Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2486 ATGGTTAATGTAGGAAAAAACCCCAATTTGAAGTTCCTTCAGTTTCTTCTATTTCTGTTTTACCTCAATTTCAATAGAATCAGTTCTTATCAGATGGCAGCTATGAACTGTACAGACACAAGACGTGTTTGTACTTCTTTCTTGGCCTATAAGCCTCAAAAAAACCAATCTTTGGGAGTGATTCAGAGTATGTTTGATGTGTTACCAAGTGACATCACAGTTGAAGGAAATGGTTGGGATTACTTATTCATAAGAAAGAATTGTTCTTGTGCATCTGGTCTCAAGAAATATGTGTCTAATACAACTTACACTGTGAAATCAAATGAAGGGTTTGTTGATGATTTGGTTATGGATGCATATGATGGGCTTATTTTGCTTCCAAACACTTCAAGGAAAGCAAGGAATGGTGCTGTTATATCATTGAGGTTGTTTTGTGGCTGTTCTAGTGGATTATGGAACTATCTGTTGAGTTATGTGTTGAGAGATGGAGACAGTGTTGAATCTTTGGCTAGTAGATTTGGGGTTAGTATGGATAGTATTGAGGATGTGAATGGCCTTGATGGTCCTGATAATGTTACTGTCGGTTCACTATATTACATTCCTCTTGATTCTGTTCCTGGTGACCCTTATCCTCTGAATAATGCTTCTCCACCAGCTTCTGTTCCTACCCCTTCTGTTGTTAATTTTTCAGGTGATGATGCCAATCATAAGTATCATGTACCCTATGCATTGATCATTGGTGGTTTAGGAGTTGGTCTTATTCTGATAATGTTAGGCATTGTTCTTTGTGTTTGCCTGAGATCGTCAAATTGTTATTCTGATTCCAGAAGTCATGAAAAAGATGGCGAGGGAAAGGTCTCTCATAAATTCCATATTCTTCGGAATCCAAGTTTTTTGTGTGGTTCTGGAAGGTACATATGCGGCAAACATGTTGACCACAAGCAAACAGATGGTGACTCCAGCACTCGCACAATTACCGTCCCAAAAGCTTCAACTCTAGGGCCGGACGTATTTGATATGGATAAACCTGTAGTTTTTGCATATGAAGAGATTTTTTCGTCAACTGAAGGCTTCTCTGATTCAAATCTACTTGGACATGGAACATATGGATCTGTCTACTATACCCTCCTTTGCGACCAGGAAGTTGCTATCAAAAGAATGACGGCTACAAAAACAAAAGAATTCACATCAGAGATTAAAGTTTTATGCAAGGTTCATCATGCTAATCTGGTAGAATTGATTGGCTATGCAGCCAGTCATGATGAGCTTTTCCTAGTTTATGAATATGCTCAAAAGGGTTCCCTCCGAAGCCATTTGCATGATCCTCAAAATAAGGGTCATTCACCACTATCATGGATCATGAGGGTCCAAATTGCACTTGATGCTGCTAGGGGACTTGAATATATACACGAGCACACAAAAGCACATTATGTTCACCGAGATATAAAGACAAGCAACATTTTACTTGATGCTTCCTTTAAAGCAAAGATTTCAGACTTTGGATTGGCGAAACTTGTCGGGATAACAAATGAGGGGGATGTTTCAACTACCAAAGTTGTTGGTACATATGGATATCTTGCTCCGGAATACTTGACTGATGGCCTTGCAACAACCAAAAGCGATGTTTATGCATTTGGTGTTGTTCTTTTTGAGACTATAACCGGAAAGGAGGCCATTATTCGAACAGAAGGCATGATGACAAAAAATCCTGAAAGACGATCACTAGCATCAATAATGTTGGCAGTTCTTAGGAACTCACCTGATTCATTGAGCATGTCAAGCTTGAAAGATTACATTGATCCAAATATGATGAATCTGTATCCTCACGATTGTGTATTTAAGATGGCTTTGCTGGCAAAGCAATGTGTGGACGATGATCCGATCTTACGACCAGATATGAAACAGATAGTGATTTCCATCTCACAGATTCTTTTGTCTTCTATTGAGTGGGAAGCAACACTAGCTGGGAATAGCCAAGTATTCAGTGGACTTGTTCAGGGAAGATAG 2007 0.3916 MVNVGKNPNLKFLQFLLFLFYLNFNRISSYQMAAMNCTDTRRVCTSFLAYKPQKNQSLGVIQSMFDVLPSDITVEGNGWDYLFIRKNCSCASGLKKYVSNTTYTVKSNEGFVDDLVMDAYDGLILLPNTSRKARNGAVISLRLFCGCSSGLWNYLLSYVLRDGDSVESLASRFGVSMDSIEDVNGLDGPDNVTVGSLYYIPLDSVPGDPYPLNNASPPASVPTPSVVNFSGDDANHKYHVPYALIIGGLGVGLILIMLGIVLCVCLRSSNCYSDSRSHEKDGEGKVSHKFHILRNPSFLCGSGRYICGKHVDHKQTDGDSSTRTITVPKASTLGPDVFDMDKPVVFAYEEIFSSTEGFSDSNLLGHGTYGSVYYTLLCDQEVAIKRMTATKTKEFTSEIKVLCKVHHANLVELIGYAASHDELFLVYEYAQKGSLRSHLHDPQNKGHSPLSWIMRVQIALDAARGLEYIHEHTKAHYVHRDIKTSNILLDASFKAKISDFGLAKLVGITNEGDVSTTKVVGTYGYLAPEYLTDGLATTKSDVYAFGVVLFETITGKEAIIRTEGMMTKNPERRSLASIMLAVLRNSPDSLSMSSLKDYIDPNMMNLYPHDCVFKMALLAKQCVDDDPILRPDMKQIVISISQILLSSIEWEATLAGNSQVFSGLVQGR* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2486 668 SUPERFAMILY Protein kinase-like (PK-like) 337 637 IPR011009 -
Tpr5g2486 668 Pfam Protein tyrosine and serine/threonine kinase 362 637 IPR001245 GO:0004672|GO:0006468
Tpr5g2486 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Tpr5g2486 668 Gene3D Transferase(Phosphotransferase) domain 1 431 654 - -
Tpr5g2486 668 CDD LysM 157 200 IPR018392 -
Tpr5g2486 668 SMART serkin_6 358 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2486 668 ProSitePatterns Protein kinases ATP-binding region signature. 364 385 IPR017441 GO:0005524
Tpr5g2486 668 Gene3D Phosphorylase Kinase; domain 1 334 429 - -
Tpr5g2486 668 Gene3D LysM domain 153 206 IPR036779 -
Tpr5g2486 668 PANTHER BNAA06G02020D PROTEIN 35 668 - -
Tpr5g2486 668 Pfam LysM domain 158 195 IPR018392 -
Tpr5g2486 668 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 35 668 IPR044812 GO:0019199|GO:0045087
Tpr5g2486 668 ProSiteProfiles LysM domain profile. 156 200 IPR018392 -
Tpr5g2486 668 SUPERFAMILY LysM domain 157 201 IPR036779 -
Tpr5g2486 668 ProSiteProfiles Protein kinase domain profile. 358 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2486 668 SMART LysM_2 157 201 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2486 Tpr-Chr5 46562502 46568504 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2486 35 668 Receptor kinase-like Gene Family AT1G51940 67.757 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr5g2486 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2486 - - gmx:100796989 1082.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2486 5 46562502 46568504 Tpr5g2486 5 46562502 46568504 ECH