Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2470 ATGAAGCAAACAATGGTGCCAATGTTACTGCATTTTCTTTCGGTATTGCTTGGTGTCCTTACTATTTTGGTTTTGATACAAGCTCAAGATCAATCAGGATTTATTAGCTTAGATTGTGGTCTACCAGAAAATTCAACCTATTCTGAGAAGCTTACAGGCATAAATTACATATCTGATTCCAAATTCATAGATACTGGTGTAAGTAAGAGGGTACAAGGCAATATAACCGGTAAACAGCAACTAGATTATGTGAGAAGCTTTCCTAACGGAGTGAAAAATTGTTACAGAATAAATGTAACAAATGGTACTAAATATTTAATCAGAGCTTCTTTCTATTATGGTAACTATGATGATTTAAATGATCCACCACAATTTGATCTTACTTTTGGAGCTAATGTTTGGGATACGGTGAAGTTCACCAATATATCACTCACCACAGTAAGGGAGATCATTTACACTCCATCAAAAGATTACATACAAACATGTCTTGTTAACACTGGCAAAGGGACTCCATTCATTTCAGCTATAGAATTGAGGCCTTTGAACAAGCAAGCTTATGTTTCATACTCAGATAAATCAGTATTATCGGTCTTCTTTCGATTTGATGTAGGCTCCGTCACAAACTTAGAATACAGGTACAAAGATGATGTTTATGACCGCATTTGGCGACCTTTTCCGTGGAACGAGATGAAACAATTAAGCACCGACGATGATCTATTATTTCAGAACATTTATAACCCACCAACAATTGTTATGAGCACCGCAGTTACACCAGTAAACGACAGTGCCCCTGTAAAATTTAGTTTTGATGCAGAAAATGTAAATGAGCAATTCTACACATATTTGCACTTTAATGAGGTTGAGAAGCTAGCAGAAAATGAAACTAGAGCATTCAACATCACAGTGAATGGAGAGCTTTTGGCTGAACTTGAAGTACCTATATACCAGTCAGCAGATACCAGATATACTCCAACACCTTTGACTGGAGCCACAAAATATATATTTACCCTGTCTAAGACTGAGAGTTCAACCCTTCCACCTATCCTCAATGGCGTCGAGGTTTATAAAGTAACAAATTTCTCACAATCTGAAACTCAACAGGATGATGTTGATACAATCACAAACATCAAGAATGCTTATGGGGTGGCTAGAAATTGGCAAGGAGATCCATGTGGTCCTGTCAAGTTTATATGGGAAGGCCTAAACTGTAGTATTGATGATGGCAATAACCCTCCAAGAATCACATCTTTGAATTTGTCTTCAAGTGGATTGACAGGGGAGATAGCATCTTCCATATCAAACCTCACTATGTTACAATACTTGGATTTATCAAATAATAGATTAGAAGGTCCTTTACCAGTTTTTCTGACGCAACTGCAATCACTAAAAGTCTTCAGAAACGTGGGGAAGAACAAACTTACAGGGTTGGTTTCAAATGAACTCCTTGAGAGATCAAAAACAGGTTTACTATCACTAAGTGTGGAAGATAACCCTGGTCTTTGTACACCAGAATCATGCAAAAAGAAGAAGAAGAATTTATCTGGACCACTTATTGCATCATTTTCAGCATTAATTGTAATCCTCTTGATTTCACTTGTAGTTTGGAGATTCAGAAGACAAATTGGTACATCTTCAAATTTTAAGAAACAGGGTTCCATGAAATCAAAACATCAAGCATTCAGTTACACTGAAATTCTCAATATTACTGATAACTTCAAAACTATTATTGGTGAAGGAGGATTTGGAAAAGTTTACTTTGGCACTCTACAAGATCAAACTCGAGTCGCTGTTAAGAGGCTTTCACCAACATCAGTGCAAGGTTATAAAGAATTTCAATCAGAGGCACAACTTCTAACGATTGTTCATCATAGAAATTTGGTATCCCTCATTGGATATTGTGATGGAGGTAACATCAAAGCATTGGTTTATGAATACATGGCCAATGGAAATCTCCAACAACTCTTATTAGTGAAAAATTCAAAAATCTTAAAATGGAATGAGAGACTTAACATTGCAGTTGATGCATCACACGGACTGGATTATCTGCATAATGGATGTAAACCACCTATTATGCATAGAGATTTGAAGCCTTCCAACATATTACTGGATGAAAACATGCATGCCAAGATTGCCGATTTTGGTCTAAGTAGAGCTTTTGGTAGTGATATTGACTCTCATATATCAACGCGTCTTGCTGGTACATTTGGTTACATTGATCCTGAATGTCAAAGAACAGGAAGCACAAATAAAACAAACGATATCTTTAGCTTTGGAATAATTCTATTTGTGTTGATTACCGGTCGTCAAGCAATAGTAAGAAAGGGCGAACAAAGCATTCACATACTTGAATGGGTTACTACTCTAATCAGAACAGGTGATATTCAAAATTTTATTGATCCAAAGTTGAAGGGTGAATTCAACATCAATTCTGCATGGAAAATTGTTGAGATAGCAATGTTATGCACTTCAAGAAATGTTGCTGAAAGGCCAGACATTAGAAAAATATTGGCAGAGCTAAATGAATGTCTATCTTTGGAGATAGGTCAGAGAAATAATGGAAGAGAAAGAGTTATAGTTGAATCTATTTCTTTAAATGATCTAACACAAACAGCTCCCTTTGCTAGGTAA 2628 0.3619 MKQTMVPMLLHFLSVLLGVLTILVLIQAQDQSGFISLDCGLPENSTYSEKLTGINYISDSKFIDTGVSKRVQGNITGKQQLDYVRSFPNGVKNCYRINVTNGTKYLIRASFYYGNYDDLNDPPQFDLTFGANVWDTVKFTNISLTTVREIIYTPSKDYIQTCLVNTGKGTPFISAIELRPLNKQAYVSYSDKSVLSVFFRFDVGSVTNLEYRYKDDVYDRIWRPFPWNEMKQLSTDDDLLFQNIYNPPTIVMSTAVTPVNDSAPVKFSFDAENVNEQFYTYLHFNEVEKLAENETRAFNITVNGELLAELEVPIYQSADTRYTPTPLTGATKYIFTLSKTESSTLPPILNGVEVYKVTNFSQSETQQDDVDTITNIKNAYGVARNWQGDPCGPVKFIWEGLNCSIDDGNNPPRITSLNLSSSGLTGEIASSISNLTMLQYLDLSNNRLEGPLPVFLTQLQSLKVFRNVGKNKLTGLVSNELLERSKTGLLSLSVEDNPGLCTPESCKKKKKNLSGPLIASFSALIVILLISLVVWRFRRQIGTSSNFKKQGSMKSKHQAFSYTEILNITDNFKTIIGEGGFGKVYFGTLQDQTRVAVKRLSPTSVQGYKEFQSEAQLLTIVHHRNLVSLIGYCDGGNIKALVYEYMANGNLQQLLLVKNSKILKWNERLNIAVDASHGLDYLHNGCKPPIMHRDLKPSNILLDENMHAKIADFGLSRAFGSDIDSHISTRLAGTFGYIDPECQRTGSTNKTNDIFSFGIILFVLITGRQAIVRKGEQSIHILEWVTTLIRTGDIQNFIDPKLKGEFNINSAWKIVEIAMLCTSRNVAERPDIRKILAELNECLSLEIGQRNNGRERVIVESISLNDLTQTAPFAR* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2470 875 Gene3D Transferase(Phosphotransferase) domain 1 646 861 - -
Tpr5g2470 875 SUPERFAMILY Protein kinase-like (PK-like) 551 839 IPR011009 -
Tpr5g2470 875 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 22 865 - -
Tpr5g2470 875 ProSitePatterns Protein kinases ATP-binding region signature. 576 598 IPR017441 GO:0005524
Tpr5g2470 875 PANTHER OS07G0107800 PROTEIN-RELATED 22 865 - -
Tpr5g2470 875 Pfam Protein tyrosine and serine/threonine kinase 572 839 IPR001245 GO:0004672|GO:0006468
Tpr5g2470 875 Gene3D Ribonuclease Inhibitor 370 501 IPR032675 -
Tpr5g2470 875 Pfam Malectin-like domain 37 357 IPR024788 -
Tpr5g2470 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 690 702 IPR008271 GO:0004672|GO:0006468
Tpr5g2470 875 SMART serkin_6 570 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2470 875 SUPERFAMILY L domain-like 374 524 - -
Tpr5g2470 875 CDD STKc_IRAK 576 841 - -
Tpr5g2470 875 Gene3D Phosphorylase Kinase; domain 1 543 645 - -
Tpr5g2470 875 ProSiteProfiles Protein kinase domain profile. 570 843 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2470 Tpr-Chr5 46388319 46394999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2470 19 851 Receptor kinase-like Gene Family AT1G05700 46.224 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tpr5g2470 Malectin_like 1.4e-104 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2470 - - mtr:MTR_8g014700 1209.13