Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2523 ATGACTTCCAATATTTGTCTCCACATGTTGTTCTATTATATCATAAGCCTTCACATCGTTTCTACATTGGCTCACTCTGATAATTATATCATTCACATGAATTTATCAGCTATGCCAACGATATTCTTAAATCAACATAGTTGGTATGAATCCACTCTTTCTCAAGTTACTCCTACAAATAATAATTTCAAGTCTACATCTTCTAAAATCATTTATACATACAACAATGTTATGAATGGTTTTAGTGCAAATCTATCACCTGAAGAGCATGAAGCTCTCAAAATCTCCCCTGGTTACATTTCATCAATACCGGATTTATCCTTGAAGCTTGACACAACACACTCACCTAAATTCCTTGGTCTTAATCCCTACAAAGGGGCATGGCCAGCCTCTGATTTTGGCAAAGATGTCATTGTTGGTGTGATTGACACGGGTGTTTGGCCAGAAAGTGAAAGTTTCAATGATAAGGGAATGACTAAAATGCCTTCAAATTGGAAAGGCCAATTATGTCAATTTGAAAATACCAACAATTCATCTTTGTGCAACAAGAAACTCATTGGAGCCAGGTACTTTAACAAGGGATTCTTGGCGAAATATCCAAACATTAGTAGAACAATTGTTAACACGACACGTGACACATCCGGTCATGGGACCCACACTTCATCAATAGCAGCTGGAAGTAGAGTAGATGGTGCATCTTTCTTTGGTTTTGCAAATGGAACAGCAATGGGAATAGCTTCATTGTCTAGAGTAGCCATGTACAAGGCTGTGTGGGGACCAAATGAAGATATGGTTGTATCAGATATAATAGCTGCAATTGATACCGCAATATCAGATGGTGTTGATGTTCTTTCAATGTCATTTAGCTATGACAATGTGCCTTTGTATAAAGATGGTATTGCCATAGCAACATTTGCAGCTATGGAAAAAGGTATTTTTGTGTCTGCATCAGCAGGTAACGATGGACCTTCCTTTAATACTATGAAGAGCAATGGAATACCATGGGAGACAATTGTTGCTGCTAGTACTTTAGATCGCGAATTTCATGGAAATCTTACACTTGGTAATGGAGTCTCAGTCACTGGCTTCTCTATTTATCCTGGTAAATTCTCCACTAGCAATTTTCGAATTGTTTTCATGGGTATGTGTGACAATGTTAAAAAACTAATCAAAGTAAAGAGCAAGATTGTGGTTTGTGAATTTAACAATGGAACTTTTGATAATCTTGTAAAACCAATTCAGAATTTAATTGCAGCAAAAGTTGTTGGAAGTGTTCTCATAACAAACACATTACAAATTGATGAATTTTCATTGTCAAGTGCGATACCATTCCCATCTATCATTATTAACCCCAAAAATGGAGAGATTGTAAAAGATTTCATCAAGAGAACCTCTTACTCAAGTTCAATAGCAAAAATGTCTTTCAAGATAACATCTTTTGATGTTAGACCGGCGCCTAGTGTGGATATTTATAGTTCAAGAGGACCCTCAAAGAATTGTCCATATGTTTTGAAACCCGACATTACAGGTCCTGGTACATCAATCTTAGCAGCATGGCCCACAAATATTCCTGTGTTTGATTTTGTATCTTATAAATTCTTCAATAAGTTTAATATTGCAAGCGGAACATCTATGTCATGCCCTCATATTGCTGGTGTTGCGGCGCTTTTAAAAGGCGCGCATGGTGATTGGAGCCCTGCGGCTATCCGGTCGGCAATAATGACAACATCAGACATATTTGATAATACTAAGGAACATATCACAGACATTGGAACAGGTAACAAAGCAACACCTCTTGCATTAGGAGCTGGTCATGTTAATCCTAATAGAGCACTTGACCCTGGTCTTATTTATGATGCTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTACACACAAAAAAACATCATTGCCATTACAAGATCATCGGTTAATGATTGCTCTAAACCTTCATTAGATCTCAATTATCCTTCTTTTATTGCTTTTTTCAATGCTGGAAATTCTTCAAAGACAACCCAACATTTTCACAGAACAGTTACTAATGTTGGCGAAGGACAAACAACGTATGTTGCTAGCATTACACCAATTAAAAGGTTTCGTATCAACGTTATCCCAAATAAGTTGGTGTTCAAGAAGAAGAACCAGAAGATAAGCTACAAGTTGAGCATTGAAGGTCCAAGAATGATACAAAAGAATAAAGTATCTTTTGGATATCTTACTTGGAAGGATGACAAGCATGTAGTTAGGAGTCCTATTGTTGTAACCATCCCTAGTTTCAATTTGTAG 2295 0.3682 MTSNICLHMLFYYIISLHIVSTLAHSDNYIIHMNLSAMPTIFLNQHSWYESTLSQVTPTNNNFKSTSSKIIYTYNNVMNGFSANLSPEEHEALKISPGYISSIPDLSLKLDTTHSPKFLGLNPYKGAWPASDFGKDVIVGVIDTGVWPESESFNDKGMTKMPSNWKGQLCQFENTNNSSLCNKKLIGARYFNKGFLAKYPNISRTIVNTTRDTSGHGTHTSSIAAGSRVDGASFFGFANGTAMGIASLSRVAMYKAVWGPNEDMVVSDIIAAIDTAISDGVDVLSMSFSYDNVPLYKDGIAIATFAAMEKGIFVSASAGNDGPSFNTMKSNGIPWETIVAASTLDREFHGNLTLGNGVSVTGFSIYPGKFSTSNFRIVFMGMCDNVKKLIKVKSKIVVCEFNNGTFDNLVKPIQNLIAAKVVGSVLITNTLQIDEFSLSSAIPFPSIIINPKNGEIVKDFIKRTSYSSSIAKMSFKITSFDVRPAPSVDIYSSRGPSKNCPYVLKPDITGPGTSILAAWPTNIPVFDFVSYKFFNKFNIASGTSMSCPHIAGVAALLKGAHGDWSPAAIRSAIMTTSDIFDNTKEHITDIGTGNKATPLALGAGHVNPNRALDPGLIYDAGVQDYVNLLCALNYTQKNIIAITRSSVNDCSKPSLDLNYPSFIAFFNAGNSSKTTQHFHRTVTNVGEGQTTYVASITPIKRFRINVIPNKLVFKKKNQKISYKLSIEGPRMIQKNKVSFGYLTWKDDKHVVRSPIVVTIPSFNL* 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2523 764 Pfam Peptidase inhibitor I9 29 110 IPR010259 -
Tpr5g2523 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Tpr5g2523 764 Pfam Subtilase family 134 585 IPR000209 GO:0006508|GO:0008236
Tpr5g2523 764 Gene3D - 629 759 - -
Tpr5g2523 764 Pfam Fibronectin type-III domain 656 757 IPR041469 -
Tpr5g2523 764 PANTHER PUTATIVE-RELATED 18 761 - -
Tpr5g2523 764 ProSiteProfiles Serine proteases, subtilase domain profile. 118 612 - -
Tpr5g2523 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 761 IPR045051 -
Tpr5g2523 764 Gene3D Peptidase S8/S53 domain 136 625 IPR036852 GO:0004252|GO:0006508
Tpr5g2523 764 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Tpr5g2523 764 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Tpr5g2523 764 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Tpr5g2523 764 CDD Peptidases_S8_3 108 578 IPR034197 -
Tpr5g2523 764 Gene3D - 345 480 - -
Tpr5g2523 764 CDD PA_subtilisin_like 351 465 - -
Tpr5g2523 764 SUPERFAMILY Subtilisin-like 110 616 IPR036852 GO:0004252|GO:0006508
Tpr5g2523 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 111 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2523 Tpr-Chr5 47114135 47116429 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2523 7 747 Subtilisin-like Serine Gene Family AT5G67090 42.593 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2523 - - gmx:100786751 947.577