Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2559 ATGACTTACAAATCATTAGAAGAAGCAGTAAGTTGCACCCAAACTGATCAAATAGAAGAAGCAAGTTGCACCGAAACTCAACAATCCTCTAAAATAGAAGAAGTATGTGGTGCAATACTCTTACTTTTGGTATTGGTACTATTTATTGGCATTCCTAATATTGTCACATTTAACAGTGAGCCGCCTCGAACCAAGTTCACCATAGCTGACGCCTCAATCGTGCATTTTAACCTCGCAAGCAACAACACCTTATATTATAATTTTAGGGTCACCATTGCAGCAAAAAACTTCCAAAACTACATAAAATCTTATGATAAGGCTACCGCAATTGCTTCGTATAAAGATAATCAATTAACTTCGGTGAAAATGGCACCATTTAAGTTAAGTAGTAAGAATACTGTTAGGCTAGAGCCTATAGTGTTTGAAGGAAATAATGTGATGATATTAGAGCCTCAACAACTTGCTAAGTATAATAAGGAGACACAATTGGAGATTTACAACTTAGATGTGGACTTAGATTTGGACTGCTATAAAGTTTATATTCATTGTCCAAGTTTAAGAGTTCCTTTGATTTCCAATGGTAAAGTAGCACCTACTTTCAATAGCACCACATGCTCGTACAAGGATGATAGGTGGTAA 639 0.3584 MTYKSLEEAVSCTQTDQIEEASCTETQQSSKIEEVCGAILLLLVLVLFIGIPNIVTFNSEPPRTKFTIADASIVHFNLASNNTLYYNFRVTIAAKNFQNYIKSYDKATAIASYKDNQLTSVKMAPFKLSSKNTVRLEPIVFEGNNVMILEPQQLAKYNKETQLEIYNLDVDLDLDCYKVYIHCPSLRVPLISNGKVAPTFNSTTCSYKDDRW* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2559 212 PANTHER HARPIN-INDUCED 1 41 207 - -
Tpr5g2559 212 PANTHER OS05G0367900 PROTEIN 41 207 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2559 Tpr-Chr5 47601702 47602340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2559 65 182 SNARE and Associated Proteins AT1G32270 31.933 4.83e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2559 - K05404 lja:Lj4g3v0630970.1 129.413