Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2541 ATGGCTTTCCTAAGTCATAACATAAATCACTTGTTCATTACTTTCCTCATATTTTGTACCTTTTATTCATGTTATAGTTCAGCCAACGACACAATTACATCATCCAAATCACTCAATGACCAAGGGACAATAACCTCAAACAACACAAATTTTAACCTAGGATTTTTCAGTCCAATAAATTCAACAAACCGTTACCTAGGAATTTGGTACATCAATGAAACCAACAACATATGGATTGCAAACAGAGATCAGCCTCTTAAAGATTCATCAGGATTAGTCACAATTGACAAATATGGTAATCTTGTAATATTGAACAGTCAAAATGGTATCATCATTTGGACAACAAATATTTCAAATATTTCAAGAAATTCAACAGCTCAACTTAATGATTTAGGAAACTTGATTCTAAGAGACATCAATTCTGGAGAAACAATTTGGGATAGTTTCTCACACCCTACAGATGCAGGTGTTCCAACCATGAGAATTGCTGCGAACAAAGTAACACATGAGAAAATAGCTTTTGTATCATGGAAAAGTGAAAATGATCCTTCTTCAGGACATTTTTCAGCTAGTCTTGAAAGATTGGATGCACCAGAAATTTTTATTTGGCATGATAAAAATATTCATTGGAGAACTGGTCCATGGAATGGAACGGTTTTTCTCGGATCGCCAAGAATGTTAACGGAGTATTTATTCGGTTGGGCATTAAATCCCGATGATGGTGATGGAACTGCTTATTTAACTTACGATTTCGCCGACAAAACTAAGTTTGGAATTCTCTCATTGACATACCATGGAACACTTAAGTTGGTTGAGTATATTAATAAAACAGAATTTCTTAGTTTTGAGATTGATCAAAATGAGTGTGACTTTTACGGAAAATGTGGGCCATTTGGGAGTTGTGATAATTCTAGTGTACCAATTTGTAGTTGTTTTGAAGGGTTTGAGCCAAAGAATTTGGTGGAATGGAGTTTAAGTAATTGGACTAATGGTTGTGTGAGGAAAAAAGGATTTAACTTGAAGTGTGAGATTTTGAAGAATGGATCAAGTGATGTTAAACAAGATGGTTTTTCTGTGAAACATAATATGAAAGTTCCAGATTTTATTGAAAGATCAGTTGGTAATCAAAATCAGTGTGAAACAGATTGTTTGGAAAATTGTTCTTGTTTGGCACATGCATATGATCCTTATATAGGTTGTATGTATTGGAGTGGAGATTTAATTGATTTGCAGAAATTTTCTTACGGAGGAGTTGATCTCTTCATTCGTGTACCGGCAGAACTAGCTACAGTTGCAGATAATAAAAAGAAAAAAGGGCTCAACAAGAGTTTAATAATCATTCCTATTGTTGGAGGGATAGGAGCACTTACATTTGTTATATGTGCTTATCTTTTGTGGAGGAAGTGTTCTGCTAGACATAAAGAAGGACAGCCTCAAAACTCGATTATGAGAGGACAAAAACAAATGAAATTGGATGAACTACCACTATATGATTTTAAAAAGCTCGAAACTGCCACAAACAATTTTCACATTGATAACATGCTTGGGAAGGGAGGTTTTGGCCCAGTATACAAGGGAATAATGGAAGATGGCCACGAAATTGCGGTGAAAAGACTCTCAAAAGCATCTGGACAAGGAATAGAAGAATTCATGAATGAAGTATTAGTGATTTCAAAACTTCAACATCGCAATCTTGTAAGACTTATGGGTTGTTGCGTTGAAAGGGGCGAGCAAATGTTGGTTTATGAGTTCATGCCAAATAAGAGTTTGGATGCCTTTCTCTTTGATCCACTACAAAAGAGAATTTTAGATTGGAGAAAGAGATCAAACATAATCGAAGGAATAGCTCGAGGTATACTCTATCTTCATAGAGACTCGAGACTAAGGATCATACATAGAGATTTGAAAGCAAGCAACATCTTACTTGATGGTAACATGATTCCAAAAATATCAGACTTTGGTTTAGCTAGAATTGTTAAAGGTGGAGAAGAAGATGATGAAGCTAACACAAAGAGAGTTGTTGGAACATATGGTTATATGCCGCCTGAATATGCAATGGAGGGACTTTTCTCTGAGAAATCAGATGTCTATAGTTTTGGGGTTTTATTGCTAGAGATTGTTAGCGGAAGGAGAAATAGTAGCTTTTATCACCACGAGGATTCTCTTAGTCTTGTAGGCTTTGCATGGAAGCTATGGTTAGAGGACAACATTAGATCTCTAATAGATCCAGAAGTATGGGATCCATGCTTTGAGAGCAGCATGTTGAGGTGCATACACATAGGACTTCTATGTGTGCAAGAACTTCCAAGAGAAAGACCAAATATATCAACTGTTGTTTTGATGCTTATAAGTGAGATTACACATCTTCCTCCTCCAGGGAAAGTTGCATTTGTTTACAAGCAAAATCCAAGAAGTACACAATCTTCTCAAAAAAGTCATCAATCTACCTCAAACAACAATGTAACTCTGAGTGAAGTTCAAGGCAGATAA 2490 0.3578 MAFLSHNINHLFITFLIFCTFYSCYSSANDTITSSKSLNDQGTITSNNTNFNLGFFSPINSTNRYLGIWYINETNNIWIANRDQPLKDSSGLVTIDKYGNLVILNSQNGIIIWTTNISNISRNSTAQLNDLGNLILRDINSGETIWDSFSHPTDAGVPTMRIAANKVTHEKIAFVSWKSENDPSSGHFSASLERLDAPEIFIWHDKNIHWRTGPWNGTVFLGSPRMLTEYLFGWALNPDDGDGTAYLTYDFADKTKFGILSLTYHGTLKLVEYINKTEFLSFEIDQNECDFYGKCGPFGSCDNSSVPICSCFEGFEPKNLVEWSLSNWTNGCVRKKGFNLKCEILKNGSSDVKQDGFSVKHNMKVPDFIERSVGNQNQCETDCLENCSCLAHAYDPYIGCMYWSGDLIDLQKFSYGGVDLFIRVPAELATVADNKKKKGLNKSLIIIPIVGGIGALTFVICAYLLWRKCSARHKEGQPQNSIMRGQKQMKLDELPLYDFKKLETATNNFHIDNMLGKGGFGPVYKGIMEDGHEIAVKRLSKASGQGIEEFMNEVLVISKLQHRNLVRLMGCCVERGEQMLVYEFMPNKSLDAFLFDPLQKRILDWRKRSNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDGNMIPKISDFGLARIVKGGEEDDEANTKRVVGTYGYMPPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNSSFYHHEDSLSLVGFAWKLWLEDNIRSLIDPEVWDPCFESSMLRCIHIGLLCVQELPRERPNISTVVLMLISEITHLPPPGKVAFVYKQNPRSTQSSQKSHQSTSNNNVTLSEVQGR* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2541 829 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Tpr5g2541 829 PIRSF SRK 2 829 IPR024171 GO:0004674
Tpr5g2541 829 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 19 828 - -
Tpr5g2541 829 SMART ntp_6 352 424 IPR003609 -
Tpr5g2541 829 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Tpr5g2541 829 Pfam D-mannose binding lectin 77 178 IPR001480 -
Tpr5g2541 829 SMART serkin_6 509 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2541 829 Pfam PAN-like domain 353 410 IPR003609 -
Tpr5g2541 829 MobiDBLite consensus disorder prediction 805 829 - -
Tpr5g2541 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 217 IPR036426 -
Tpr5g2541 829 Gene3D - 23 151 IPR036426 -
Tpr5g2541 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Tpr5g2541 829 CDD PAN_AP_plant 347 425 - -
Tpr5g2541 829 CDD STKc_IRAK 515 782 - -
Tpr5g2541 829 Pfam Protein tyrosine and serine/threonine kinase 510 778 IPR001245 GO:0004672|GO:0006468
Tpr5g2541 829 ProSiteProfiles Protein kinase domain profile. 509 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2541 829 SMART blect_4 29 152 IPR001480 -
Tpr5g2541 829 SUPERFAMILY Protein kinase-like (PK-like) 494 815 IPR011009 -
Tpr5g2541 829 Gene3D Transferase(Phosphotransferase) domain 1 585 788 - -
Tpr5g2541 829 CDD B_lectin 35 152 IPR001480 -
Tpr5g2541 829 Gene3D Phosphorylase Kinase; domain 1 483 584 - -
Tpr5g2541 829 ProSiteProfiles Bulb-type lectin domain profile. 29 149 IPR001480 -
Tpr5g2541 829 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2541 Tpr-Chr5 47389112 47394242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2541 438 797 Receptor kinase-like Gene Family AT4G23230 53.186 5.66e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr5g2541 PK_Tyr_Ser-Thr 4.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2541 - - mtr:MTR_8g013600 1291.56