Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2468 ATGATGGGAATGTTTATGCATTTTCTTTTGGTATTGCTTACTATTTTGGTTTTGATACAAGCTCAGCAGGATGATCAATCAGGATTTATTAGCTTAGATTGTGGTCAACGTGAAGATGTGAGATATTCTGCGAGCAGGACAGGCATAAATTATAGATCAGATGCCAATTTCATAGATACTGGTGAAAGTAAGAGGGTACAAGTAAAAATACCCAAAAGTGCTGTTAAACAGGAACTACAATATGTGAGAAGCTTTCCTAGTGGAGTGAGAAATTGTTACAGAATAAATGTAACAAGTGGTACTAAATATTTTATCAGAGCTACTTTCGCTTATGGTAACTATGATAATCGCAATCAGGCACCACAATTTGATCTTTATCTTGGAGTTAACCTGTGGAGAACAATGTATAAGCAGTTGTTAAAAAAATCATTCGCCACATCCACTGGAATGATTTACACTCCATCACTGGATTACATACAACTATGTCTTGTTAACACAGGAAATGGAATTCCATTCATTTCAGTTATAGAATTGAGGCCTTTGAACAGTTCTATTTATCCCCAGTACTCACCTAATTCCGCATTACTAACAAAGTACCGATACGATTTAGGTTCCATAATCACCACAGACTCAGTTGTATACAGGTACAAAGATGATGTTTATGACCGCTTCTGGTCGCCTTATGAATTATCCAGTGATTTTTTGAGAATAAGCACCAATGTTAAAAACGTAGATCAATCACTTCTGCATCCTTATAAACCACCAGCTATTGTGATGAGCAGTGCTGTTACACCAGTAAATGCCAGTGCTCCTTTAGAATTAGAATGGGAAGTAGATAATGTAAATGACCAATACTACTTCTACTTATACTTCTATGAAGTTGAAGAGTTGGCAGCCAATGAAACTAGAAAATTCAATATCACACATAATGACAAGTTATGGTTTGGACCTCTGACGCCTCTGACGCAACCAGGAACCGTACAGCCTGACAGGCATTTGACAGGAAAGAAAACGTATCGATTTTCCCTTTTTAAGACACATGATTCAACCCTTCCACCCATCCTTAATGCTGTTGAGGTTTATCAAGTAAAAGACTTCTCACAATCAGAAACTAAACAAGATGATATTGATAGTATCACAAACATCAAGAAGGCTTATAGGGTGGATAAAAATTGGCAAGGAGATCCATGTGCCCCAGTGAATTACATGTGGGAAGGCCTAAACTGTATTCCTGATGGCAATAACATACCAAGAATCACATCCTTGAATTTGTCCTCAAGTGATTTAACAGGGAAAATAGATTCTTCCTTCTCAAAGCTCACTATGTTAGAATACTTGGATTTATCAAACAATAGCTTAACCGGTCCCTTACCTGATTTTCTGATACAACTGCGTTCACTAAAAGTCTTCAGAAAGGTGGGGAAGAACAAACTTACAGGATTAGTTCCAGATGAACTCCTTGAGAGATCAAAAAAAGGTTCATTATCATTGAGCACGGACGATAATCCTGGTCTTTGTATGACGGAATCATGTGGAAAGAAAAGTTCACAATCACATGTACCACTGATTGCTTCGATTTCAGCAATAATTGTTGTAATCCTCTTGATTTCTCTTGGATTTTGGATATTCAGAAGACAAAAAGTTATGTCTACAAATTCTAAGAAAAGGGGCTCGTTGGAATCGAAACATCAAGCATTCAGTTATACTGAAATTCTAAATATTACTGATAACTTCAAAACTATTATTGGACAAGGAGGATTTGGAAAAGTTTATCTTGGTGTTCTACAAAATCACGCACAAGTTGCGGTTAAGATACTTTCACTATCCTCAATGCAAGGTTATAAGGAATTTCAATCAGAGGCACAACTTCTAATGATTGTTCATCATAGAAATTTAGTCTCTCTCATTGGATATTGTGATGAAGTTGAAATCAAAGCATTGGTTTATGAATACATGGCCAATGGAAATCTCCACCAACAATTATCAGTGAAAAATACAAATATTTTAAAATGGAATGAGAGACTTAACATTGCAGTGGATGCAGCACAAGGATTAGATTATCTTCATAATGGATGTAAACCACCTATTATGCACAGAGATTTAAAACCTTCCAACATATTGCTCGATGAAAACATGCATGCCAAGATTGCTGATTTTGGTCTAAGTAGAGCTTTTGGTAATGACATTGATTCTCATATATCCACAAACCCTGCCGGTACACGTGGTTACGTTGATCCTGAATTTCAGAGAACAGGAAAGGCAAATAAAAAAAATGATGTGTACAGCTTTGGAATAGTTCTATTTGTATTGATCACTGGTCGTCCAGCAATAGTAAGAGAAGGTGGAGAAACCATTCACATACTTGAATGGGCTATTCCTATAATCGAAGAAGGAGATATTCAAAATGTTATCGATCCAAGGTTGGAGGGTGAATTTAGCATCAATTCAGCATGGAAATTTGTGGAGATTGCCATGTCATGCACATTAGCAAATGCAGTTGTTGAAAGGCCAGACATGAGCTTTATATTAGCAGAGTTAAAGGAATGTCAATCTTTGGACATGGTTCGAAGAAACTTTGAAAACACAGGAGCTATAGATGAATTGGTTTCGTTGGCTACTGTATCAGATACCACCATTTCAGCTAGATAA 2649 0.3662 MMGMFMHFLLVLLTILVLIQAQQDDQSGFISLDCGQREDVRYSASRTGINYRSDANFIDTGESKRVQVKIPKSAVKQELQYVRSFPSGVRNCYRINVTSGTKYFIRATFAYGNYDNRNQAPQFDLYLGVNLWRTMYKQLLKKSFATSTGMIYTPSLDYIQLCLVNTGNGIPFISVIELRPLNSSIYPQYSPNSALLTKYRYDLGSIITTDSVVYRYKDDVYDRFWSPYELSSDFLRISTNVKNVDQSLLHPYKPPAIVMSSAVTPVNASAPLELEWEVDNVNDQYYFYLYFYEVEELAANETRKFNITHNDKLWFGPLTPLTQPGTVQPDRHLTGKKTYRFSLFKTHDSTLPPILNAVEVYQVKDFSQSETKQDDIDSITNIKKAYRVDKNWQGDPCAPVNYMWEGLNCIPDGNNIPRITSLNLSSSDLTGKIDSSFSKLTMLEYLDLSNNSLTGPLPDFLIQLRSLKVFRKVGKNKLTGLVPDELLERSKKGSLSLSTDDNPGLCMTESCGKKSSQSHVPLIASISAIIVVILLISLGFWIFRRQKVMSTNSKKRGSLESKHQAFSYTEILNITDNFKTIIGQGGFGKVYLGVLQNHAQVAVKILSLSSMQGYKEFQSEAQLLMIVHHRNLVSLIGYCDEVEIKALVYEYMANGNLHQQLSVKNTNILKWNERLNIAVDAAQGLDYLHNGCKPPIMHRDLKPSNILLDENMHAKIADFGLSRAFGNDIDSHISTNPAGTRGYVDPEFQRTGKANKKNDVYSFGIVLFVLITGRPAIVREGGETIHILEWAIPIIEEGDIQNVIDPRLEGEFSINSAWKFVEIAMSCTLANAVVERPDMSFILAELKECQSLDMVRRNFENTGAIDELVSLATVSDTTISAR* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2468 882 SUPERFAMILY Protein kinase-like (PK-like) 559 846 IPR011009 -
Tpr5g2468 882 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
Tpr5g2468 882 ProSiteProfiles Protein kinase domain profile. 576 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2468 882 Gene3D Phosphorylase Kinase; domain 1 557 651 - -
Tpr5g2468 882 CDD STKc_IRAK 582 848 - -
Tpr5g2468 882 PANTHER OS07G0107800 PROTEIN-RELATED 18 879 - -
Tpr5g2468 882 SUPERFAMILY L domain-like 413 492 - -
Tpr5g2468 882 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 18 879 - -
Tpr5g2468 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 696 708 IPR008271 GO:0004672|GO:0006468
Tpr5g2468 882 SMART serkin_6 576 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2468 882 Gene3D Transferase(Phosphotransferase) domain 1 652 866 - -
Tpr5g2468 882 Pfam Leucine rich repeat 417 468 IPR001611 GO:0005515
Tpr5g2468 882 Pfam Protein kinase domain 579 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2468 882 Pfam Malectin-like domain 32 363 IPR024788 -
Tpr5g2468 882 Gene3D Ribonuclease Inhibitor 377 500 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2468 Tpr-Chr5 46277600 46283076 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2468 2 848 Receptor kinase-like Gene Family AT2G19230 45.592 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tpr5g2468 Malectin_like 2e-101 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2468 - - mtr:MTR_8g014700 1097.8