Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g2424 | ATGCCTTCATGTAACAATGTTTTGAACTCAATTGGTGAAATTTCATGGATTTGTCTGAAGAATTTTGATTTCAATTCTTTATGTTCTCAAAGGAGCTTAATAGACACAATCAATATACTCTTTCTATGTGTCTACTTTATATCTTTGATTATCACTATAATCAGAAAAACTTCTACAAATGAAAGCCACAGAAAATTCTGGATTTTCCTTATTGTTTCAATTTGTTGTGGAATTATTAGCATTGCATTTTTCGGTATTGGATTGTGGAATCTCATAGCAAAAACTGATTACTCTGAGAAATTGAATTGGTTAACTTGCATTATCAAAGGATTCATTTGGAGTTCTTTTGCAGTTTCTTTGATTGTTCAAAGAGTCAAATGGATTAGAATATTAAACTCTATATGGTGGTTATCTTCATGTGTATTGGTTTCAGTTATCAACATTGAAATTCTGATAAAAAATCATGCAATTGAAGCTTTAGATATTGTACAGTGGCTTGTACATTTTCTTCTTTTGTATTGTGCTTTCAAAAATGTTGGTTATTTAGGAAATAATAGTGTTCAAGAAGGTTTATCTGAGCCACTATTAGGTCAAAAAATTGAAACTAATCAAACAGGATTAGGTCATGCTAATTTCTTCAGCAAGTTGATTTTCTGTTGGATTAATTCTTTAATCAGTTTAGGTTACTCGAAGCCACTCGGTCTTGAAGATATACCTTCTCTTGTTTCTGAAGATGAATCAAACATGGCTTATCAAAAATTTGTTGATGCTTGGGAATCACTTGTTAGAGAGAGGACTAAGAACAATACAAAGAGTTTGGTTCTTTGGTCTATAGTTAGAATTTACTTGAAAGAAAATTTATTAATTGCATTTTACGCATTAATCAGAACTATTGCTGTTGTAGTTTCATCTCTAATATTGTATGCATTTGTTAGCTACTCGAATAGAACTGAGGAAGATCTTAAAAAAGGTCTTTCTATAGTTGGTTTTTTGATTGTCACCAAGGTGTTCGAGTCTTTGTCGCAAAGACATTGGTTTTTTAACTCAAGGAGATCAGGAATGAAAATGAGATCAGCTCTGATGGTGGCAGTTTATCGAAAGCAGTTAAAGCTTTCTAGCTCGGCAAGGACAAGGCACTCGGCTGGCGAAATTGTGAATTACATTGCAGTTGATGCATATAGAATGGGAGAATTTCCATGGTGGTTTCATAGAACATGGACTTCTGCATTGCAACTTGTTCTTTCTATTGGTGTACTTTTTTGTGTTGTTGGTAATGGTTCTCTTCCTGGTTTAGTCCCTCTTCTTATATGTGGACTTCTCAATGTACCATTTGCAAAGATCATGCAAAAGTGTCAGTCACAGTTTATGATTGCACAGGACGAGCGTCTCCGATCAACTTCAGAGATTCTGAACAGTATGAAGATCATTAAGTTACAATCATGGGAAGAAAAATTCAAGAACTTAGTTGAGTCGCTACGCAATAAAGAGTTTGTTTGGTTGTCTAAGGCACAAATACTGAAAGCTACTAATTCATTTCTTTATTGGATGTCTCCTACGGTTGTTTCTGCTGTTGTTTTCCTTGGATGTGCTGTTACCGGGAGTGCACCATTGAATGCTGAAACCATTTTCACAGTTATTGCAACATTGAAGAACATGGGAGAACCTGTTAGAATGATCCCTGAGGCACTATCTATTATGATTCAAGTTAAGGTTTCGTTTGATCGTCTTAATATATTTTTTCTTGATGAAGAACTAAATAATATTGATAGTGAAAGAAACTTACGGCAATGTTTGGTTAATGCTGTGGAAATTCAAGATGGCAACTTCATTTGGGATCACGAATCTGTCTCCTCAACTTTAAAAGACGTGAATTTAGAAATCAAACGGGGACTGAAAATTGCAGTTTGTGGACCAGTTGGAGCTGGAAAATCGTCACTTTTGTATGCGATACTTGGAGAGATTCCTAAGATTTCAGGAACTGTTAACGTTGATGGCACATTAGCCTATGTGTCTCAATCGTCTTGGATACAAAGTGGATCAGTTCAAGATAATATACTCTTTGGCAAGCCAATGGACAAAACAAGATATGAGAAAGTAATTAAAGCTTGTGCCTTAGATAAGGATATCAATGATTTTAGCCATGGTGATGTTACAGAAATTGGTCAGAGAGGGATCAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTAGAGCAGTCTACAATGATGCTGATATCTATCTCCTTGATGATCCTTTCAGTGCAGTTGATGCACATACAACTTCAATACTATTCAATGATTGTGTCATGACTGCTTTAAGAGAGAAAACAGTGATTCTAGTTACTCATCAAGTGGAGTTTCTCTCAGAAGTTGATACTATATTGATAATGGAGGGTGGAAAAGTTATTCAATCAGGTAGTTATGGGAATCTCCTGACAGCTGGAACAGCCTTTGAACTGCTTGTGAGTGCTCATAAAGACACAATTACTGACTTGAATCAAAATCATGAAAATAAAGGTTCTGAAAATGAGGTTTTGACAAAAAACCAAAGTGAGGGAGAGATTTCTAATATCAAGGGACCAATTGGCACACAGCTTACACAAGAGGAAGAAAAAGTGATTGGTAATGTTGGATGGAAGCCGTTCTGGGATTATATTAATTATTCCAATGGGACATTCATGCTGTGTTTGATTATTTTAGCACAATCTGGTTTTTTGGCTTTGCAGATTGCATCAACTTTTTGGCTTGCTATAGCCATTGAAATTCCAAAAATAACTAACACCACCTTGATTGGTGTTTATGCATTAGTTTCGTTTTCTAGTTCTGGTTTGGTTTATGTAAGATCTTACTTGTCCGCACTTTTGGGATTAAAAGCTTCTACTGCTTTCTTCTCAAGCTTCACCACAGCTATCTTCAAAGCCCCAATGCTTTTCTTTGATTCAACTCCTGTAGGAAGAATTTTAACTAGAGCTTCATCAGATTTGAGTATTTTGGACTTTGATATACCTTGTTCCATCACCTTTGTAGCATCTATAGCAATTGAAATTTTGGTGATAATTTGTGTAATGGTTTCTGTCACATGGCAAGTTCTCATTGTTGCTGTTCCTGCAATGGTTGCATCAATATTCATTCAGCAATATTATCAAGCCACTGCAACTCAACTAATACGGATCAATGGAATCACCAAAGCTCCAGTCATGAATTTTGCAGCTGAGACATCACTTGGTGTGGTTACCATAAGAGCATTCAAAATGGTAGATAGATTTTTCGAAAACTACTTAAAACTCGTGGACACAGATGCCTCACTGTTTTTTCACTCTAATGTGACAATGGAATGGGTAGTTTTAAGGATTGAAGCACTTCAAAATTTGACTGTCATCACTTTAGCTTTGTTGCTTATTCTACTACCTCAAGGATATGTATCCCCAGGCCTTGTTGGACTGTCTCTTTCCTATGCTTTTACCTTGACAGGAAACCAAATAAATTGGACTAGATGGTTTTCCAATCTATCTAACTATATTATCTCGGTTGAAAGAATCAAGCAATTCATTCACATACCAGCTGAGCCTCCAGCTATTGTGGATAACAACCGACCTCCATCTTCATGGCCTTCCACGGGCAAGATTGACCTCCAAGGTTTGGAGATTAGATATCGTCCTAATGCTCCATTAGTCCTTAAGGGAATCACTTGTACCTTTAAAGAAGGGAGTAGGGTAGGAGTTGTTGGAAGGACAGGAAGTGGAAAAAGTACACTGATTAGCGCGTTGTTTCGCTTAGTTGAGCCTTCAAGAGGTTATATTCTCATTGATGGGATGAACATATGCTCAATGGGGTTGAAGGATTTGAGAACAAGGCTAAGCATAATCCCTCAAGAACCAACTCTTTTCAAGGGAAGCATTAGGACAAACATGGATCCTCTAGGCCTGTACTCAGATGATGAAATATGGAAGGCTGTGGAGAAATGTCAGCTTAAGGAAACAATCAGCAAGCTACCAAGTCTCCTGGACTCTTCAGTGAGTGATGAAGGTGGAAATTGGAGCTTAGGACAACGCCAATTGTTTTGTCTTGGAAGAGTTCTACTTAAGAGAAACAGAATTCTAGTTTTGGATGAAGCTACTGCATCCATCGACTCTGCCACAGATGCCACTCTACAAAGAGTGATTAGACAAGAATTTGCAGAATGCACAGTTATAACTGTGGCTCATAGAGTTCCAACTGTAATAGACAGCGACATGGTCATGGTTTTATCTTATGGGAAATTGGTGGAATATGATGAGCCTTCAAAGCTAATGGACACAAACTCTTCATTTTCTAAGCTGGTAGCTGAATATTGGTCGAGTTGCAGGAAGAATTCCTTCACAAATATTAGCAGCCAGCAGCAATGA | 4389 | 0.3696 | MPSCNNVLNSIGEISWICLKNFDFNSLCSQRSLIDTINILFLCVYFISLIITIIRKTSTNESHRKFWIFLIVSICCGIISIAFFGIGLWNLIAKTDYSEKLNWLTCIIKGFIWSSFAVSLIVQRVKWIRILNSIWWLSSCVLVSVINIEILIKNHAIEALDIVQWLVHFLLLYCAFKNVGYLGNNSVQEGLSEPLLGQKIETNQTGLGHANFFSKLIFCWINSLISLGYSKPLGLEDIPSLVSEDESNMAYQKFVDAWESLVRERTKNNTKSLVLWSIVRIYLKENLLIAFYALIRTIAVVVSSLILYAFVSYSNRTEEDLKKGLSIVGFLIVTKVFESLSQRHWFFNSRRSGMKMRSALMVAVYRKQLKLSSSARTRHSAGEIVNYIAVDAYRMGEFPWWFHRTWTSALQLVLSIGVLFCVVGNGSLPGLVPLLICGLLNVPFAKIMQKCQSQFMIAQDERLRSTSEILNSMKIIKLQSWEEKFKNLVESLRNKEFVWLSKAQILKATNSFLYWMSPTVVSAVVFLGCAVTGSAPLNAETIFTVIATLKNMGEPVRMIPEALSIMIQVKVSFDRLNIFFLDEELNNIDSERNLRQCLVNAVEIQDGNFIWDHESVSSTLKDVNLEIKRGLKIAVCGPVGAGKSSLLYAILGEIPKISGTVNVDGTLAYVSQSSWIQSGSVQDNILFGKPMDKTRYEKVIKACALDKDINDFSHGDVTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTTSILFNDCVMTALREKTVILVTHQVEFLSEVDTILIMEGGKVIQSGSYGNLLTAGTAFELLVSAHKDTITDLNQNHENKGSENEVLTKNQSEGEISNIKGPIGTQLTQEEEKVIGNVGWKPFWDYINYSNGTFMLCLIILAQSGFLALQIASTFWLAIAIEIPKITNTTLIGVYALVSFSSSGLVYVRSYLSALLGLKASTAFFSSFTTAIFKAPMLFFDSTPVGRILTRASSDLSILDFDIPCSITFVASIAIEILVIICVMVSVTWQVLIVAVPAMVASIFIQQYYQATATQLIRINGITKAPVMNFAAETSLGVVTIRAFKMVDRFFENYLKLVDTDASLFFHSNVTMEWVVLRIEALQNLTVITLALLLILLPQGYVSPGLVGLSLSYAFTLTGNQINWTRWFSNLSNYIISVERIKQFIHIPAEPPAIVDNNRPPSSWPSTGKIDLQGLEIRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPSRGYILIDGMNICSMGLKDLRTRLSIIPQEPTLFKGSIRTNMDPLGLYSDDEIWKAVEKCQLKETISKLPSLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDATLQRVIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKLVEYDEPSKLMDTNSSFSKLVAEYWSSCRKNSFTNISSQQQ* | 1463 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g2424 | 1462 | SUPERFAMILY | ABC transporter transmembrane region | 275 | 582 | IPR036640 | GO:0005524|GO:0016021 | |
Tpr5g2424 | 1462 | Pfam | ABC transporter | 1227 | 1375 | IPR003439 | GO:0005524 | |
Tpr5g2424 | 1462 | Pfam | ABC transporter | 620 | 754 | IPR003439 | GO:0005524 | |
Tpr5g2424 | 1462 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1212 | 1444 | IPR003439 | GO:0005524 | |
Tpr5g2424 | 1462 | Gene3D | - | 1193 | 1444 | IPR027417 | - | |
Tpr5g2424 | 1462 | CDD | ABCC_MRP_domain1 | 602 | 802 | - | - | |
Tpr5g2424 | 1462 | SUPERFAMILY | ABC transporter transmembrane region | 881 | 1192 | IPR036640 | GO:0005524|GO:0016021 | |
Tpr5g2424 | 1462 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 602 | 825 | IPR003439 | GO:0005524 | |
Tpr5g2424 | 1462 | CDD | ABC_6TM_ABCC_D2 | 892 | 1185 | IPR044726 | GO:0140359 | |
Tpr5g2424 | 1462 | Gene3D | ABC transporter type 1, transmembrane domain | 862 | 1191 | IPR036640 | GO:0005524|GO:0016021 | |
Tpr5g2424 | 1462 | Gene3D | - | 610 | 856 | IPR027417 | - | |
Tpr5g2424 | 1462 | Gene3D | ABC transporter type 1, transmembrane domain | 256 | 591 | IPR036640 | GO:0005524|GO:0016021 | |
Tpr5g2424 | 1462 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 898 | 1159 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Tpr5g2424 | 1462 | PANTHER | NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED | 61 | 1453 | - | - | |
Tpr5g2424 | 1462 | SMART | AAA_5 | 629 | 802 | IPR003593 | - | |
Tpr5g2424 | 1462 | SMART | AAA_5 | 1236 | 1428 | IPR003593 | - | |
Tpr5g2424 | 1462 | ProSitePatterns | ABC transporters family signature. | 727 | 741 | IPR017871 | GO:0005524 | |
Tpr5g2424 | 1462 | CDD | ABCC_MRP_domain2 | 1208 | 1428 | - | - | |
Tpr5g2424 | 1462 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1200 | 1443 | IPR027417 | - | |
Tpr5g2424 | 1462 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 61 | 1453 | - | - | |
Tpr5g2424 | 1462 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 598 | 822 | IPR027417 | - | |
Tpr5g2424 | 1462 | Pfam | ABC transporter transmembrane region | 291 | 547 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Tpr5g2424 | 1462 | Pfam | ABC transporter transmembrane region | 898 | 1159 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Tpr5g2424 | 1462 | CDD | ABC_6TM_ABCC_D1 | 288 | 576 | IPR044746 | GO:0140359 | |
Tpr5g2424 | 1462 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 287 | 568 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g2424 | Tpr-Chr5 | 45884412 | 45891680 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr5g2424 | 602 | 855 | Calmodulin-binding Proteins | AT2G36910 | 25.090 | 6.29e-21 | 98.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g2424 | - | - | gmx:100784827 | 2248.78 |