Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2464 ATGGCAGCACCGGGAGGCGGAATGTTAGACGGAGTACAGACGGCGCAACCACCAGGAACAGACATGACCGGAATTTGCTTCCGTGATCAATTATGGCTCAACACTTACCCTCTCGATCGTAATCTCGTCTTCGATTACTTCGCTTTATCACCTTTCTACGATTGGACTTCAAACAACGAACAACTCCGAATGCGATCTCAGCATCCACTCGATCTCTCTCAACTCACGAAAATGACGGGTATAGAGTATGTGTTGAGTGAAGTAATGGAGCCTCATCTTTTCATTATGAGGAAACAGAAGAGAGATGGCCCTGATAAAATTACTGCAATGCTTGCTTATTACATTTTGGATGGTTCAATTTATCAAGCTCCACAATTATCCAATGTTTTTGCTGCTAGAATTGGAAGGGCACTCTATTATATTGAAAAAGCATTTACTACAGCTGCGTCAAAGTTGGAGAAGATAGGATATGTTGATTCTGAAAACGAGACTACAATACCGGAACCAAAGGCGGCTAAGGAGACAATTGACTTAAAAGAAATTAAGCGAGTGGATCATATTCTTGCATCCTTGCAACGCAAGCTTCCACCAGCTCCTCCTCCACCACCATTTCCAGAAGGGTATGTTCCGCCTTCAACAGCAGAAACTGATAAAGGCTCTGAAACTCAGGAAGCAACTGAGACACAAGAACCTACTGTTGATCCCATAATTGATCAGGGACCTTCAAAAAGAATGAAGTTTTGA 744 0.4288 MAAPGGGMLDGVQTAQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNEQLRMRSQHPLDLSQLTKMTGIEYVLSEVMEPHLFIMRKQKRDGPDKITAMLAYYILDGSIYQAPQLSNVFAARIGRALYYIEKAFTTAASKLEKIGYVDSENETTIPEPKAAKETIDLKEIKRVDHILASLQRKLPPAPPPPPFPEGYVPPSTAETDKGSETQEATETQEPTVDPIIDQGPSKRMKF* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2464 247 PANTHER MED-6-RELATED 16 247 IPR007018 GO:0003712|GO:0006357|GO:0016592
Tpr5g2464 247 MobiDBLite consensus disorder prediction 194 209 - -
Tpr5g2464 247 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 6 16 247 - -
Tpr5g2464 247 MobiDBLite consensus disorder prediction 191 247 - -
Tpr5g2464 247 PIRSF MED6_meta/plant 12 247 IPR016820 GO:0003712|GO:0006357|GO:0016592
Tpr5g2464 247 Pfam MED6 mediator sub complex component 25 150 IPR007018 GO:0003712|GO:0006357|GO:0016592
Tpr5g2464 247 Gene3D Mediator complex, subunit Med6 19 148 IPR038566 -
Tpr5g2464 247 MobiDBLite consensus disorder prediction 215 235 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Tpr5g2464 Med6 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2464 K15128 - gmx:100792248 401.364