Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2466 ATGGACAGTCCGACTTTAAATGCACAACTTCTATTGATTGTTCATCATAGAAATTTGGTCTCTCTCATTGGATTTTGTGACGAAGGTGAAATCAAAGCATTGGTTTATGAATACATGGCCAATGGAAATCTCCAACAACAGTTACTAGTGGAAAATACGAATATCTTAAAATGGAGAGAAAGACTTAACATTGCAATTGATACAGCACGCGGTAATTGTGAATTTTCAGGATTGGATTATCTGCATAATGGATGTAAACCACCTATTATGCATAGAGATTTGAAGCCTTCCAACATATTACTAGATGAAAACATGGATGCTAAGATTTCTGATTTTGGTCTAAGTAGAGCTTTTGGTAGTGATATTGATTCTCATATATCTACGCGTCCTGCTGGTACACTTGGTTACGCAGATCCTGAATTTCAGAGAACAGGAAACACAAATAAAAAAAATGATGTGTACAGCTTTGGGATAGTTCTATTTGTGTTGATCACTGGTCGTCAAGCAATAGTAAGAGCAGGTAGAGAAAATATTCACATACTTGAATGGGTTATTCCTATAATCAGAGGAGAAGATATTCAAAATGTCCTTGACTCAAAGTTGGGCGGTGAATTCAGCATCGATTCAGCACGAAAAGTTGTTGAGATAGCCATGTCATGCATTTTACCAAATTTCGCTAAAAGGCCGGACATTAGCCAAATATTGACAGAACTGAAGGAGAGTCTATCTTTGGATATGGTTCAGAGACACGGAGGAGAACACGATGTAACTGAATCGACTTCATCGCTATTTCAATCAGTAACCGCTCCCTTTCCTAGGTAA 822 0.3759 MDSPTLNAQLLLIVHHRNLVSLIGFCDEGEIKALVYEYMANGNLQQQLLVENTNILKWRERLNIAIDTARGNCEFSGLDYLHNGCKPPIMHRDLKPSNILLDENMDAKISDFGLSRAFGSDIDSHISTRPAGTLGYADPEFQRTGNTNKKNDVYSFGIVLFVLITGRQAIVRAGRENIHILEWVIPIIRGEDIQNVLDSKLGGEFSIDSARKVVEIAMSCILPNFAKRPDISQILTELKESLSLDMVQRHGGEHDVTESTSSLFQSVTAPFPR* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2466 273 MobiDBLite consensus disorder prediction 257 273 - -
Tpr5g2466 273 Gene3D Phosphorylase Kinase; domain 1 5 39 - -
Tpr5g2466 273 Pfam Protein kinase domain 10 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2466 273 PANTHER OS07G0107800 PROTEIN-RELATED 7 263 - -
Tpr5g2466 273 PIRSF ILK 6 253 - -
Tpr5g2466 273 ProSiteProfiles Protein kinase domain profile. 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2466 273 SMART serkin_6 8 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2466 273 MobiDBLite consensus disorder prediction 253 273 - -
Tpr5g2466 273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 89 101 IPR008271 GO:0004672|GO:0006468
Tpr5g2466 273 PANTHER LRR RECEPTOR-LIKE KINASE PLANT-LIKE PROTEIN 7 263 - -
Tpr5g2466 273 Gene3D Transferase(Phosphotransferase) domain 1 40 260 - -
Tpr5g2466 273 SUPERFAMILY Protein kinase-like (PK-like) 9 238 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2466 Tpr-Chr5 46262827 46264409 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2466 6 258 Receptor kinase-like Gene Family AT4G29180 48.819 7.52e-80 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tpr5g2466 Pkinase 4.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2466 - - mtr:MTR_8g014700 389.808