Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2531 ATGCCAACATTATCCATCCTTGATCTTTCCAACAATTCGTTGACCGGTCATATACCTGAAAACTTTGGTTCATCACCAGCTCTTGAAGCATTTAATGTCTCATACAACAAGCTTGAAGGTTCTGTACCAGAAAATGGTATGCTGAGAACTCTAAACCCGAATAATCTCGTCGGAAATGATGGCCTATGTGGTGGTATCCTCTCTTCATGTGATCAAAACTCAGCATACTCCTCGAGGCATGAAAGTTCACATGAAAAGCGCATTATCACAGGATGGATAATTGGAATATCATCAATTCTAGCCATTGGAATTACAATTTTGGTAGCAAGGTCTTTATATGTAAGGTGGTACACCGGCGGTTTTTGCTTCAGAGAGAGATTTTATAAAGGTAGCAAAGGGTGGCCATGGAGATTGATGGCATTTCAGAGACTTGGTTTTACAAGTTCAGACATTCTAGCTTGTATCAAGGAAACAAATGTGATTGGAATGGGAGGTACCGGCGTTGTTTACAAGGCCGAGGTACCGCATTCTAACACAGTTGTGGCAGTGAAAAAGTTGTGGAGATCAGGAAATGATGTTGAAGTAGGAGGAGGAGGAGGCGGTGATGAACTTGTTGGAGAGGTGAACCTGTTAGGAAGATTAAGGCATAGAAACATTGTTAGATTATTAGGATTTCTTTATAATGACACTGATTTGATGATAGTTTATGAATTTATGCCTAATGGAAACCTTGGAGATGCCTTGCATTGTAAGCAAACAGTTAGACAGCTTGTGGATTGGGTTTCGAGATACAATATAGCTTTAGGAGTTGCTCAAGGACTTGCTTATCTTCACCATGACTGTTATCCGCCGGTTATTCATCGCGACATTAAGTCAAATAATATACTTCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGATTGGCCAAGATGATGGTCCGTAAGAACGAAACCGTCTCCATGGTTGCCGGTTCCTATGGCTACATTGCTCCTGAATATGGCTATGCATTGAAGGTGGATGAAAAGATTGATGTATACAGTTACGGAGTAGTTTTATTCGAGCTTCTGACAGGAAAGAGGCCGCTTGATGAAGAATTTGGAGAAAGTGTAGACATTGTAGAATGGATTAGAAGGAAGATTAGAGATAACAAATCTCTAGAAGAAGCATTAGATCAAAGCGTAGGAAACAGCAGACATGTTATAGAAGAGATGCTTTTAGTTTTAAGAATAGCAGTTATTTGCACTGCTAAGCTTCCTAAGGAAAGACCAAGTATGAGAGATGTGATAATGATGCTTGGAGAGGCAAAGCCTAGAAGAAAAATCAGTGGCAACAATGAAACATCTTTAGCAGCTAACAACATTAATAACAAGGAGATGTCAGTTTTTAGCACATCACCAGTTAGTGGCCTTCTTTAG 1422 0.3994 MPTLSILDLSNNSLTGHIPENFGSSPALEAFNVSYNKLEGSVPENGMLRTLNPNNLVGNDGLCGGILSSCDQNSAYSSRHESSHEKRIITGWIIGISSILAIGITILVARSLYVRWYTGGFCFRERFYKGSKGWPWRLMAFQRLGFTSSDILACIKETNVIGMGGTGVVYKAEVPHSNTVVAVKKLWRSGNDVEVGGGGGGDELVGEVNLLGRLRHRNIVRLLGFLYNDTDLMIVYEFMPNGNLGDALHCKQTVRQLVDWVSRYNIALGVAQGLAYLHHDCYPPVIHRDIKSNNILLDANLEARIADFGLAKMMVRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLFELLTGKRPLDEEFGESVDIVEWIRRKIRDNKSLEEALDQSVGNSRHVIEEMLLVLRIAVICTAKLPKERPSMRDVIMMLGEAKPRRKISGNNETSLAANNINNKEMSVFSTSPVSGLL* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2531 473 Pfam Protein kinase domain 157 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2531 473 SUPERFAMILY Protein kinase-like (PK-like) 152 434 IPR011009 -
Tpr5g2531 473 ProSitePatterns Protein kinases ATP-binding region signature. 161 185 IPR017441 GO:0005524
Tpr5g2531 473 ProSiteProfiles Protein kinase domain profile. 155 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2531 473 Gene3D Transferase(Phosphotransferase) domain 1 239 461 - -
Tpr5g2531 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Tpr5g2531 473 SUPERFAMILY L domain-like 1 64 - -
Tpr5g2531 473 SMART serkin_6 155 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2531 473 PANTHER UNNAMED PRODUCT 1 447 - -
Tpr5g2531 473 Gene3D Ribonuclease Inhibitor 1 78 IPR032675 -
Tpr5g2531 473 Gene3D Phosphorylase Kinase; domain 1 146 238 - -
Tpr5g2531 473 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2531 Tpr-Chr5 47304991 47308728 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2531 1 473 Receptor kinase-like Gene Family AT1G08590 57.938 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr5g2531 Pkinase 3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2531 - - gmx:100811284 768.844