Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2396 ATGGAGGAAACGCCTACAATCCTCCATGGAACCATTGAAGCTACCATCTTCAATACCTCACCTTACACACCCTTTTTTCCCTTCAATTGCATATGTACAAAGGGAAAGCCAGCTTATGTAACCATAAAGATAGACAACAAAAAGGTTGCAAAAACAAGCAAAGAAAGAAACCGTATTTGGAACCAAACCTTTCATATTCAATGTGCTCATCCAACTAATTCAATTATCACAATTACATTAAAATCATCAAATTCCATATTAGGAAAATATCATATCAAGGCCCAACAACTTTTAAATGAAGAAAGTTTTTTAATCAATGGATTATTCCCTCTTCTCATGGAAAATGAAATACCAAACCCAAAACTTAAATTGAAATTTATATTATGGTTTAAGCCTGCAAAATTGGAACAAAGTTTATCAAAGGTACTAAGCAATAGGGAATTTCAAGGACCAAAGGATGCAAAATTTCCACTAAGGTCTAATTGTCAAGTCAAACTTTATCATGATGCTCATCATTGTTCTACATTTCAACCTCCCTTTGATCCATGTGGTACTCCAAAAAATCTATGGGAGGATGTGTATAAAGCCATTGAGAATGCAAAGTATATAGTTTACATTGCAGCTTGGTCCCTCAATCCCATGATGGTTTTGATAAGAGATCCTCATACAGAAATGCAACATGCAAGAGGAATGAGTTTAGGTGAGCTATTGAAAAAGAAAGCAGATGAAGGAGTGGCTGTGAGAGTTATGCTTTGGGATGATGAAACATCATTGCCCTTAATTAAGAACAAAAGTCTAATGAACACACATGATGAGGATGCTGTGACATATTTCAACCATACAAAAGTAATATGCAAAAAATGTACTAGATTACACCACAAGTTTCCATCACTATTTTCTCACCATCAAAAAACTATAACAGTTGACACCAAAGTGCTTAAATCTGATAATGATAGACAAATTATGAGTTTTGTTGGTGGATTAGATTTATGTGATGGTAGATATGATACAGAACAACATTCATTGTTTCAAACACTCATTAAGGAATCACATTGTTATGATTTTTATCAACCAAACATTATAGGAGCTAACCTTAACAAAGGAGGACCAAGAATTCCTTGGCATGATTCTCATGCTTGTGTTATTGGCGAAGCGGCTTGTGATGTGTTAACAAATTTTGAGCAAAGATGGACAAAACAATGTGATCCTTCTCTTTTAGTCCCTTCTAGCACTTTGGTGAATCTTGTTCCTCAAGTAAACTCAAACACTTCAATAGAAAATAATAATTGGAAAGTTCAAGTTTATAGATCAATTGATCATGCTTCTGTTGATGATTTGTGTGGAAATTTCAATGCCGAGAGAAGCATCCATGAAGCTTATGTTGATGCAATTAGACATGCTGAGAAGTTTATATACATTGAAAACCAATACTTTATTGGAGGATGTCAATGGTGGGAAAAAGATAAGAATGTTGGTTGCACAAATTTGATTCCTATTGAAATTGCATTAAAAGTGGTTAGTAAGATCAAAGCAAAAGAGAGATTTGCAGTGTATATAGTTATACCAATGTGGCCAGAAGGAGTGGCTGAAAGTGAATCTGTTCAAGATATATTGTATTGGACAAGAGAAACTGTGGCAATGATGTATAGGTTGATTGGGGAAGCAATAAAAGAAAGTGGTGAAATTGGACATCCAAGAGATTACTTGAATTTCTTCTGTCTTGCAAATAGAGAGCATAAGGGAAAAGGAGAGTATCTTCCTTTAGATTCTCCTCATCCTGAAACAGATTATTGGAATGCACAGAAAAATAGAAGATTCATGGTTTATGTTCATTCCAAGCTCATGATAGTGGATGACATGTACATATTAATAGGTTCAGCTAACATTAACCAAAGATCAATGGATGGGAAAAGGGACACTGAAATTGCAATAGGATGCTTCCAAATTCAAGATGAAGTTGAGAAACAAATGAACCTTAGTGATGTTCATGCATATAGAATGTCACTATGGTATGAACACACAAATAGTTTCAATGAATTGTTCTTAGAGCCACAAAGTTTGGAATGTGTGAAAATGATGTGTTCAATTGGTGATCAAATGTGGGAAATTTATAGCAATGAAGAAATTGTTGACATGGAAGGTGTGCACCTTGTTAGTTACCCTATGAGAATAACACAAGAAGGGTATGTGAAAGATTTGAGTAATGGAGTTTATTTTCCTGATACAAATTGTCTAGTGAAGGGGAAGAGATCTACATTGTTGCCCCCTAACTTGACTACTTAG 2283 0.3473 MEETPTILHGTIEATIFNTSPYTPFFPFNCICTKGKPAYVTIKIDNKKVAKTSKERNRIWNQTFHIQCAHPTNSIITITLKSSNSILGKYHIKAQQLLNEESFLINGLFPLLMENEIPNPKLKLKFILWFKPAKLEQSLSKVLSNREFQGPKDAKFPLRSNCQVKLYHDAHHCSTFQPPFDPCGTPKNLWEDVYKAIENAKYIVYIAAWSLNPMMVLIRDPHTEMQHARGMSLGELLKKKADEGVAVRVMLWDDETSLPLIKNKSLMNTHDEDAVTYFNHTKVICKKCTRLHHKFPSLFSHHQKTITVDTKVLKSDNDRQIMSFVGGLDLCDGRYDTEQHSLFQTLIKESHCYDFYQPNIIGANLNKGGPRIPWHDSHACVIGEAACDVLTNFEQRWTKQCDPSLLVPSSTLVNLVPQVNSNTSIENNNWKVQVYRSIDHASVDDLCGNFNAERSIHEAYVDAIRHAEKFIYIENQYFIGGCQWWEKDKNVGCTNLIPIEIALKVVSKIKAKERFAVYIVIPMWPEGVAESESVQDILYWTRETVAMMYRLIGEAIKESGEIGHPRDYLNFFCLANREHKGKGEYLPLDSPHPETDYWNAQKNRRFMVYVHSKLMIVDDMYILIGSANINQRSMDGKRDTEIAIGCFQIQDEVEKQMNLSDVHAYRMSLWYEHTNSFNELFLEPQSLECVKMMCSIGDQMWEIYSNEEIVDMEGVHLVSYPMRITQEGYVKDLSNGVYFPDTNCLVKGKRSTLLPPNLTT* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2396 760 PANTHER PHOSPHOLIPASE D ALPHA 5 760 - -
Tpr5g2396 760 Gene3D Endonuclease Chain A 169 429 - -
Tpr5g2396 760 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 297 334 IPR001736 GO:0003824
Tpr5g2396 760 SUPERFAMILY Phospholipase D/nuclease 158 408 - -
Tpr5g2396 760 Pfam Phospholipase D Active site motif 299 334 IPR001736 GO:0003824
Tpr5g2396 760 PIRSF PLD_plant 8 760 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Tpr5g2396 760 PANTHER PHOSPHOLIPASE D 5 760 IPR015679 -
Tpr5g2396 760 Pfam PLD-like domain 608 657 IPR025202 -
Tpr5g2396 760 Gene3D Endonuclease Chain A 447 661 - -
Tpr5g2396 760 Gene3D C2 domain 33 130 IPR035892 -
Tpr5g2396 760 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 606 633 IPR001736 GO:0003824
Tpr5g2396 760 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 34 126 IPR035892 -
Tpr5g2396 760 Pfam C2 domain 38 100 IPR000008 -
Tpr5g2396 760 SUPERFAMILY Phospholipase D/nuclease 431 689 - -
Tpr5g2396 760 SMART pld_4 606 633 IPR001736 GO:0003824
Tpr5g2396 760 SMART pld_4 297 334 IPR001736 GO:0003824
Tpr5g2396 760 Pfam Phospholipase D C terminal 679 749 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2396 Tpr-Chr5 45616831 45621343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2396 30 760 Phospholipase D Gene Family (Wang group) AT1G55180 60.324 0.0 921
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2396 K01115 - gmx:100812642 1239.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2396 5 45616831 45621343 Tpr5g2396 5 45616831 45621343 ECH
Tpr7g4848 7 56442976 56446987 Tpr5g2396 5 45616831 45621343 PCT