Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g2526 | ATGGCATTTCAGAGACTTGGTTTTACAAGTTCAGACATTCTAGCTTGTATCAAGGAAACAAATGTGATTGGAATGGGAGGTACCGGCGTTGTTTACAAGGCCGAGGTACCGCATTCTAACACAGTTGTGGCAGTGAAAAAGTTGTGGAGATCAGGAAATGATGTTGAAGTAGGAGGAGGAGGAGGCGGTGATGAACTTGTTGGAGAGGTGAACCTGTTAGGAAGATTAAGGCATAGAAACATTGTTAGATTATTAGGATTTCTTTATAATGACACTGATTTGATGATAGTTTATGAATTTATGCCTAATGGAAACCTTGGAGATGCCTTGCATTGTAAGCAAACAGTTAGACAGCTTGTGGATTGGGTTTCGAGATACAATATAGCTTTAGGAGTTGCTCAAGGACTTGCTTATCTTCACCATGACTGTTATCCGCCGGTTATTCATCGCGACATTAAGTCAAATAATATACTTCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGATTGGCCAAGATGATGGTCCGTAAGAACGAAACCGTCTCCATGGTTGCCGGTTCCTATGGCTACATTGCTCCTGAATATGGCTATGCATTGAAGGTGGATGAAAAGATTGATGTATACAGTTACGGAGTAGTTTTATTCGAGCTTCTGACAGGAAAGAGGCCGCTTGATGAAGAATTTGGAGAAAGTGTAGACATTGTAGAATGGATTAGAAGGAAGATTAGAGATAACAAATCTCTAGAAGAAGCATTAGATCAAAGCGTAGGAAACAGCAGACATGTTATAGAAGAGATGCTTTTAGTTTTAAGAATAGCAGTTATTTGCACTGCTAAGCTTCCTAAGGAAAGACCAAGTATGAGAGATGTGATAATGATGCTTGGAGAGGCAAAGCCTAGAAGAAAAATCAGTGGCAACAATGAAACATCTTTAGCAGCTAACAACATTAATAACAAGGAGATGTCAGTTTTTAGCACATCACCAGTTAGTGGCCTTCTTTAG | 1008 | 0.3968 | MAFQRLGFTSSDILACIKETNVIGMGGTGVVYKAEVPHSNTVVAVKKLWRSGNDVEVGGGGGGDELVGEVNLLGRLRHRNIVRLLGFLYNDTDLMIVYEFMPNGNLGDALHCKQTVRQLVDWVSRYNIALGVAQGLAYLHHDCYPPVIHRDIKSNNILLDANLEARIADFGLAKMMVRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLFELLTGKRPLDEEFGESVDIVEWIRRKIRDNKSLEEALDQSVGNSRHVIEEMLLVLRIAVICTAKLPKERPSMRDVIMMLGEAKPRRKISGNNETSLAANNINNKEMSVFSTSPVSGLL* | 336 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g2526 | 335 | ProSiteProfiles | Protein kinase domain profile. | 17 | 303 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr5g2526 | 335 | Pfam | Protein kinase domain | 19 | 292 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr5g2526 | 335 | SMART | serkin_6 | 17 | 296 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr5g2526 | 335 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 147 | 159 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr5g2526 | 335 | Gene3D | Phosphorylase Kinase; domain 1 | 8 | 100 | - | - | |
Tpr5g2526 | 335 | PANTHER | UNNAMED PRODUCT | 1 | 309 | - | - | |
Tpr5g2526 | 335 | ProSitePatterns | Protein kinases ATP-binding region signature. | 23 | 47 | IPR017441 | GO:0005524 | |
Tpr5g2526 | 335 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 296 | IPR011009 | - | |
Tpr5g2526 | 335 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 1 | 309 | - | - | |
Tpr5g2526 | 335 | Gene3D | Transferase(Phosphotransferase) domain 1 | 101 | 323 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g2526 | Tpr-Chr5 | 47194408 | 47196015 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr5g2526 | 1 | 335 | Receptor kinase-like Gene Family | AT1G08590 | 63.743 | 1.24e-143 | 429 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Tpr5g2526 | Pkinase | 1e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g2526 | - | - | gmx:100811284 | 553.518 |