACAAACTCAACTGGCTCTATATCTTCTCCCAGAAGTGTGAAGGATTTGTACAGAGAAAAAGAACATAGTTTTAGAGTTTTCACTCTTCATGAACTTAGAGATGCTACCAATGGTTTCAATAGGATGCTCAAGATTGGTGAAGGAGGTTTTGGAAGTGTTTATAAAGGATCAATTTTGCCACCAAATGGACAAGGTGATCCAATTATAGTTGCTATCAAAAGGCTTAACACTCGTGGATTTCAGGGTCATAAAGAATGGCTTGCAGAAGTTCAATTTCTCAGCATTGTTAATCACCCAAATTTGGTTAAGCTTTTGGGATATTGCTCTGTAGACGGAGAAAGAGGAATCCAACGGCTATTGGTGTATGAGTTCATGCCAAACAGAAGCTTGGAAAATCACCTTTTTAGTAAAACTTTACCAACCCTTCCATGGAAAACAAGATTGGAAATCATGCTTGGTGCTGCTGAAGGATTAGCTTATCTACATGAGGGATTGGAGATACAGGTGATCTACCGAGATTTCAAATCTTCAAATGTCCTATTGGATGAGGATTTCCACCCGAAGCTCTCAGATTTTGGTCTTGCAAGGGAAGGGCCACAAGGGGATCAGACTCATGTATCTACTGCGGTAGTTGGGACACAAGGATATGCCGCGCCGGAGTATATTGAAACAGGTCATCTCAAAGTCCAGAGTGACATGTGGAGTTTTGGGGTCGTACTCTACGAAATCCTCACAGGAAGACGATCATTAGAAAGAAATCGTCCAACAGCTGAACAGAAACTACTAGATTGGGTTAAACAGTATCCTGCTGACAGTAACAGATTCAGCATAATTATGGACCAGCGACTTAGGAACCAATATCCGATCGCTGCAGCTCGCAAAATAGCAAAGATAGCTGATAGTTGCTTGAAGAAGAATCCAGAAGATAGACCAACTATGAATCAGATAGTGGAAGGGTTGAAACAAGCATTGGAATATTCAGAAATGTCAAACACTCCTCACGATAATGCTGAATCGTCTCGGTCTAAATTGGTTCAGAGAAGTAAATAG 1140 0.4088 MKCFFFKEKSKSAPELQNKKKNKNPAFNRATNSTGSISSPRSVKDLYREKEHSFRVFTLHELRDATNGFNRMLKIGEGGFGSVYKGSILPPNGQGDPIIVAIKRLNTRGFQGHKEWLAEVQFLSIVNHPNLVKLLGYCSVDGERGIQRLLVYEFMPNRSLENHLFSKTLPTLPWKTRLEIMLGAAEGLAYLHEGLEIQVIYRDFKSSNVLLDEDFHPKLSDFGLAREGPQGDQTHVSTAVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEILTGRRSLERNRPTAEQKLLDWVKQYPADSNRFSIIMDQRLRNQYPIAAARKIAKIADSCLKKNPEDRPTMNQIVEGLKQALEYSEMSNTPHDNAESSRSKLVQRSK* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2564 379 SUPERFAMILY Protein kinase-like (PK-like) 51 349 IPR011009 -
Tpr5g2564 379 PANTHER OS01G0588500 PROTEIN-RELATED 16 376 - -
Tpr5g2564 379 MobiDBLite consensus disorder prediction 19 41 - -
Tpr5g2564 379 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL20-RELATED 16 376 - -
Tpr5g2564 379 Gene3D Phosphorylase Kinase; domain 1 49 154 - -
Tpr5g2564 379 Gene3D Transferase(Phosphotransferase) domain 1 155 376 - -
Tpr5g2564 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Tpr5g2564 379 ProSiteProfiles Protein kinase domain profile. 69 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2564 379 Pfam Protein tyrosine and serine/threonine kinase 74 349 IPR001245 GO:0004672|GO:0006468
Tpr5g2564 379 ProSitePatterns Protein kinases ATP-binding region signature. 75 103 IPR017441 GO:0005524
Tpr5g2564 379 MobiDBLite consensus disorder prediction 357 379 - -
Tpr5g2564 379 CDD STKc_IRAK 75 352 - -
Tpr5g2564 379 MobiDBLite consensus disorder prediction 14 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2564 Tpr-Chr5 47680175 47683505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2564 3 350 Glycoside Hydrolase AT3G07070 42.458 4.02e-91 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr5g2564 PK_Tyr_Ser-Thr 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2564 - K00924 gmx:100305403 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2564 5 47680175 47683505 Tpr5g2564 5 47680175 47683505 ECH
Tpr2g5573 2 64451262 64454245 Tpr5g2564 5 47680175 47683505 PCT