Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2501 ATGCCGGTATTGCGTAGTGGAGCGCGCCGTGGTCGGCCACCAAAGCAAAACCGACAACCACCGGTGAGAAATCCGATTGATGGGGAGGCAATTGCTACTAGAACGAGACGGAGACGTGCAGCTGCTGCGGCAGCAGCCAATGATAAGGTTGAAGAGGAGCCGATTGCTGTTGTGGCAGGAAAGGAGGAAAATGAGAACATAGTTGTCGCCGCGACAGCAAAGGGAGAGGAGGAGAATCGAGCGTTGGAGGAAGGTGGTGGAGCTGAGAAGGAAGAGGTTGGGGAGAAACAGATGGATGGAATTGAGAGTGGTGGTCATAGCAATGATAAGGCTGATGCTGAAGAAGAAAGCAATGGCTTTGTTATTCCTGAACAGGTTCAAGTAGGTGATTCTCCGCTGTATAAAACAGAGAAAAAACTTGGCAAGGGTGGATTTGGGCAAGTATATGTTGGTCGGCGTGTTTCTGGTGGAAATTTGAGCCAGAGAATTGGACCTGGAGCTGTAGAGGTAGCAATAAAATTTGAGCACATAAGTAGTAAAGGATGTAACTATGGACCGCCAAATGAGTGGCACGTCTACAACACCCTTGGTGGAAGCCATGGTGTGCCACAGGTACATTACAAGGGCAGGCAAGGTGACTATTTCATCATGATCATGGATATTCTAGGACCTAGCTTGTGGGATGTTTGGAATACTAAGTCCCACACCATGTCCACTGAAATGGTTGCTTGTATTGCCATCGAAGCAATATCCATATTGGAGAAGATGCACTCTCGAGGGTATGTACATGGAGATGTGAAACCGGAAAATTTTCTGCTTGGCGCTCGTGGGACAGTGGACGAGAAAAAACTGTTCCTGGTGGATCTTGGATTAGCTACTAAATGGCAGAATAGTACAACTGGTTTACATGTGGACTATGACCAAAGGCCTGATGTCTTCAGGGGCACAGTCCGCTATGCAAGTGTGCATGCACATTTGGGGAGAACTGGAAGCAGGCGGGATGATTTGGAATCTCTTGCATATACGTTGGTTTTTCTTCTTCGAGGTCATCTTCCTTGGCAAGGATACCAGGGAGAAAACAAGGGATATCAGGTTTGCAAGACGAAGATGGGAACAACTCCAGATACCTTATGTTGTTTTTGTCCCCGGCCTTTTAAAGAGTTTGTTGAACATGTAGTGAGCTTAAAGTATGATGAAGAGCCGAGTTACGCAAAATACATTTCTCTCTTTGATGGGATTATTGGTCCAAACCCAGATATTAGACCACTTAATACAGAAGGTGCACAACAGCTTGTTGGTCATAAAAGAGGCCGGCTGGCTTTAGAAGATGATGATGAACAACCCAAAAAGAAGGTTCGAATGGGTGTGCCAGCGAACCAGTGGATTAGTGTTTACAATGCCCGTAGACCGATGAAACAAAGATATCACTACAATGTGTCAAGTACAAGATTATCACAGCACATTGACAAGGGAAACGAGGATGGTTTATATATTAGCAGTGTTGCTTCATCTCAGGGCCTATGGGCCTTAATTATGGATGCTGGGACAGGTTTCACTTCCCAAGTTTATGAACTCTCCACCCAATTTTTCCATAAGGAATGGATCAAGGAGCAGTGGGAAAAAAGTTACTATATCAGTGCAGTTGCAGGAGTTGCAAATGGGAGTTCATTAGTAGTAATGTCTAAAGGCACCCAATATATACAGCAATCGTACAAAGTTAGTGATTCATTTCCTTTTAAATGGATTAACAAAAAGTGGAGGGAGGGCTTTTTTGTAACCTCAATGGCCACAGCAGGGCTCAAATGGGGAGTAGTTATGTCTCGTGGGGCAGGGTTTTCAGAACAGGTAGTCGAACTAGATTTTCTGTATCCTAGTGAAGGGATTCACAAGCGGTGGGAGAGTGGATACCGAATCACATCGACTGCTGCAACTCAGGAGCAAGCTGCTTTTGTTTTGAGTATTCCAAGGAAGAAGCCACAAGACGAAACTCAGGAAACACTAAGGACTACTGCTTTTCCTAGTACACATATTAAGGAGAAATGGGCGAAAAACCTCTACATTGCCTCTATTTGCTATGGACGTACCGTCTCTTGA 2094 0.4518 MPVLRSGARRGRPPKQNRQPPVRNPIDGEAIATRTRRRRAAAAAAANDKVEEEPIAVVAGKEENENIVVAATAKGEEENRALEEGGGAEKEEVGEKQMDGIESGGHSNDKADAEEESNGFVIPEQVQVGDSPLYKTEKKLGKGGFGQVYVGRRVSGGNLSQRIGPGAVEVAIKFEHISSKGCNYGPPNEWHVYNTLGGSHGVPQVHYKGRQGDYFIMIMDILGPSLWDVWNTKSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGARGTVDEKKLFLVDLGLATKWQNSTTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGHLPWQGYQGENKGYQVCKTKMGTTPDTLCCFCPRPFKEFVEHVVSLKYDEEPSYAKYISLFDGIIGPNPDIRPLNTEGAQQLVGHKRGRLALEDDDEQPKKKVRMGVPANQWISVYNARRPMKQRYHYNVSSTRLSQHIDKGNEDGLYISSVASSQGLWALIMDAGTGFTSQVYELSTQFFHKEWIKEQWEKSYYISAVAGVANGSSLVVMSKGTQYIQQSYKVSDSFPFKWINKKWREGFFVTSMATAGLKWGVVMSRGAGFSEQVVELDFLYPSEGIHKRWESGYRITSTAATQEQAAFVLSIPRKKPQDETQETLRTTAFPSTHIKEKWAKNLYIASICYGRTVS* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2501 697 MobiDBLite consensus disorder prediction 1 57 - -
Tpr5g2501 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Tpr5g2501 697 ProSiteProfiles Protein kinase domain profile. 134 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2501 697 MobiDBLite consensus disorder prediction 30 46 - -
Tpr5g2501 697 SMART serkin_6 134 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2501 697 Gene3D Transferase(Phosphotransferase) domain 1 97 451 - -
Tpr5g2501 697 MobiDBLite consensus disorder prediction 72 94 - -
Tpr5g2501 697 SUPERFAMILY Protein kinase-like (PK-like) 134 416 IPR011009 -
Tpr5g2501 697 CDD STKc_CK1 134 410 - -
Tpr5g2501 697 ProSitePatterns Protein kinases ATP-binding region signature. 140 173 IPR017441 GO:0005524
Tpr5g2501 697 PANTHER CASEIN KINASE-RELATED 96 670 - -
Tpr5g2501 697 MobiDBLite consensus disorder prediction 76 94 - -
Tpr5g2501 697 PANTHER CASEIN KINASE 1-LIKE PROTEIN HD16 ISOFORM X1 96 670 - -
Tpr5g2501 697 Pfam Protein kinase domain 134 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2501 Tpr-Chr5 46782083 46788483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2501 134 292 EF-hand Containing Proteins AT4G36070 28.834 6.76e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Tpr5g2501 Pkinase 1.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2501 - - gmx:100799630 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2501 5 46782083 46788483 Tpr5g2501 5 46782083 46788483 ECH