Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2554 ATGAAATTTCAATGGTTTTGGATGTATGCTGCCACTTTGTTGGCATGCTACATATTTGTTAACAAAGTTTTGAGGAATTTGAATGATTGGTATTATGATCTTAAGTTGAGAAAGAGACAATATCCACTTCCTCCTGGTGACATGGGATGGCCTTTAATTGGAAACCTTTGGCCCTTCTTCAAATATTTCTCATCCGGTCGCCGTGATATGTTCATCAACAACATTTTTCTCAGATATGGACGAACCGGTATCTACAAGACTCACTTGTATGGAAGTCCAAGCATCATAGTCACTACACCTGATATGTGCAAGAAAGTTCTAACTGATGAAGAGACCTTTAAGATGGGTTATCCAAAAGCCTTCATTTTAATACTAGCACCAAATAGGATATTAAGTGAACACGGACGCCTTAAAAGACTAGTCGCGGCTCCTATTGCCGGTCACAATGTGTCAGTAATGTACCTAGAGTGTATCAAAGATATTGTGATCAACAAGTTAGAAGAATTGTCTAACATGAGACGCCCTATCGAGTTCCTTAATGAGATGAGCAAAGCAGGTAAAAAGCTTGACAAAATAGTTCAATATATTATTGATGAAAGGAGAGTGAAGGCAAAAAATAGACAAATTGGGGAAAAGAATGATTTATTAGACATTCTTTTCGAAATCAAAGATAAAGGAGCTGAAAAATTCGAGGATAAGGACATTATTGACGTATTGGTATCATTTTTATTTGGTGGTCACGATTCAATTGCAGCCAGTATTATGTGGACAATTATGCATCTTACTCAAGATCCACTTTGTTTGAAAAAAGCCAAGGAAGAGCAAGAAGAAATCATGAAAGCAAGACCATCATCACAAAAACGACTAAGTAATGAGGAAATTAAAAACATGGTTTATCTTTCTCAGGTTGTTGATGAAACATTACGCTATAGATCTACCTTTTCAACTTTTCGAGAGGCAACGATTGATGTGAACATCAATGGTTATTTCATTCCAAAGGGATGGAAAGTGCTAGTTTGGCTAAGCGCTATGCATATGGCTCCAGAGCATTACTCAAATCCTGAAGAATATAATCCATCAAGATGGGATGATTATAATCCCGCAACAGGAAGCTTTCTTCCTTTCGGAATAGGTCGGCGGCTTTGTCCAGGAAGAGACTTAGCGAGATATGAAATGACCATATTTCTACATTATTTCGTCCTTAATTACCGGTTGGAGTTGATAAATCCAGAATGTCCACTTACTAGTTTGCCATTTCGTAAGCCAGTAGACAACTGTCTCGCTAAGGTCATAAAGCTCTCTGATTCTTAG 1311 0.376 MKFQWFWMYAATLLACYIFVNKVLRNLNDWYYDLKLRKRQYPLPPGDMGWPLIGNLWPFFKYFSSGRRDMFINNIFLRYGRTGIYKTHLYGSPSIIVTTPDMCKKVLTDEETFKMGYPKAFILILAPNRILSEHGRLKRLVAAPIAGHNVSVMYLECIKDIVINKLEELSNMRRPIEFLNEMSKAGKKLDKIVQYIIDERRVKAKNRQIGEKNDLLDILFEIKDKGAEKFEDKDIIDVLVSFLFGGHDSIAASIMWTIMHLTQDPLCLKKAKEEQEEIMKARPSSQKRLSNEEIKNMVYLSQVVDETLRYRSTFSTFREATIDVNINGYFIPKGWKVLVWLSAMHMAPEHYSNPEEYNPSRWDDYNPATGSFLPFGIGRRLCPGRDLARYEMTIFLHYFVLNYRLELINPECPLTSLPFRKPVDNCLAKVIKLSDS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2554 436 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Tpr5g2554 436 SUPERFAMILY Cytochrome P450 37 428 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2554 436 PANTHER CYTOCHROME P450 26 187 411 - -
Tpr5g2554 436 PANTHER CYTOCHROME P450 26 22 185 - -
Tpr5g2554 436 PRINTS P450 superfamily signature 245 262 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2554 436 PRINTS P450 superfamily signature 302 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2554 436 PRINTS P450 superfamily signature 373 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2554 436 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2554 436 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 375 384 IPR017972 GO:0005506|GO:0016705
Tpr5g2554 436 Gene3D Cytochrome P450 34 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2554 436 PANTHER CYTOCHROME P450 88D6 187 411 - -
Tpr5g2554 436 PANTHER CYTOCHROME P450 88D6 22 185 - -
Tpr5g2554 436 Pfam Cytochrome P450 171 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2554 436 PRINTS E-class P450 group I signature 234 251 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2554 436 PRINTS E-class P450 group I signature 254 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2554 436 PRINTS E-class P450 group I signature 340 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2554 436 PRINTS E-class P450 group I signature 372 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2554 436 PRINTS E-class P450 group I signature 382 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2554 Tpr-Chr5 47543943 47547253 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2554 13 432 Cytochrome P450 AT2G32440 40.126 6.06e-127 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2554 K04123 K17875 ag:BAG68929 536.569