Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2553 ATGGCTGAATTTGCTTCAAGCCTCATTCAAAGCTTGGGATCTGCTGCCTTACATGAATTTGCACGGATTAATGGTCTTAAGGATGAGTTGGAAAGGCTTAAGGAGCATGTTGAAACTTGTAAAGCTGTGCTGCTTGATCTTGACGGGAAACAAGAGCAAAGTCATGCTGAACAAAACTTAGTAACAAGGCTCAAAGATGTGCTTATTCCTGCAGATAACTTGCTAGATGAATTTGCTATTCAAGATATGATAAACAAAAGGGATCGAAACAAACTAAAAAAGGTACTTCATCCTTACTCTCTAAAAAAATTAGACATGGCTCATGAGATTGAAAAAATACAAAAAAAATTTGATGATGTGGAGAAATATATGTTTGGATTGAATCTAAACCTAAATGTTAGTGCGGTTGAGAAAACTAACAGTGAATGGAGGGAAACTGGTTCTTATGTGCAAGAATCAGAAATAATTGGAAGAGATGATGACAAAGAGAATATTATAAGCTTGTTGAGACAGTCACATGGAGATCCAAATGTCTCTTTCGTTGCTATTGTTGGGATTGGTGGTATGGGAAAGACAACTCTTGCTCAGTTGGTGTATAGTGACGAAAAAGTGCAAAATTTGTTTGAAAAGAGTATGTGGGTATGTGTCTCTGATAACTTTGATGTCAAAACTATTTTGAAGAACATGTTGAAGTCATTATTACCTAAGGAAAAAATTGATGATACATTAACATTGGACAACTTGCAAAGTATGCTTCGTGACAATTTAAATGGTAAGAGATACTTGTTAGTCCTAGATGACATTTGGAATGAGAGTTCTGAAAAGTGGGATAAATTGAGGACTAACTTGATGTGCGGTGCTCGAGGTAGTAAGGTTGTAGTGACAACTCGAAGTACAATAGTGGCACATAGAATGGGTGTAAAGGATCCATATGTTTTGAGTGGTTTGATTCCAGAAAAATCTTGGAGTTTATTAAAGAAGATTGCATTTGGGGATGATACCATTCAAGTGGATCAAAAAATTGAATCAGTTGGTAAGGAGATAGCAGAAAAGTGCAAAGGAGTTCCATTAGCAATAAGATCATTGGGAAGTATATTAAAGGGTAAAAGTGAAGAAAAGGAATGGAATGATGTCTTACGAGGTGATTTTTGGAAATTGTGTGAGGATAAAGATAGCATCTTGCCGGTTCTAAAATTGAGTTACAATAACTTATCGCCTCAACAAAGACAATGTTTTGCTTATTGCTCTTTGTTTCCTAAGGATTGGGAATTTGAGAAGGATGAGTTGGTTCAAATGTGGATGGCACATGGTTATCTTGATTGTCCGGTGGAAGGGAAATGCATTGAAGATGTTGGTAATCAATTCATTAATATTTTTTTGATGAAATCATTCTTCCAAGAACCAAAATGGAATGAAGATGGTGATTTAATTGGTTTTAAAATGCACGATTTAATGCACGATCTAGCAAAACAAGTAGCCGGTGACGATTGTTGTTACTTGTTGGATAATAAGGCAAAAGGATGTCTAGGAAGTCCTATGCATGTATGGGTTGAATTTGATGCATTATATTTGTTAGGATCGTTGGATGCTAGTAGGTTACGAACCTTGATTGTGGCTTTTCCCAATGTCTATGATTTTATGGACAGAGAGAAACAACATTCACTTATTTCAAGGTTCAAATACTTGCGTGTCTTTAAGTTGTGCGATGATCTTTATATTGAGCTATATGTTTCAATTGAAAAATTGAATCATTTAAGATTTCTTAAATTATCTTTGACTTGTACACTAAAAAAATTTCACAAGTCGATAAGAAATCTTGTTTGTTTACAAACCATAGAAGTGAGTTTGGATCCAAAAATTGTACTTTCTACAAAAGTTGTCTCAAAATTAATCAATTTGAGACGTCTTTATATATGTCAATGCACCTTCAGAGACAAGACACCAGTTGGATTTGGAAAATTGAGCATACCACAACATAGGGGTGTAAATTTTTCCAAATGGCTTTCTCCTCTCACAAATATTATTGAAATATCTCTTACTTTTTGTCAAGGTTTCAAATATCTCCCACCTTTGGAAGGTCTTCTGTCCCTCAAGTCACTTTACTTAAGTAACCTTGATGATTTGGAGTACATATATTACGAAGTGCCTACCCATGAGCCATTCTTCCCATCTTTGAAGAGATTAGATATCTGGGACTGTTACAACCTGGTGGGATGGAAGAGGAAGGGAGATGATTTCAATGATATTAACACTTCATCACATCATCTTTTCTTGCCTCAATTTCCTTGTCTATCTTATCTGAAAATTTCTGAGTGCCCAATGTTGACTCACATGCCTACTTGTCCAAACATTAAGAAATTATCATTGCAACTGGTGTTTCCTACATGGGAAGAAACGCTAAATATAGCACCGTCACAATGCTCACTCAGTTGCACTCCTCTTTCCTTGCAAATTAATTTGAAAAACGTCTCACAATATTGGTGGCAAAATCTTACTTCTCTCGAGAATCTTAAATTTGTGTGTTTTTCAAGTCAACAATTTCAAGCAATTGAAATCTGGTTGTTTAAGGAAGACTTCAACTATCTTCCTTCATTGCGAAATATTCAATTTCACTATTGTAACCGAATAAAGGCATTGCCAGATTGGATATGCAAAATCTCATCACTTCAGCATATCACGATAGAGGATTGCGATCAATTGACATTGCTGCCTGAAGGAATGACACGTCTTACCAACTTACATACCTTGGAAATCATTAGATGTCGACTCTTAATTGAAGAATGTCAGAAAGAAACAAGTGCAACTCGGCCTACAATTGCACACATCCCAAACATAATCATCAAAAGTGATTGGAATTAG 2859 0.3561 MAEFASSLIQSLGSAALHEFARINGLKDELERLKEHVETCKAVLLDLDGKQEQSHAEQNLVTRLKDVLIPADNLLDEFAIQDMINKRDRNKLKKVLHPYSLKKLDMAHEIEKIQKKFDDVEKYMFGLNLNLNVSAVEKTNSEWRETGSYVQESEIIGRDDDKENIISLLRQSHGDPNVSFVAIVGIGGMGKTTLAQLVYSDEKVQNLFEKSMWVCVSDNFDVKTILKNMLKSLLPKEKIDDTLTLDNLQSMLRDNLNGKRYLLVLDDIWNESSEKWDKLRTNLMCGARGSKVVVTTRSTIVAHRMGVKDPYVLSGLIPEKSWSLLKKIAFGDDTIQVDQKIESVGKEIAEKCKGVPLAIRSLGSILKGKSEEKEWNDVLRGDFWKLCEDKDSILPVLKLSYNNLSPQQRQCFAYCSLFPKDWEFEKDELVQMWMAHGYLDCPVEGKCIEDVGNQFINIFLMKSFFQEPKWNEDGDLIGFKMHDLMHDLAKQVAGDDCCYLLDNKAKGCLGSPMHVWVEFDALYLLGSLDASRLRTLIVAFPNVYDFMDREKQHSLISRFKYLRVFKLCDDLYIELYVSIEKLNHLRFLKLSLTCTLKKFHKSIRNLVCLQTIEVSLDPKIVLSTKVVSKLINLRRLYICQCTFRDKTPVGFGKLSIPQHRGVNFSKWLSPLTNIIEISLTFCQGFKYLPPLEGLLSLKSLYLSNLDDLEYIYYEVPTHEPFFPSLKRLDIWDCYNLVGWKRKGDDFNDINTSSHHLFLPQFPCLSYLKISECPMLTHMPTCPNIKKLSLQLVFPTWEETLNIAPSQCSLSCTPLSLQINLKNVSQYWWQNLTSLENLKFVCFSSQQFQAIEIWLFKEDFNYLPSLRNIQFHYCNRIKALPDWICKISSLQHITIEDCDQLTLLPEGMTRLTNLHTLEIIRCRLLIEECQKETSATRPTIAHIPNIIIKSDWN* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2553 952 SUPERFAMILY RNI-like 754 925 - -
Tpr5g2553 952 SUPERFAMILY L domain-like 465 791 - -
Tpr5g2553 952 PANTHER DISEASE RESISTANCE PROTEIN RP 31 791 IPR044974 GO:0006952
Tpr5g2553 952 CDD RX-CC_like 4 120 IPR038005 -
Tpr5g2553 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 415 IPR027417 -
Tpr5g2553 952 Gene3D - 137 309 IPR027417 -
Tpr5g2553 952 Gene3D - 5 111 - -
Tpr5g2553 952 PRINTS Disease resistance protein signature 180 195 - -
Tpr5g2553 952 PRINTS Disease resistance protein signature 255 269 - -
Tpr5g2553 952 PRINTS Disease resistance protein signature 352 366 - -
Tpr5g2553 952 PRINTS Disease resistance protein signature 908 924 - -
Tpr5g2553 952 PANTHER OS05G0414200 PROTEIN 31 791 - -
Tpr5g2553 952 Coils Coil 23 43 - -
Tpr5g2553 952 Gene3D Ribonuclease Inhibitor 800 938 IPR032675 -
Tpr5g2553 952 Gene3D Ribonuclease Inhibitor 542 799 IPR032675 -
Tpr5g2553 952 Pfam NB-ARC domain 159 403 IPR002182 GO:0043531
Tpr5g2553 952 Gene3D - 401 492 IPR036388 -
Tpr5g2553 952 Gene3D - 316 400 IPR042197 -
Tpr5g2553 952 Pfam Rx N-terminal domain 5 88 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2553 Tpr-Chr5 47535421 47539417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2553 177 457 WRKY Transcription Factor Family AT5G45050 26.645 1.20e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2553 - - mtr:MTR_8g027540 1098.19