Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2471 ATGAAGCAAAGAAAAGTGGCAATGTTACTGCAATTTTTTTCAGTATGGCTTGGTGTCCTTACTATATTGGTTTTGATACAAGCTCAAGAACCAGGATTCATTAGCTTAGATTGTGGTCTACCTGAAAATTCAGACTATTCTTCATTGGAGACAAAGATAAATTACATTTCAGATGCCAAATTCATAGATACTGGTGAAAGTAAGAGGGTAAATGGCAATATTCCTGTTAAACAGCAACTACAATATGTGAGGAGTTTTCCAATTGGAGTGAAAAATTGTTACAGAATAGATGTAACAAATGGTACTAAATATTTAATCAGAGCTTCTTTCTATTATGGTAACTATGATAATCTAAATGATCCACCACAATTTGATCTTACTTTTGGAGCTAATGTTTGGGATACAGTGAAATTCACCAATTTATCAGGAATCACAACCAGTGAGATCATATATACTCCTTTACTAGATTACATACAACCATGTCTTGTCAACACCGGCACAGGGACTCCGTTCATTTCAGCTATAGAATTGAGGCCTTTGAACAAAGAAGCTTATGTTTCTTACTCAGCAAAATCAATATTATCACTCTTCTTTCGATTTGATATAGGTTCCATCACAAACTTAGAATACAGGTACAAAGATGATGTTTATGACCGCGTCTGGTTACCTTTTGAGTGGAATGGCATGAAACAATTAAGCACCGATGAAGGTCTATTAACAAAGAGTATATATAACGCACCAGCAATTGTTATGAGAACTGCTGCTACACCAGTAAATGTCAGTGCCCCTGTACAAATATTTTTTGATGCAGAAAATGTAAATGAGCAATACTACGCATATTTGCACTTTAACGAGGTTGAGAAGCTTGCAGAAAATGAAACTAGAATATTCAACATCACAGTGAATGGAGTGTCTTTGTATGAATTTGAGGTACCTGTATACCGGTCACCAGATACCATATTTAGTCAAACACCTATGACTGGAGCCTCAAGATATATATTTTCCCTTACTAAGACAGAGAATTCAACTCTTCCACCCATCCTCAATGCCTTTGAGATTTATATAGTTAAAGACTTCTCACAATCAGAAACTCAACAAGTTGATATTGATACTATCACAAACATCAAGAATGCATATGGGGTGGCTAGAAATTGGCAAGGAGATCCATGTGGTCCAGTGAAATATATGTGGGAAGGCTTAAACTGCAGTATTGATGATGGCAATAACCCTCCAAGAATCACATCATTGAATTTGTCTTCAAATGGATTGACAGGGGAGATAGCATCTTCCATATCAAACCTCACTATGTTACAATACTTAGATTTATCAAATAATAGCTTAGAAGGTCCTTTACCAGATTTTCTGACCCAACTGCATTCACTAAAAGTCTTAAACTTGAGGAAGAACAACCTCACAGGGGTAGTTTCAAGTGAACTCCTAAAGAGATCAAGAGCAGGTTCACTATCACTAAGTGTCGAAGATAACCCTGGTCTTTGTACGACTGAAACATGCAACAAAAAGAAGAAGAAGAAGAAGAATTTGTCTGCACCACTTATTGCATCATTTTCTGCATTAATAGTAATCCTCTTGATTTCTTTTGGCTTTTGGAGATTCAGAAGACAAATAGCTAATTCATGGAGGACAATAGCTATGCCCACGTCTTCAAATTCTAAGAAAAAGGGTACCATGAAATCAAACCATCAAGCATTCAATTACACTGAACTTCTCAATATTACTGATAACTTCAAAACTATTATCGGAGAAGGAGGATTTGGAAAAGTTTACTTAGGTACACTACAAGATCAAACTCGAGTCGCTGTTAAGATGCTTTCACCATCATCAGTGCAAGGTTATAAGGAATTTCAATCAGAGGCACAACTTCTAACGGTTGTTCATCATAGAAATTTGGTCTCCCTCATTGGATATTGTGATGAAGATGAAACCAAAGCATTGATTTATGAGTATATGGCCAATGGAAATCTCCAGCAACTCTTATTAGTGGAAAATTCAAATATCTTAAAATGGAATGAGAGAATTAACATTGCAGTTGATGCATCACACGGATTGGATTATCTGCATAATGGATGTAAACCACCTATTATGCATAGAGATTTGAAGCCTTCCAACATATTACTAGATGAAAACATGCATGCCAAGATTGCCGATTTTGGTCTAAGTAGAACTTTTAACGATAATGACACTCATATATCAACGCGCCTTGCTGGTACATTTGGTTACATTGATCCTGAATGTCAGAGAACAGGAAGCACAAATAAAACAAATGATATCTATAGCTTTGGAATAATTCTATTTGTGTTGATCACCGGTCGTCAAGCAATAGTAAGAACGGCGGAACAAAGCATTCACATACTTGAATGGGTTACCTCTCTAATCAGAGCAGGAGATATTGAAAATCTTGTTGATCCAAAGTTGAAGGGTGAATTCAACATCAGTTCTGCATGGAAAATTGTTGAGATAGCAATGTTATGCACTTCAAGAAATGTTGATGAAAGGCCAGACATTAGGAAAATATTGGCAGAGCTAAATGAATGTCTATCTTTGGAGATGGTTCAGAGAAATAATGGAAGAGAAAAAGCTACAGATGAATCGACATTTTTAAATGATCTATCACAAACTGTTCCTTTTCCTAGGTAA 2655 0.3601 MKQRKVAMLLQFFSVWLGVLTILVLIQAQEPGFISLDCGLPENSDYSSLETKINYISDAKFIDTGESKRVNGNIPVKQQLQYVRSFPIGVKNCYRIDVTNGTKYLIRASFYYGNYDNLNDPPQFDLTFGANVWDTVKFTNLSGITTSEIIYTPLLDYIQPCLVNTGTGTPFISAIELRPLNKEAYVSYSAKSILSLFFRFDIGSITNLEYRYKDDVYDRVWLPFEWNGMKQLSTDEGLLTKSIYNAPAIVMRTAATPVNVSAPVQIFFDAENVNEQYYAYLHFNEVEKLAENETRIFNITVNGVSLYEFEVPVYRSPDTIFSQTPMTGASRYIFSLTKTENSTLPPILNAFEIYIVKDFSQSETQQVDIDTITNIKNAYGVARNWQGDPCGPVKYMWEGLNCSIDDGNNPPRITSLNLSSNGLTGEIASSISNLTMLQYLDLSNNSLEGPLPDFLTQLHSLKVLNLRKNNLTGVVSSELLKRSRAGSLSLSVEDNPGLCTTETCNKKKKKKKNLSAPLIASFSALIVILLISFGFWRFRRQIANSWRTIAMPTSSNSKKKGTMKSNHQAFNYTELLNITDNFKTIIGEGGFGKVYLGTLQDQTRVAVKMLSPSSVQGYKEFQSEAQLLTVVHHRNLVSLIGYCDEDETKALIYEYMANGNLQQLLLVENSNILKWNERINIAVDASHGLDYLHNGCKPPIMHRDLKPSNILLDENMHAKIADFGLSRTFNDNDTHISTRLAGTFGYIDPECQRTGSTNKTNDIYSFGIILFVLITGRQAIVRTAEQSIHILEWVTSLIRAGDIENLVDPKLKGEFNISSAWKIVEIAMLCTSRNVDERPDIRKILAELNECLSLEMVQRNNGREKATDESTFLNDLSQTVPFPR* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2471 884 SMART serkin_6 580 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2471 884 Pfam Protein tyrosine and serine/threonine kinase 582 848 IPR001245 GO:0004672|GO:0006468
Tpr5g2471 884 PANTHER OS07G0107800 PROTEIN-RELATED 23 867 - -
Tpr5g2471 884 CDD STKc_IRAK 586 850 - -
Tpr5g2471 884 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 23 867 - -
Tpr5g2471 884 ProSiteProfiles Leucine-rich repeat profile. 460 481 IPR001611 GO:0005515
Tpr5g2471 884 SUPERFAMILY Protein kinase-like (PK-like) 559 848 IPR011009 -
Tpr5g2471 884 Pfam Leucine rich repeat 411 471 IPR001611 GO:0005515
Tpr5g2471 884 SUPERFAMILY L domain-like 373 491 - -
Tpr5g2471 884 Pfam Malectin-like domain 36 355 IPR024788 -
Tpr5g2471 884 Gene3D Phosphorylase Kinase; domain 1 552 655 - -
Tpr5g2471 884 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Tpr5g2471 884 ProSitePatterns Protein kinases ATP-binding region signature. 586 608 IPR017441 GO:0005524
Tpr5g2471 884 Gene3D Transferase(Phosphotransferase) domain 1 656 874 - -
Tpr5g2471 884 ProSiteProfiles Protein kinase domain profile. 580 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2471 884 Gene3D Ribonuclease Inhibitor 369 493 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2471 Tpr-Chr5 46399063 46405523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2471 8 860 Receptor kinase-like Gene Family AT1G05700 44.746 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tpr5g2471 Malectin_like 1.5e-101 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2471 - - mtr:MTR_8g014700 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2471 5 46399063 46405523 Tpr5g2471 5 46399063 46405523 ECH