Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2474 ATGATGCAAACAATAATGATTAGAATGTCATTGCATTTTCTTTCAGCATTGCTTGGTGTCCTTACTATTCTGGTTTTGATACAAGCTCAGGATCAATCAGGATTCATTAGCTTGGATTGTGGTCTACCTGAAGATGTGAGCTATTCTGCATTGAAGACAGGCATAAATTACATTTCAGATTCCAAATTTATAGATACTGGTGTAAGTAAAAGGTTAGGCAATTCTGAAAAGCTTAGTGAAAAGCTACTAGAATATGTGAGGAGCTTTCCTAGTGGGGTGAGAAATTGTTACAGAATAAATGTAACAAGTGGTACTAAATATTTAATCAGAGCTACTTTCTATTATGGAAACTATGATAATCTAAATCAGCCACCACAATTTGATCTTCATCTTGGAGCTAATGTGTGGGATACAGTGAAGTTCACAAATTTATCAGTCATTAAAACCAGTGAGATGATTTACACTCCATCACTAGATTACATACAACTATGTCTTGTTAACACTGGCAAAGGGACACCATTCATTTCAGCTATAGAATTGAGAACTTTAAACAATGATACTTATGTCACGCGCTCAGCTGAATCAGTATTATTAGAATTCTTACGATTGGGTTTAAGTCCCAATTCCATCACAAACTTAGAATACAGGTACAAAGATGATGTTTACGATCGCCTCTGGTTTACTTTTCAACCACATGCTATGAAACAATTAAGCGCGTCACTTAACAATGATGGTCTATTACTTGAAAATAATTATAAACCACCAGCAATTGTGATGAGCACTGCTGCTACACCAGTAAATGTCAGTGCCCCTTTAGAATTAGAATGGGAAGCAGATAATGTAAATGACCAATACTACCTCTACCTGCACTTTAATGAGGTAGAAGAGTTAGCAGCAAATGAAACTAGAGCTTTCAATATCACAATAAATGGAGAGTTTTTGTATGGACCTATGACACCTAGATACCGGTCAGCAGATACCATATTAACTACAACACCTTTAACCGGAGCAGCAAGGTATCAAGTTTCCCTTTCTAAGACAAAGAATTCAACACTTCCACCCATCCTCAATGCTATTGAGGTTTATAAAGTAAAAGACTTCTCACAATCAGAAACTCAACAGGATGATGTTGATGCTATAAAAAATATCAAGAATGCTTATGGGGTGGCTAGAAATTGGCAAGGAGATCCATGTGGTCCTTTGAAGTATATGTGGGAAGGCCTAAACTGTAGTATTGATGGCTATGATCCCCCTAGAATCACATCTTTGAATTTGTCTTCAAGTGGATTGATAGGGCAAATAGAATCTTCCATATCAAAGCTCACTATGTTACAGTACTTGGATTTATCAAACAATAGCTTAAATGGTCCCTTACCTGATTTTCTGATACAACTGCATTCACTAAAAGTCTTAAATGTAGGGAAGAACAAACTTACCGGGTTAGTTCCAAGTGGACTGCTTGAGAGATCAAAAACTAAATCACTGTCACTTAGCATGGATGATAACTCTGGTCTTTGTACGACGAAATCCTGCAGAAAGAAGAGTTCGCATGTACCACTGATTGCTTCGATTTCAGCAATAATTGTTGCAATCCTCTTGATTTCTCTTGGATTTTGGATATTCAGAAGACATAAAGGTATTTTAATTATGATATCAATTTTTACTTTTTTTCTTCCTTGTCCATGTTCTTATTCACATTCTTGCATATCTTTTATCACTACTGCAGTTACGTCTACAAATTCTATGAAAAGAGGTTCACTGATACCAAAACAGCATGCATTCAGTTACACTGAAATTCTCAATATTACTGATAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAGAAGTTTACTTTGGCACGCTACAAAATCAAACTCAAGTCGCTGTTAAGAGGCTTTCACCATCATCAGTGCAAGGTTACAAGGAATTTCAATCAGAGGCACAACTTCTAATGATTGTTCATCATAGAAATTTGGTCCCTCTCATTGGATATTGTGATGAAGATGAAATCAAAGCATTGCTTTATGAATACATGGCCAATGGAAATCTCCACCAACACTTGTTAGTGGAAAATACAAATATCTTAAAATGGAATGAGAGACTTAACATTGCAGTTGATGCCGCAAACGGATTGGATTATCTGCACAATGGATGTAAACCACCTATTATTCATAGAGACTTGAAACCTTCAAACATATTACTAGATGAAAACATGCATGCCAAGATTGCTGATTTTGGTATAAGTAGAACTTTTGTTAATGATATTGATTCTCATATATCCACCTGCCCTGCCGGTACATTTGGTTACGTTGATCCTGAAGTTCAGAGAACAGGAAACACAAATAAAAAGAATGATGTGTACAGCTTTGGAATAGTTCTATTTGTGTTGATCACCGGTCGTCAAGCAATAGTAAGAGCAGGTGGAGAAAACATTAACATACTTGAATGGGTTATTCCCATAATTGAAAGAGGAGATATTCAAAATGTTGTTGATCCAAAGTTGGAGGGTGAATTTAGCATCAATTCAGCATGGAAAGTTGTAGAGATTGCTATGTCATGCATTTCGCCAAATGCAGTTGAAAGACCAGACATGAGCCTAATATTAGCAGAGTTAAAAGAATGTCTATCTTTGGATATGGTTCAGAGAAACTATGGAAACACAAGAGCTATAGATGAATTGGTTTCTTTTGCTACTGTATCTGAAACCGCTTTATTAGCCAGATAA 2730 0.3608 MMQTIMIRMSLHFLSALLGVLTILVLIQAQDQSGFISLDCGLPEDVSYSALKTGINYISDSKFIDTGVSKRLGNSEKLSEKLLEYVRSFPSGVRNCYRINVTSGTKYLIRATFYYGNYDNLNQPPQFDLHLGANVWDTVKFTNLSVIKTSEMIYTPSLDYIQLCLVNTGKGTPFISAIELRTLNNDTYVTRSAESVLLEFLRLGLSPNSITNLEYRYKDDVYDRLWFTFQPHAMKQLSASLNNDGLLLENNYKPPAIVMSTAATPVNVSAPLELEWEADNVNDQYYLYLHFNEVEELAANETRAFNITINGEFLYGPMTPRYRSADTILTTTPLTGAARYQVSLSKTKNSTLPPILNAIEVYKVKDFSQSETQQDDVDAIKNIKNAYGVARNWQGDPCGPLKYMWEGLNCSIDGYDPPRITSLNLSSSGLIGQIESSISKLTMLQYLDLSNNSLNGPLPDFLIQLHSLKVLNVGKNKLTGLVPSGLLERSKTKSLSLSMDDNSGLCTTKSCRKKSSHVPLIASISAIIVAILLISLGFWIFRRHKGILIMISIFTFFLPCPCSYSHSCISFITTAVTSTNSMKRGSLIPKQHAFSYTEILNITDNFKTIIGEGGFGEVYFGTLQNQTQVAVKRLSPSSVQGYKEFQSEAQLLMIVHHRNLVPLIGYCDEDEIKALLYEYMANGNLHQHLLVENTNILKWNERLNIAVDAANGLDYLHNGCKPPIIHRDLKPSNILLDENMHAKIADFGISRTFVNDIDSHISTCPAGTFGYVDPEVQRTGNTNKKNDVYSFGIVLFVLITGRQAIVRAGGENINILEWVIPIIERGDIQNVVDPKLEGEFSINSAWKVVEIAMSCISPNAVERPDMSLILAELKECLSLDMVQRNYGNTRAIDELVSFATVSETALLAR* 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2474 909 CDD STKc_IRAK 610 875 - -
Tpr5g2474 909 Gene3D Phosphorylase Kinase; domain 1 576 679 - -
Tpr5g2474 909 Gene3D Ribonuclease Inhibitor 377 499 IPR032675 -
Tpr5g2474 909 PANTHER OS07G0107800 PROTEIN-RELATED 23 904 - -
Tpr5g2474 909 ProSitePatterns Serine/Threonine protein kinases active-site signature. 724 736 IPR008271 GO:0004672|GO:0006468
Tpr5g2474 909 SUPERFAMILY L domain-like 390 503 - -
Tpr5g2474 909 SUPERFAMILY Protein kinase-like (PK-like) 584 873 IPR011009 -
Tpr5g2474 909 ProSitePatterns Protein kinases ATP-binding region signature. 610 632 IPR017441 GO:0005524
Tpr5g2474 909 SMART serkin_6 604 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2474 909 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 23 904 - -
Tpr5g2474 909 Gene3D Transferase(Phosphotransferase) domain 1 680 893 - -
Tpr5g2474 909 ProSiteProfiles Protein kinase domain profile. 604 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2474 909 Pfam Malectin-like domain 38 364 IPR024788 -
Tpr5g2474 909 Pfam Protein tyrosine and serine/threonine kinase 606 872 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2474 Tpr-Chr5 46442499 46447871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2474 11 886 Receptor kinase-like Gene Family AT1G05700 45.689 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tpr5g2474 Malectin_like 1.2e-107 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2474 - - mtr:MTR_8g014700 1261.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2474 5 46442499 46447871 Tpr5g2474 5 46442499 46447871 ECH