Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2469 ATGGAAAGAGAATCACCACGACGGATAATGTTAAAGGCGTGCATATGGCTTGCCTTTGTGCCATTTATTTGCATCAGTCAAGCCAATTCAGAACAACTAGACAAACCTGTTTCAAGAGAAATTGCTATCAATGAAAATCCAGGTTTTATAAGCATTGATTGTGGATCAACAGTTGGTTACTTGCATAATGAGACTGGAACTTGGTATAACGCAGACAAAGGATTTGTTGAAACAGGAGAGAATCACGTGACTTCATCCACTATTAACTTAAACTATCTCTACTTTGGGAAACAGTTGACAACATTGAGATGTTTTCCAGAAGGAGATAGAAACTGTTACACCTTGAAACCAAGAGAGGGAAAAAATAATAGGTATCTCATAAGGGCTTTCTTTTCATATGGAAACTATGATGGAAAAAATCAAACACAGTCATTTGATTTGTATCTTGGAGTCAACCTTTGGGACAATATTAATTTCACTTATAATTACCATTTTACTGAGATCATTCACACTCCTTCAAGTGACACTATAAATGTGTGCCTTGTAAAGACTGGTCCAACAATCCCTTGCATTTCTTCATTGGAATTGAGACTTTTGAACAATTCAATTTATCAGAGTCATCAAATAATCTCCACCAGTGATCCACAGCCTCTGTTGAAAATGGAAGCTAGATTCGATGTTGGTCCCTCGTCCTGTTCAACCAAACACTCTAGGTACAAAGATGACGAGTATGATCGAATATGGACTTGCGACAAAAATTTGTACGGAACAAACGATTGGTATCCGTCGGGTTTGGATGAATCAATAAATATTGATCCTGAAACCAATAATGATGCTTATAAAATACCAGCTCAAGTATGGAGAAGTACAGTCCAACCAGAGAATGTTTCACGCCCCTTGGGATTTGTCTATACTTATACGTATACACCACCCCTAGACAAAGCTTATGATTATTATGTCTACTTTCACTTTTCTGAAATAGAAAAACTTTCAGATGGAAAAAAAAGAATCATCAATATCACCCTCAACTACCAACCTGTGTCTCAGCCTTTAGTTCTGGATTACTTAAAACCTGTTACACTCAATTACAAAAGTCAAAGTAATGTTTGGTTTAACATCAGCGCAGCCCCACATTCTGATGCTCCTCCTATACTAAATGCGTTTGAGATCTATAAGTTCATAACTCAGGTTGATTCACCAACAGATGCTCGAGATGTTGGTGCAATCATGGATATCAAAAGTTCATACCAAATCTATAAATTGAGTTGGCAAGGAGACCCGTGTCTTCCTAAGCAATATGCATGGGAAGGTCTTGTTTGCAAAGGCGACAGCGACACCATTCCAAGGATCACATCTTTGAACCTGAGTTCAAGCCAACTAGCAGGGGAGATAAATATTTCGTTCTCATATCTTACAGAACTGGAGTATCTGGATTTGTCACACAACGAGTTGGAAGGACCTTTGCCGGAATTTCTAGGAAATCTGCCAAAGTTAAAAGTTCTTAATCTAACCGGAAACAAGCTTTCGGGTCCAATTCCGGATGCTCTCAAGCAAAGGGCAGATGCAACTTTGCAATTAAGACATACTATTTGTATAACGGGTTCATGCAAAAAGAAGAAAATTGTTGTACCACTTGTTGCATCACTTTCAGCATTAATTGTAACCATTTTGGCCTCTCTTGGATTTTGGCTATTCAAAAGACAAAAAGCGGTGCTTTCAAATCCTAAGAAGTATGGTTCATTGAAATCAAAACATCAAGTATTTAGCTACACAGAAATTCTTAATATCACTGATAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAGGTTTATGTTGGCATTCTACAAGATCACACGAAAGTTGCTGTTAAGTTGCTTTCACCATCGTCAAGGCAAGGTTATAAGGAATTTCAATCAGAGGTACAACTTCTAACAGTTGTTCACCATAGAAATTTGGTCTCTCTCGTTGGATATTGTGATCAAGGTGAAATCAAAGCATTAATTTATGAGTACATGGCCAATGGAAATCTCCAACAACTTCTATCAGAAGAAAATCAAGATATCTTAAGTTGGAATGCGAGACTTAAAATTGCAGTCGACGCTGCACATGGATTGGAATATCTGCATAATGGATGTAAACCACCTATTATGCATAGAGATTTGAAGCCTTCCAACATACTACTAGATGAGAACTTGCAAGCAAAGATTGCTGATTTTGGTCTAAGTAGAGCTTTTGGTAACGATAATGATTCTCATATATCCACATGTCCTGCTGGTACATTTGGTTACCTTGATCCAGAATGTCAAAGAACAGGAAACACAAATAAGAAGAATGATATCTACAGCTTCGGGATAATTCTATTTGTGTTGATCACCGGAAAGAAAGCCGTAGTAAAAGTACCTGGTCAAAACATTCACATACTTCAATGGGTTATTCCCATAGTTAAAAGTGGAGATATTCGAAACATTGTTGATACGAGGCTGCAGGGTGAATTCAGCATCAATTCAGCATGGAAAGTTGTCGAGATAGCCATGTCCTGCATTTCACAAAATGCGGATGAAAGGCCGGACATTAGCCAAATATTGGTAGAGCTAAGTGAATGTCTATCTTTGGATAGAGTTTGGAGCAATGGTGAAAGAGCAAGAGATATAAATGAAATGAGTTCTTTAACTGCTGAAGTAGACACTGCTCCATTAGCTAGGTAA 2712 0.3772 MERESPRRIMLKACIWLAFVPFICISQANSEQLDKPVSREIAINENPGFISIDCGSTVGYLHNETGTWYNADKGFVETGENHVTSSTINLNYLYFGKQLTTLRCFPEGDRNCYTLKPREGKNNRYLIRAFFSYGNYDGKNQTQSFDLYLGVNLWDNINFTYNYHFTEIIHTPSSDTINVCLVKTGPTIPCISSLELRLLNNSIYQSHQIISTSDPQPLLKMEARFDVGPSSCSTKHSRYKDDEYDRIWTCDKNLYGTNDWYPSGLDESINIDPETNNDAYKIPAQVWRSTVQPENVSRPLGFVYTYTYTPPLDKAYDYYVYFHFSEIEKLSDGKKRIINITLNYQPVSQPLVLDYLKPVTLNYKSQSNVWFNISAAPHSDAPPILNAFEIYKFITQVDSPTDARDVGAIMDIKSSYQIYKLSWQGDPCLPKQYAWEGLVCKGDSDTIPRITSLNLSSSQLAGEINISFSYLTELEYLDLSHNELEGPLPEFLGNLPKLKVLNLTGNKLSGPIPDALKQRADATLQLRHTICITGSCKKKKIVVPLVASLSALIVTILASLGFWLFKRQKAVLSNPKKYGSLKSKHQVFSYTEILNITDNFKTIIGEGGFGKVYVGILQDHTKVAVKLLSPSSRQGYKEFQSEVQLLTVVHHRNLVSLVGYCDQGEIKALIYEYMANGNLQQLLSEENQDILSWNARLKIAVDAAHGLEYLHNGCKPPIMHRDLKPSNILLDENLQAKIADFGLSRAFGNDNDSHISTCPAGTFGYLDPECQRTGNTNKKNDIYSFGIILFVLITGKKAVVKVPGQNIHILQWVIPIVKSGDIRNIVDTRLQGEFSINSAWKVVEIAMSCISQNADERPDISQILVELSECLSLDRVWSNGERARDINEMSSLTAEVDTAPLAR* 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2469 903 SUPERFAMILY L domain-like 442 517 - -
Tpr5g2469 903 SUPERFAMILY Protein kinase-like (PK-like) 580 867 IPR011009 -
Tpr5g2469 903 PRINTS Leucine-rich repeat signature 474 487 - -
Tpr5g2469 903 PRINTS Leucine-rich repeat signature 495 508 - -
Tpr5g2469 903 Gene3D Transferase(Phosphotransferase) domain 1 674 887 - -
Tpr5g2469 903 ProSitePatterns Serine/Threonine protein kinases active-site signature. 718 730 IPR008271 GO:0004672|GO:0006468
Tpr5g2469 903 Pfam Leucine rich repeat 448 508 IPR001611 GO:0005515
Tpr5g2469 903 CDD STKc_IRAK 604 869 - -
Tpr5g2469 903 Pfam Protein tyrosine and serine/threonine kinase 600 866 IPR001245 GO:0004672|GO:0006468
Tpr5g2469 903 SMART serkin_6 598 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2469 903 ProSiteProfiles Protein kinase domain profile. 598 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2469 903 Pfam Malectin-like domain 52 392 IPR024788 -
Tpr5g2469 903 Gene3D Phosphorylase Kinase; domain 1 579 673 - -
Tpr5g2469 903 Gene3D Ribonuclease Inhibitor 407 527 IPR032675 -
Tpr5g2469 903 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 39 895 - -
Tpr5g2469 903 PANTHER OS07G0107800 PROTEIN-RELATED 39 895 - -
Tpr5g2469 903 ProSitePatterns Protein kinases ATP-binding region signature. 604 626 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2469 Tpr-Chr5 46351003 46363646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2469 41 903 Receptor kinase-like Gene Family AT2G19210 41.554 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tpr5g2469 Malectin_like 3.3e-81 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2469 - - mtr:MTR_8g015040 1295.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2469 5 46351003 46363646 Tpr5g2469 5 46351003 46363646 ECH