Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2475 ATGAAGCAAACAATAACGATGAGAATGTTACTGCATTTTCTTTCAGTATTGCTGGGTGTCCTTACTAGTATTTTGGTTTCCAGTATTGCTCAAGATCAATCAGGATTCATTAGCTTAGATTGTGGTCTACCTGAAGATGTGACCTATTCTGATAGGAGCACAGGCATAAATTACATTTCAGATGCCAAATTCATAAATACTGGTGTAAGTAAGAGGTTAGGAAATTCTGAAAAGCTTAGTCAAGAGTTACTAGAATATGTGAGGAGCTTTCCTAGTGGGGTGAGAAATTGTTACAAAATAAAGGTAACAAGTGGTACTAAATATTTAATCAGAACTTCATTCTACTATGGAAATTATGATAATCTAAATAAGCCACCACAATTTGATCTTCATCTTGGAGCTAATGTGTGGGATACAGTGAAGTTCACCAATTTATCATTTATCCAAACCAGTGAGATCATTTACACTCCATCACAGGATTATATACAACCATGTCTTGTTAACACTGCACCTTCGACTTCTTTCAGTGTGGATGATAACCCTGGTCTTTGTACGACGGAATCATGCAAAAAGAAGCATTTGTCTGTACCACTTATTGCATCATTTTCAGCATTAATTGTAATCCTCTTGATTTCTCTTGGGGTTTGGAGATTCAGAAGACAAAAAGTTACGTCTTCAAATTCTAAGAAAAAGGGTTCAATGAAATCAAAACATCAAGCATTCAGTTATACTGAAATTCTCAATATTACTGATAACTTCAAAACTATAATTGGAGAAGGAGGATTTGGAAAAGTTTACTTTGGCACTCTACAAGATCAAACTCAAGTCGCTGTTAAGAGGCTTTCACCATCATCAATGCAAGGTTATAAGGAGTTTCAATCAGAGGCACAACTTTTAACGATTGTTCATCATAGAAATTTGGTCTCCCACCTTGGATATTGTGATGAAGGTGAAATCAAAGCATTGGTTTATGAATATATGGCCAATGGAAATCTCCAACAACTCTTATTCGTGGAAAATTCAAATATCTTAACATGGAATGAGAGACTAAACATTGCAGTTGATGCAGCACACGGACTGGATTATCTACATAATGGATGTAAACCACCTATTGTGCATAGAGATTTGAAACCATCCAACATATTACTAGATGATAAGATGCATGCCAAGATAGCAGATTTCGGTCTAAGTAGAGCTTTTGGTAACGATGTTGATTCTCATATATCTACACGCCCTGCTGGTACATTTGGTTACATTGATCCAGATGGCCAAATTCAGAGAACGGGAAACACGAATAAGAATAATGATATCTATAGCTTTGGGATAATTCTATTTGAATTGATCACTGGCCAGAAAGCACTAGGAAGAGCATCAGGAGAAACCATTCACATACTTCAATGGGTTACTCCCATAGTTAAAAGTGGAGATATTCAAAACATTGTTGATGCGAGGTTGCAGGGTGAATTCAACATCAATTCAGCATGGAAAGTTGTAGAGATAGCCATGTCATGCACTTCAGCAATTGCAGTTGAAAGACCAGACACGAGCCAAATATTGGCAGAGCTAAAGGACTGTGTATCTTTGGAGATAGTTCAGAGAAATAGTGGAAGCGCGGCCATATATGAATTGACTTCTTTATCTATTGGATCAAATACTAGTCCTTTAGCTAGGTAA 1674 0.3662 MKQTITMRMLLHFLSVLLGVLTSILVSSIAQDQSGFISLDCGLPEDVTYSDRSTGINYISDAKFINTGVSKRLGNSEKLSQELLEYVRSFPSGVRNCYKIKVTSGTKYLIRTSFYYGNYDNLNKPPQFDLHLGANVWDTVKFTNLSFIQTSEIIYTPSQDYIQPCLVNTAPSTSFSVDDNPGLCTTESCKKKHLSVPLIASFSALIVILLISLGVWRFRRQKVTSSNSKKKGSMKSKHQAFSYTEILNITDNFKTIIGEGGFGKVYFGTLQDQTQVAVKRLSPSSMQGYKEFQSEAQLLTIVHHRNLVSHLGYCDEGEIKALVYEYMANGNLQQLLFVENSNILTWNERLNIAVDAAHGLDYLHNGCKPPIVHRDLKPSNILLDDKMHAKIADFGLSRAFGNDVDSHISTRPAGTFGYIDPDGQIQRTGNTNKNNDIYSFGIILFELITGQKALGRASGETIHILQWVTPIVKSGDIQNIVDARLQGEFNINSAWKVVEIAMSCTSAIAVERPDTSQILAELKDCVSLEIVQRNSGSAAIYELTSLSIGSNTSPLAR* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2475 557 ProSiteProfiles Protein kinase domain profile. 251 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2475 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
Tpr5g2475 557 ProSitePatterns Protein kinases ATP-binding region signature. 257 279 IPR017441 GO:0005524
Tpr5g2475 557 CDD STKc_IRAK 257 523 - -
Tpr5g2475 557 SUPERFAMILY Protein kinase-like (PK-like) 233 522 IPR011009 -
Tpr5g2475 557 Gene3D Phosphorylase Kinase; domain 1 232 326 - -
Tpr5g2475 557 Gene3D Transferase(Phosphotransferase) domain 1 327 540 - -
Tpr5g2475 557 SMART serkin_6 251 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2475 557 PANTHER OS07G0107800 PROTEIN-RELATED 24 174 - -
Tpr5g2475 557 PANTHER OS07G0107800 PROTEIN-RELATED 172 550 - -
Tpr5g2475 557 Pfam Malectin-like domain 39 175 IPR024788 -
Tpr5g2475 557 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 24 174 - -
Tpr5g2475 557 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 172 550 - -
Tpr5g2475 557 Pfam Protein tyrosine and serine/threonine kinase 253 522 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2475 Tpr-Chr5 46448881 46452690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2475 172 554 Receptor kinase-like Gene Family AT2G19230 44.987 3.48e-112 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tpr5g2475 PK_Tyr_Ser-Thr 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2475 - - mtr:MTR_8g014970 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2475 5 46448881 46452690 Tpr5g2475 5 46448881 46452690 ECH