Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2477 ATGCCTAACTTGAGTAACTTCCACCATCCTCCTTCAATACGTGTCACTTTCTCTTGTCATATATATATTCATACTACACTGAAGAAATACTCAAGTCTTCAAAAAGCAGAAAAGATGAACATGAATAGCAAAGAAACACTTGTTGTACTTTTAGTGTCTTTCTTATTCTTTTGTAGCTATGCACAAGATACACTTGTACCAGCTATCATAACATTTGGTGACTCTGCAGTAGATGTAGGGAATAATGACTACCTTCCTACTCTTTTTAAGGCTAATTACCCTCCTTATGGTAGAGATTTTGTTAATAAACAACCTACTGGGAGGTTTTGCAATGGCAAATTAGCTACTGATATTACAGCTGAAACACTTGGTTTTACGACATTTCCACCGGCATATCTTAGTCCACAGGCATCAGGGAAGAACCTCCTTATCGGAGCAAACTTTGCTTCAGCTGCATCTGGTTTTGATGAAAAGGCTGCTACATTGAATCATGCAATTACATTGCCCCAACAGTTAAGTTATTTCAAGGAATATCAAGGCAAGTTGGCTCAGGTTGCTGGCAGTAAAAAAGCTGCATCAATTATCAAGGATTCTTTGTATCTATTGAGTGCTGGCAGCAGTGACTTTCTACAAAATTATTATGTCAATCCTTGGGTCAACAAATTAGTCACTGTTGATCAGTATTCAGCTTACCTACTAGAATCATTCAATAGCTTTGTTAAGGACTTGTATGGATTAGGAGCTAGGAAAATTGGAGTGACTTCACTTCCGCCATTGGGTTGTCTACCTGCTGCAAGGACTTTATTCGGTGCCCATGAAAGTGGTTGTGTCTCAAGAATCAACACTGATATTCAAGGATTTAACAAGAAGGTCAACTCAGCTGCATCAAATCTTCAAAAGCAACTTTCTGGTCTTAAGATTGTTATTTTTGATATTTACAAGCCTCTCTATGACCTTGTTCAAAAACCTTCAGATTTCGGTTTTGCTGAGGCAGGAAGAGGTTGCTGTGGTACAGGAACTGTAGAAACAACATTCTTGTTGTGCAATCAAAAATCACCAGGAACTTGCTCTAATGCAACACAGTATGTTTTTTGGGACAGTGTTCATCCTTCAGAAGCTGCTAATCAAGTTATAGCTGATGCTTTACTTCTACAAGGCATAGCTCTTATCACATAA 1176 0.3827 MPNLSNFHHPPSIRVTFSCHIYIHTTLKKYSSLQKAEKMNMNSKETLVVLLVSFLFFCSYAQDTLVPAIITFGDSAVDVGNNDYLPTLFKANYPPYGRDFVNKQPTGRFCNGKLATDITAETLGFTTFPPAYLSPQASGKNLLIGANFASAASGFDEKAATLNHAITLPQQLSYFKEYQGKLAQVAGSKKAASIIKDSLYLLSAGSSDFLQNYYVNPWVNKLVTVDQYSAYLLESFNSFVKDLYGLGARKIGVTSLPPLGCLPAARTLFGAHESGCVSRINTDIQGFNKKVNSAASNLQKQLSGLKIVIFDIYKPLYDLVQKPSDFGFAEAGRGCCGTGTVETTFLLCNQKSPGTCSNATQYVFWDSVHPSEAANQVIADALLLQGIALIT* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2477 391 Pfam GDSL-like Lipase/Acylhydrolase 69 382 IPR001087 GO:0016788
Tpr5g2477 391 Gene3D SGNH hydrolase 57 386 IPR036514 -
Tpr5g2477 391 CDD SGNH_plant_lipase_like 67 383 IPR035669 -
Tpr5g2477 391 SUPERFAMILY SGNH hydrolase 162 382 - -
Tpr5g2477 391 PANTHER GDSL ESTERASE/LIPASE EXL3 40 390 - -
Tpr5g2477 391 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 40 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2477 Tpr-Chr5 46457776 46460701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2477 41 383 Pollen Coat Proteome AT1G75910 35.549 1.84e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2477 - - gmx:100793645 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4868 7 56610734 56612612 Tpr5g2477 5 46457776 46460701 PCT