Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2526 ATGGCATTTCAGAGACTTGGTTTTACAAGTTCAGACATTCTAGCTTGTATCAAGGAAACAAATGTGATTGGAATGGGAGGTACCGGCGTTGTTTACAAGGCCGAGGTACCGCATTCTAACACAGTTGTGGCAGTGAAAAAGTTGTGGAGATCAGGAAATGATGTTGAAGTAGGAGGAGGAGGAGGCGGTGATGAACTTGTTGGAGAGGTGAACCTGTTAGGAAGATTAAGGCATAGAAACATTGTTAGATTATTAGGATTTCTTTATAATGACACTGATTTGATGATAGTTTATGAATTTATGCCTAATGGAAACCTTGGAGATGCCTTGCATTGTAAGCAAACAGTTAGACAGCTTGTGGATTGGGTTTCGAGATACAATATAGCTTTAGGAGTTGCTCAAGGACTTGCTTATCTTCACCATGACTGTTATCCGCCGGTTATTCATCGCGACATTAAGTCAAATAATATACTTCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGATTGGCCAAGATGATGGTCCGTAAGAACGAAACCGTCTCCATGGTTGCCGGTTCCTATGGCTACATTGCTCCTGAATATGGCTATGCATTGAAGGTGGATGAAAAGATTGATGTATACAGTTACGGAGTAGTTTTATTCGAGCTTCTGACAGGAAAGAGGCCGCTTGATGAAGAATTTGGAGAAAGTGTAGACATTGTAGAATGGATTAGAAGGAAGATTAGAGATAACAAATCTCTAGAAGAAGCATTAGATCAAAGCGTAGGAAACAGCAGACATGTTATAGAAGAGATGCTTTTAGTTTTAAGAATAGCAGTTATTTGCACTGCTAAGCTTCCTAAGGAAAGACCAAGTATGAGAGATGTGATAATGATGCTTGGAGAGGCAAAGCCTAGAAGAAAAATCAGTGGCAACAATGAAACATCTTTAGCAGCTAACAACATTAATAACAAGGAGATGTCAGTTTTTAGCACATCACCAGTTAGTGGCCTTCTTTAG 1008 0.3968 MAFQRLGFTSSDILACIKETNVIGMGGTGVVYKAEVPHSNTVVAVKKLWRSGNDVEVGGGGGGDELVGEVNLLGRLRHRNIVRLLGFLYNDTDLMIVYEFMPNGNLGDALHCKQTVRQLVDWVSRYNIALGVAQGLAYLHHDCYPPVIHRDIKSNNILLDANLEARIADFGLAKMMVRKNETVSMVAGSYGYIAPEYGYALKVDEKIDVYSYGVVLFELLTGKRPLDEEFGESVDIVEWIRRKIRDNKSLEEALDQSVGNSRHVIEEMLLVLRIAVICTAKLPKERPSMRDVIMMLGEAKPRRKISGNNETSLAANNINNKEMSVFSTSPVSGLL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2526 335 ProSiteProfiles Protein kinase domain profile. 17 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2526 335 Pfam Protein kinase domain 19 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2526 335 SMART serkin_6 17 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2526 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Tpr5g2526 335 Gene3D Phosphorylase Kinase; domain 1 8 100 - -
Tpr5g2526 335 PANTHER UNNAMED PRODUCT 1 309 - -
Tpr5g2526 335 ProSitePatterns Protein kinases ATP-binding region signature. 23 47 IPR017441 GO:0005524
Tpr5g2526 335 SUPERFAMILY Protein kinase-like (PK-like) 17 296 IPR011009 -
Tpr5g2526 335 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 309 - -
Tpr5g2526 335 Gene3D Transferase(Phosphotransferase) domain 1 101 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2526 Tpr-Chr5 47194408 47196015 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2526 1 335 Receptor kinase-like Gene Family AT1G08590 63.743 1.24e-143 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr5g2526 Pkinase 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2526 - - gmx:100811284 553.518