Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2517 ATGATGACTTCCAATATTTGTCTCCACATGTTCTATTATATCACAAGCCTTCACATCATTTCTACATTGGCTCACTCTGATAATTATATCATTCACATGAATTTATCAGCTATGCCAACAATATTCTTAAATCAACATAGTTGGTATGAATCCACTCTTTCTCAAGTTACTCCTACCAATAATAATTTCAAGTCTACATCTTCTAAAATCATTTATACATACAACAATGTTATGAATGGTTTTAGTGCGAATCTATCACCTGAAGAGCATGAAGCTCTCAAAACCTCCCCTGGTTACATTTCATCAATACCAGATTTACCCTTGAAGCTTCATACAACACACTCACCTCAATTCCTTGGTCTTAATCCCTACAAAGGAGCATGGCCAGCCTCTGATTTTGGCAAAGATGTCATTGTTGGTGTGGTTGACACTGGTGTTTGGCCAGAAAGTGAAAGTTTCAATGATAAGGGAATGACTAAAATTCCTTCAAAATGGAAAGGTCAATTATGTCAATTTGAAAATACCAACAATTCATCTTTGTGCAACAAGAAACTCATTGGAGCCAGGTACTTTAACAAAGGATTATTGGCGAAATATCCAAACATTAGCAGAACAATTGTTAACACGACACGTGACACATTCGGTCATGGGACCCACACTTCATCAATAGCAGCTGGAAGTAGAGTAAATGGTGCATCTTTCTTTGGTTTAGGAAATGGAACAGCAACGGGAATAGCTTCATTGTCTAGAGTAGCCATATACAAGATTATGTGGGGAACAAATGAAGTTAATGTTGTATCTGATACATTAGCTGGAATTGATGCCGCAATATCCGACGGTGTTGATGTTCTTTCATTGTCAATAGGCGATGACAAAATTGTGCCTTTGTATGAAAATGTTATTTCTATAGCAACATTTGCAGCTATGGAAAAAGGTATCTTTGTGTCTGCATCAGCCGGTAACGGTGGACCTTCCTTTAATACTATGGACAATGGAATACCTTGGGTGACAACTGTTGCTGCTAGTACTTTAGATCGCGAATTTCATGGAAATCTTACACTTGGTAATGGAGTCTCAGTCACTGGCTTCTCTTGTTATCCTGCAAAAGTTGTTGGAAGTGTTCTCATAACTAACACATTACAAAATGATGAATTTTCACTCTCAAGTGCGATCCCATTCCCATCTATCATTATTAACCCCAAAAATGGAGAGATTGTAAAAGATTTCATCAAGAGAACCTCTTACTCAAGTTCAATAGCAAAAATGTCTTTTAAGATAACATCTTTTGATGTTAGACCGGCGCCTAGTGTGGATTTTTATAGTTCAAGAGGACCTTCAAAGAATTGTCCATATGTTTTGAAACCCGACATTACAGGTCCTGGTACATCAATCTTAGCAGCATGGCCCACAAATATTCCTGTGTTGGATTTTGTATCTTATAAATTCTTTAATAAGTTTAATATTTTATCCGGAACATCTATGTCATGCCCTCATATTGCTGGTGTTGCGGCGCTTTTAAAAGGTGTGCACGATGATTGGAGCCCTGCGGCCATTCGGTCGGCAATAATGACAACATCAGACATATTTGATAATACTAATGAACACATCAAAGACATTGGAACAGGTAACAAAGCAACACCTCTTGCATTGGGAGCTGGTCATGTTAATCCTAATAGAGCACTTGACCCTGGTCTTATTTATGATGCTGGTGTACAAGATTATGTTAATCTTCTTTGTGCACTTAACTTCACACAAAAAAACATCACTACCATTACAAGATCATCTGTTAATGATTGCTCTAAACCTTCATTAGATCTCAATTACCCTTCTTTTATTGCTTTTTTCAATGCTGGAAATTCTTCAAAGACAACCCAACATTTTCATAGAACAGTTACTAATGTTGGCGAAGGACAAACAACGTATGTTGCTAGCATTACACCAATTAAAAGGTTTCGCATCAATGTTATCCCAAATAAGTTGGTGTTCGAGAAGAAGAACCAGAAGATAAGCTACAGGTTGAGCATTGAAGGTCCAAGAATGATACAAAAGAATAAAATATCTTTTGGATATCTTACTTGGAAGGATGAGAAGCATGTAGTCAGGAGTCCTATTGTTGTAACCACCCCTAGTTTCAATTTGTAG 2142 0.3716 MMTSNICLHMFYYITSLHIISTLAHSDNYIIHMNLSAMPTIFLNQHSWYESTLSQVTPTNNNFKSTSSKIIYTYNNVMNGFSANLSPEEHEALKTSPGYISSIPDLPLKLHTTHSPQFLGLNPYKGAWPASDFGKDVIVGVVDTGVWPESESFNDKGMTKIPSKWKGQLCQFENTNNSSLCNKKLIGARYFNKGLLAKYPNISRTIVNTTRDTFGHGTHTSSIAAGSRVNGASFFGLGNGTATGIASLSRVAIYKIMWGTNEVNVVSDTLAGIDAAISDGVDVLSLSIGDDKIVPLYENVISIATFAAMEKGIFVSASAGNGGPSFNTMDNGIPWVTTVAASTLDREFHGNLTLGNGVSVTGFSCYPAKVVGSVLITNTLQNDEFSLSSAIPFPSIIINPKNGEIVKDFIKRTSYSSSIAKMSFKITSFDVRPAPSVDFYSSRGPSKNCPYVLKPDITGPGTSILAAWPTNIPVLDFVSYKFFNKFNILSGTSMSCPHIAGVAALLKGVHDDWSPAAIRSAIMTTSDIFDNTNEHIKDIGTGNKATPLALGAGHVNPNRALDPGLIYDAGVQDYVNLLCALNFTQKNITTITRSSVNDCSKPSLDLNYPSFIAFFNAGNSSKTTQHFHRTVTNVGEGQTTYVASITPIKRFRINVIPNKLVFEKKNQKISYRLSIEGPRMIQKNKISFGYLTWKDEKHVVRSPIVVTTPSFNL* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2517 713 Pfam Subtilase family 134 532 IPR000209 GO:0006508|GO:0008236
Tpr5g2517 713 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 111 IPR037045 -
Tpr5g2517 713 ProSitePatterns Serine proteases, subtilase family, serine active site. 491 501 IPR023828 -
Tpr5g2517 713 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 369 IPR045051 -
Tpr5g2517 713 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 368 709 IPR045051 -
Tpr5g2517 713 ProSiteProfiles Serine proteases, subtilase domain profile. 107 561 - -
Tpr5g2517 713 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.9 20 369 - -
Tpr5g2517 713 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.9 368 709 - -
Tpr5g2517 713 SUPERFAMILY Subtilisin-like 110 565 IPR036852 GO:0004252|GO:0006508
Tpr5g2517 713 Pfam Fibronectin type-III domain 605 706 IPR041469 -
Tpr5g2517 713 Gene3D - 578 709 - -
Tpr5g2517 713 Gene3D - 345 368 - -
Tpr5g2517 713 Pfam Peptidase inhibitor I9 29 111 IPR010259 -
Tpr5g2517 713 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Tpr5g2517 713 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Tpr5g2517 713 PRINTS Subtilisin serine protease family (S8) signature 490 506 IPR015500 -
Tpr5g2517 713 Gene3D Peptidase S8/S53 domain 407 577 IPR036852 GO:0004252|GO:0006508
Tpr5g2517 713 Gene3D Peptidase S8/S53 domain 136 344 IPR036852 GO:0004252|GO:0006508
Tpr5g2517 713 CDD Peptidases_S8_3 108 527 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2517 Tpr-Chr5 47015071 47017418 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2517 14 696 Subtilisin-like Serine Gene Family AT5G67090 42.432 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2517 - - gmx:100786751 882.863