Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2412 ATGAGTCGAGAGCTGCAGAAGAGGGGGAAACAAGAGAAAGGTTGTGATGGTGCTATGAAGGTTATTGTTGCTGTTAAGGCATCATCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCATTAACTCATGTTGTTCAACCTGGTGATTGCATTACACTTCTAGTGGTTGTTCCTTCGCAAACTTCAGGTAGAAAATGGGGTTTTCCTAGATTTGCTGGTGACTGTGCCAGTGGTATGAAGAAGTGTCCACCAGGAACAATTTTAGAGCAGAAGAGTGATATCACTGATTCTTGTTCTCAGATGATTCTTCAGCTTCATGATGTCTATGATCCAAATAAGATAAATGTCAGAATTAAAATTGTTTCCGGATCACCATGTGGATCAGTTGCTGCAGAAGCCAAGAAAGGACAAGCCAGTTGGGTTGTATTAGACAAACATCTCAAACCCGAGGAAAAGAAATGCATGGAAGAGCTGCAGTGTAACATTGTTGTTATGAAGCGTGCTCAACCGAAAGTGCTTCGCTTGAACTTGATTGGACCACAAAAGAAGGAAGTTGAAGAAGCAGGTACCTCACCTTCTGTGCAAGACGATATACTTGAAAATCATACCAAAAACAAGATTGATTCTCTAGTAGATTCTATCAAAGGACCGAATGTTACTCCAACTAGCAGCCCTGAGCTAGGGACACCATTCACTGTTACTACTGAAGCTGGTACTTCATCAGCTTCAAGCTCTGATCCCGGAACTTCACCGTTCTTTATATCAGAGATGAATAGTGAGTCAAAGAAAGAGGAAACCATTAAGGAAAGTCAAGAACTTTGTGATACTAATTCAGACACAGAAAGTGAAAGTCTTTCCACATCTTCGGCTAGCTTTAGATACCAACCGTGGATCACAGAATTGCTTTTACATCAACAATCATCTCAACGCAATGAAGAAAAATCAGAAACGTATCATGGTATGCCTCAAGCAACTACAACCAAAGCTTTGCTGGAAAAATATTCTAGGCTTGATAGAGGAGCTGGAATTGAAATGTCGGCAGCATATAGAAATGACGCAGATTTTAGTGGTAATTTAAGAGAAGCAATAGCATTATCTGGAAATGCTCCACTTGGTCCACCTCCATTGTGTTCAATATGTCAACACAAGGCACCTGTATTTGGAAAACCTCCAAGGTGGTTCAGCTATGCTGAGTTGGAACTCGCTACTGGTGGATTTTCACAAGCTAACTTCTTGGCAGAAGGAGGGTTTGGATCAGTTCATCGAGGGGTTCTACCAGAAGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAAGGTGATGTTGAGTTTTGCTCCGAGGTAGAAGTCTTGAGTTGTGCTCAGCACCGAAATGTTGTTATGCTTATTGGATTCTGTATAGAGGATAAGAGAAGGCTACTGGTTTACGAGTACATATGTAACGGATCATTGGATTCACATTTATATGGGCGACAGAGGGATCCATTAGAATGGTCCGCACGACAGAAAATTGCTGTTGGAGCTGCTCGTGGATTAAGGTATCTTCATGAAGAGTGCAGAGTTGGTTGTATCATCCACCGTGACATGAGGCCAAACAACATTCTCATAACTCATGATTTTGAACCTCTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACATGGGTGTGGATACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTTTATTCCTTTGGGGTGGTACTGGTGGAGCTTGTTACTGGTAGAAAAGCTGTTGATCTCACTAGGCCCAAGGGACAACAGTGCCTTGCTGAATGGGCACGGCCACTGTTAGAAGAATACGCCATTGACGAACTGATTGACCCGAGGTTGGGAGGTCACTATTTAGAACATGAAGTCTATTGCATGCTGCATGCTGCTTCATTATGCATAAGGAGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTCCGAATTCTAGAGGGTGACATGGTGGTGGACACAAATTACAATTCGACTCCAGGGTATGATGTTGGAAACAGGAGCGGTCGCATTTGGTCTGAGCCACTGCAGAGGCAGCACCAATACAGTGGTCCCCTCTTAGAAGATTCATTGGAGTCATCATTCAGTGGAAAGCTATCTATTGACAAGTACAAGCCTGCTTCTTATTGGGACAGGAGTAGGGACAAGCCAAGAAGAGCATCATGTGAAGATGATATTTGA 2271 0.4293 MSRELQKRGKQEKGCDGAMKVIVAVKASSKEIPKTALVWSLTHVVQPGDCITLLVVVPSQTSGRKWGFPRFAGDCASGMKKCPPGTILEQKSDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGSVAAEAKKGQASWVVLDKHLKPEEKKCMEELQCNIVVMKRAQPKVLRLNLIGPQKKEVEEAGTSPSVQDDILENHTKNKIDSLVDSIKGPNVTPTSSPELGTPFTVTTEAGTSSASSSDPGTSPFFISEMNSESKKEETIKESQELCDTNSDTESESLSTSSASFRYQPWITELLLHQQSSQRNEEKSETYHGMPQATTTKALLEKYSRLDRGAGIEMSAAYRNDADFSGNLREAIALSGNAPLGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPEGQVIAVKQHKLASSQGDVEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDMGVDTRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLAEWARPLLEEYAIDELIDPRLGGHYLEHEVYCMLHAASLCIRRDPHSRPRMSQVLRILEGDMVVDTNYNSTPGYDVGNRSGRIWSEPLQRQHQYSGPLLEDSLESSFSGKLSIDKYKPASYWDRSRDKPRRASCEDDI* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2412 756 ProSitePatterns Tyrosine protein kinases specific active-site signature. 527 539 IPR008266 GO:0004672|GO:0006468
Tpr5g2412 756 Pfam Protein tyrosine and serine/threonine kinase 410 675 IPR001245 GO:0004672|GO:0006468
Tpr5g2412 756 Gene3D Transferase(Phosphotransferase) domain 1 482 689 - -
Tpr5g2412 756 ProSiteProfiles Protein kinase domain profile. 406 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2412 756 SUPERFAMILY Protein kinase-like (PK-like) 390 682 IPR011009 -
Tpr5g2412 756 PANTHER OS01G0253100 PROTEIN 16 711 IPR045271 GO:0004714|GO:0006468
Tpr5g2412 756 MobiDBLite consensus disorder prediction 258 287 - -
Tpr5g2412 756 Gene3D Phosphorylase Kinase; domain 1 378 481 - -
Tpr5g2412 756 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 711 - -
Tpr5g2412 756 CDD STKc_IRAK 412 678 - -
Tpr5g2412 756 MobiDBLite consensus disorder prediction 258 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2412 Tpr-Chr5 45750232 45756211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2412 345 672 Trihelix Transcription Factor Family AT1G68690 50.000 7.52e-103 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Tpr5g2412 PK_Tyr_Ser-Thr 1.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2412 - - cam:101503019 1365.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2412 5 45750232 45756211 Tpr5g2412 5 45750232 45756211 ECH
Tpr7g4852 7 56494583 56499780 Tpr5g2412 5 45750232 45756211 PCT