Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2513 ATGACTTCCAATATTTGTCTCCACATGTTCTATTATATCACAAGCCTTCACATCATTTCTACATTGGCTCACTCTGATAATTATATCATTCACATGAATTTATCAGCTATGCCAACAATAATCTTAAATCAACATAGTTGGTATGAATCCACTCTTTCTCAAGTTACTCCTACCAATAATAATATCAAGTCTACATCTTCTAAAATCATTTATACATACAACAATGTTATGAATGGTTTTAGTGCAAATCTATCACCTGAAGAGCATGAAGCTCTCAAAATCTCCCCTGGTTACATTTCATCAATACCAGATTTATCCTTGAAGCTTGACACAACACACTCACCTAAATTCCTTGGTCTTAATCCCTACAAAGGGGCATGGCCAGCCTCTGATTTTGGCAAAGATGTCATTGTTGGGGTGGTTGATAGTGGTGTTTGGCCAGAAAGTGGAAGTTTCAATGATAAGGGAATGACTAAAATTCCTTCAAAATGGAAAGGTCAATTATGTCAATTTGAAAATACCAACAATTCATCTTTGTGCAATAAGAAACTCATTGGAGCCAGGTACTTTAACAAAGGATTCTTGGCGAAATATTCAAACATTAGTAGAACAATTGTTAACACGACACGTGACACATTCGGTCATGGGACCCACACTTCATCAATAACAGTTGGAAGTAGAGTAAATGGTGCATCTTTCTTTGGTTTAGGAAATGGAACAGCAACGGGAATAGCTTCATTGTCTAGAGTAGCCATATACAAGGCTGCGTGGGGAACAAGTGAAGTTATGTTTGTATCTGATATAATAGCTGCAATTGAAGCCGCAATATCAGATGGTGTTGATGTTCTTTCAATGTCATTTAGCTATGACAATGTGCCTTTGTATAAAGATGGTATTGCCATAGCAACATTTGCAGCTATGAAAAAAGGTATTTTTGTGTCTGCATCAGCCGGTAACGACGGACCTTCCTTTAATACTATGAGCAATGGAATACCATGGGTGACAACTGTTGCTGCTAGTACTTTAGATCGCGAATTTCATGGAAATCTTACACTTGGTAATGGAGTCTCAGTCACTGGAATCTCTTGTTATCCTGGTAAATTCTCCACTAGCAATTTTCCAATTGTTTTCATGGGTATGTGTGACAATGTTAAAAAACTAATCAAAGTAAAGAGCAAGATTGTGGTTTGTGAATTTAACAATGGAACTTCTGCTAATCTTGTGAAACCAATTCAGAATTTAATTGCAGCAAAAGTTGTTGGAAGTGTTCTCTTAACAAACACATTACAATTTGATGAATGTTCATTGTCAAGCGCGATCCCATTCCCATCTATCATTATTAACCCCAAAAATGGAGAGATTGTAAAAGATTTCATCAAGAGAACCTCTTACTCAAGTTCAATAGCAAAAATGTCTTTCAAGATAACATCTTTTGATGTTAGACCGGCGCCTAGTGTGGATTTTTATAGTTCAAGAGGACCTTCAAAGAATTGTCCATATGTTTTGAAACCCGACATTGCAGGTCCTGGTACATCAATCTTAGCAGCATGGCCCACAAATATTCCTGTGTTGGATTTTGTATCTTATAAATTCTTCAATAAGTTTAATATTTTATCCGGAACATCTATGTCATGCCCTCATATTGCTGGCGTTGCGGCGCTTTTAAAAGGTGCGCACGATGATTGGAGCCCTGCAGCCATTCGGTCGGCAATAATGACAACATCAGACATATTTGATAATACTAATGAACACATCAAAGACATTGGAACAGGTAACAAAGCAACACCTCTTGCATTGGGAGCTGGTCATGTTAATCCTAATAGAGCACTTGACCCTGGTCTTATTTATGATGCTGGTGTACAAGATTATGTTAATCTTCTTTGTGCAGTTAACTTCACACAAAAACACATCACTACCATTACAAGATCATCTGTTAATGATTGCTCTAAACCTTCATTAGATCTCAATTACCCTTCTTTTATTGCTTTTTTCAATTCTGGAAATTCCTCAAAGACAACCCAACATTTTCATAGAACAGTTACTAATGTTGGCGAAGGACAAACAACGTATGTTGCTAGCATTACACCAATTAAAAGGTTTCGTATCAACGTTATACCAAATAAGTTGGTGTTCAAGAAGAAGAATCAGAAGATAAGGTACAGGTTGAGCATTGAAGGTCCGAGAATGATACAAAAGAATAAAATATCTTTTGGATAA 2217 0.3663 MTSNICLHMFYYITSLHIISTLAHSDNYIIHMNLSAMPTIILNQHSWYESTLSQVTPTNNNIKSTSSKIIYTYNNVMNGFSANLSPEEHEALKISPGYISSIPDLSLKLDTTHSPKFLGLNPYKGAWPASDFGKDVIVGVVDSGVWPESGSFNDKGMTKIPSKWKGQLCQFENTNNSSLCNKKLIGARYFNKGFLAKYSNISRTIVNTTRDTFGHGTHTSSITVGSRVNGASFFGLGNGTATGIASLSRVAIYKAAWGTSEVMFVSDIIAAIEAAISDGVDVLSMSFSYDNVPLYKDGIAIATFAAMKKGIFVSASAGNDGPSFNTMSNGIPWVTTVAASTLDREFHGNLTLGNGVSVTGISCYPGKFSTSNFPIVFMGMCDNVKKLIKVKSKIVVCEFNNGTSANLVKPIQNLIAAKVVGSVLLTNTLQFDECSLSSAIPFPSIIINPKNGEIVKDFIKRTSYSSSIAKMSFKITSFDVRPAPSVDFYSSRGPSKNCPYVLKPDIAGPGTSILAAWPTNIPVLDFVSYKFFNKFNILSGTSMSCPHIAGVAALLKGAHDDWSPAAIRSAIMTTSDIFDNTNEHIKDIGTGNKATPLALGAGHVNPNRALDPGLIYDAGVQDYVNLLCAVNFTQKHITTITRSSVNDCSKPSLDLNYPSFIAFFNSGNSSKTTQHFHRTVTNVGEGQTTYVASITPIKRFRINVIPNKLVFKKKNQKIRYRLSIEGPRMIQKNKISFG* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2513 738 ProSiteProfiles Serine proteases, subtilase domain profile. 117 610 - -
Tpr5g2513 738 Pfam Peptidase inhibitor I9 28 109 IPR010259 -
Tpr5g2513 738 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Tpr5g2513 738 CDD PA_subtilisin_like 349 463 - -
Tpr5g2513 738 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Tpr5g2513 738 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Tpr5g2513 738 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Tpr5g2513 738 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 731 IPR045051 -
Tpr5g2513 738 CDD Peptidases_S8_3 107 576 IPR034197 -
Tpr5g2513 738 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 110 IPR037045 -
Tpr5g2513 738 Pfam Fibronectin type-III domain 654 738 IPR041469 -
Tpr5g2513 738 PANTHER PUTATIVE-RELATED 17 731 - -
Tpr5g2513 738 Coils Coil 738 738 - -
Tpr5g2513 738 Gene3D - 343 478 - -
Tpr5g2513 738 Gene3D - 627 738 - -
Tpr5g2513 738 SUPERFAMILY Subtilisin-like 109 614 IPR036852 GO:0004252|GO:0006508
Tpr5g2513 738 Pfam Subtilase family 133 581 IPR000209 GO:0006508|GO:0008236
Tpr5g2513 738 Gene3D Peptidase S8/S53 domain 135 623 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2513 Tpr-Chr5 46962477 46964693 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2513 23 735 Subtilisin-like Serine Gene Family AT5G67090 43.544 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2513 - - gmx:100781249 902.894