Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2528 ATGACTTCCAATATTTGTCTCCACATGTTGTTCTATTATATCATAAGCCTTCACATCGTTTCTACATTGGCTCACTCTGATAATTATATCATTCACATGAATTTATCAGCTATGCCAACGATATTCTTAAATCAACATAGTTGGTATGAATCCACTCTTTCTCAAGTTACTCCTACAAATAATAATTTCAATGAGTCTACATCTTCTAAAATCATTTATACATACAACAATGTTATGAATGGTTTTAGTGCAAATCTATCACCTGAAGAGCATGAAGCTCTCAAAATCTCCCCTGGTTACATTTCATCAATACCGGATTTATCCTTGAAGCTTGACACAACACACTCACCTAAATTCCTTGGTCTTAATCCCTACAAAGGGGCATGGCCAGCCTCTGATTTTGGCAAAGATGTCATTGTTGGTGTGATTGACACGGGTGTTTGGCCAGAAAGTGAAAGTTTCAATGATAAGGGAATGACTAAAATGCCTTCAAATTGGAAAGGCCAATTATGTCAATTTGAAAATACCAACAATTCATCTTTGTGCAACAAGAAACTCATTGGAGCCAGGTACTTTAACAAGGGATTCTTGGCGAAATATCCAAACATTAGTAGAACAATTGTTAACACGACACGTGACACATCCGGTCATGGGACCCACACTTCATCAATAGCAGCTGGAAGTAGAGTAGATGGTGCATCTTTCTTTGGTTTTGCAAATGGAACAGCAATGGGAATAGCTTCATTGTCTAGAGTAGCCATGTACAAGGCTGTGTGGGGACCAAATGAAGATATGGTTGTATCAGATATAATAGCTGCAATTGATACCGCAATATCAGATGGTGTTGATGTTCTTTCAATGTCATTTAGCTATGACAATGTGCCTTTGTATAAAGATGGTATTGCCATAGCAACATTTGCAGCTATGGAAAAAGGTATTTTTGTGTCTGCATCAGCAGGTAACGATGGACCTTCCTTTAATACTATGAAGAGCAATGGAATACCATGGGAGACAATTGTTGCTGCTAGTACTTTAGATCGCGAATTTCATGGAAATCTTACACTTGGTAATGGAGTCTCAGTCACTGGCTTCTCTATTTATCCTGGTAAATTCTCCACTAGCAATTTTCGAATTGTTTTCATGGGTATGTGTGACAATGTTAAAAAACTAATCAAAGTAAAGAGCAAGATTGTGGTTTGTGAATTTAACAATGGAACTTTTGATAATCTTGTAAAACCAATTCAGAATTTAATTGCAGCAAAAGTTGTTGGAAGTGTTCTCATAACAAACACATTACAAATTGATGAATTTTCATTGTCAAGTGCGATACCATTCCCATCTATCATTATTAACCCCAAAAATGGAGAGATTGTAAAAGATTTCATCAAGAGAACCTCTTACTCAAGTTCAATAGCAAAAATGTCTTTCAAGATAACATCTTTTGATGTTAGACCGGCGCCTAGTGTGGATATTTATAGTTCAAGAGGACCCTCAAAGAATTGTCCATATGTTTTGAAACCCGACATTACAGGTCCTGGTACATCAATCTTAGCAGCATGGCCCACAAATATTCCTGTGTTTGATTTTGTATCTTATAAATTCTTCAATAAGTTTAATATTGCAAGCGGAACATCTATGTCATGCCCTCATATTGCTGGTGTTGCGGCGCTTTTAAAAGGCGCGCATGGTGATTGGAGCCCTGCGGCTATCCGGTCGGCAATAATGACAACATCAGACATATTTGATAATACTAAGGAACATATCACAGACATTGGAACAGGTAACAAAGCAACACCTCTTGCATTAGGAGCTGGTCATGTTAATCCTAATAGAGCACTTGACCCTGGTCTTATTTATGATGCTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTACACACAAAAAAACATCATTGCCATTACAAGATCATCGGTTAATGATTGCTCTAAACCTTCATTAGATCTCAATTATCCTTCTTTTATTGCTTTTTTCAATGCTGGAAATTCTTCAAAGACAACCCAACATTTTCACAGAACAGTTACTAATGTTGGCGAAGGACAAACAACGTATGTTGCTAGCATTACACCAATTAAAAGGTTTCGTATCAACGTTATCCCAAATAAGTTGGTGTTCAAGAAGAAGAACCAGAAGATAAGCTACAAGTTGAGCATTGAAGGTCCAAGAATGATACAAAAGAATAAAGTATCTTTTGGATATCTTACTTGGAAGGATGACAAGCATGTAGTTAGGAGTCCTATTGTTGTAACCATCCCTAGTTTCAATTTGTAG 2298 0.3681 MTSNICLHMLFYYIISLHIVSTLAHSDNYIIHMNLSAMPTIFLNQHSWYESTLSQVTPTNNNFNESTSSKIIYTYNNVMNGFSANLSPEEHEALKISPGYISSIPDLSLKLDTTHSPKFLGLNPYKGAWPASDFGKDVIVGVIDTGVWPESESFNDKGMTKMPSNWKGQLCQFENTNNSSLCNKKLIGARYFNKGFLAKYPNISRTIVNTTRDTSGHGTHTSSIAAGSRVDGASFFGFANGTAMGIASLSRVAMYKAVWGPNEDMVVSDIIAAIDTAISDGVDVLSMSFSYDNVPLYKDGIAIATFAAMEKGIFVSASAGNDGPSFNTMKSNGIPWETIVAASTLDREFHGNLTLGNGVSVTGFSIYPGKFSTSNFRIVFMGMCDNVKKLIKVKSKIVVCEFNNGTFDNLVKPIQNLIAAKVVGSVLITNTLQIDEFSLSSAIPFPSIIINPKNGEIVKDFIKRTSYSSSIAKMSFKITSFDVRPAPSVDIYSSRGPSKNCPYVLKPDITGPGTSILAAWPTNIPVFDFVSYKFFNKFNIASGTSMSCPHIAGVAALLKGAHGDWSPAAIRSAIMTTSDIFDNTKEHITDIGTGNKATPLALGAGHVNPNRALDPGLIYDAGVQDYVNLLCALNYTQKNIIAITRSSVNDCSKPSLDLNYPSFIAFFNAGNSSKTTQHFHRTVTNVGEGQTTYVASITPIKRFRINVIPNKLVFKKKNQKISYKLSIEGPRMIQKNKVSFGYLTWKDDKHVVRSPIVVTIPSFNL* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2528 765 Gene3D - 630 760 - -
Tpr5g2528 765 Gene3D - 346 481 - -
Tpr5g2528 765 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Tpr5g2528 765 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Tpr5g2528 765 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Tpr5g2528 765 Pfam Subtilase family 135 586 IPR000209 GO:0006508|GO:0008236
Tpr5g2528 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 112 IPR037045 -
Tpr5g2528 765 CDD Peptidases_S8_3 109 579 IPR034197 -
Tpr5g2528 765 Pfam Fibronectin type-III domain 657 758 IPR041469 -
Tpr5g2528 765 SUPERFAMILY Subtilisin-like 111 617 IPR036852 GO:0004252|GO:0006508
Tpr5g2528 765 CDD PA_subtilisin_like 352 466 - -
Tpr5g2528 765 PANTHER PUTATIVE-RELATED 18 762 - -
Tpr5g2528 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 762 IPR045051 -
Tpr5g2528 765 Gene3D Peptidase S8/S53 domain 137 626 IPR036852 GO:0004252|GO:0006508
Tpr5g2528 765 ProSiteProfiles Serine proteases, subtilase domain profile. 119 613 - -
Tpr5g2528 765 Pfam Peptidase inhibitor I9 29 111 IPR010259 -
Tpr5g2528 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2528 Tpr-Chr5 47229532 47234872 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2528 7 748 Subtilisin-like Serine Gene Family AT5G67090 42.536 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2528 - - gmx:100786751 951.429