Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2394 ATGGATACTATTTGGATTCTGTTAATGACACCAATTTTCTTGTGCAGTTTGATTCTTTGCATAAACAAACTTAGTCATAAGCTCAAATCAAAACACAGAAATCAGCTTCCACAAGGCACTCTTGGATGGCCTTTTATTGGTGAAACCATAGATTTTATTTCTTGTGCTTACACCGATCGTCCTGAGAGCTTCATGAACAAGCGACGCGCCATGTATGGTAAGGTGTTCAAGTCACACATATTTGGAAGTGCTACTATTGTTTCAACAGATGCAGATGTGAACAAATTTATACTACAAAGTGATGCAAAAGTTTTTGTTCCTTCATATCCTAAGTCCTTGATGGAGTTAATGGGAGAGTCTTCTATTTTGCTCATCAATGGAACCTTACAAAGGAGAATACATGGACTTATTGGAGCTTTTTTCAAGTCTCAACAGTTAAAGGTTCAGATTACCAAAGATATGCAGAAGTATGTTCAAGAATCAATGGAAAATTGGAAAGAGGATCAACCTATATACATACAAGATGAAACAAAAAAGATTGCATTTCATGTACTAGTGAAGGCATTGATTAGTTTGGAACCAGGTGAAGAAATGGAACTTCTAAAAAAACATTTTCAAGAATTTATATCTGGCCTAATGTCTTTGCCAATTAACCTACCAGGAACAAAACTTTATCAATCTTTACAGGCAAAAAAGAAAATGGTGAAATTAGTGAGAAAAAATATCCAAGCTAGAAGAAATAAAGACATCTTTGAAGTTCCAAAAGATGTAGTGGATGTGCTTCTTAATGATACAAGTGAGAAATTAACAGATGATTTAATAGCAGATAATATTATTGATATGATGATTCCTGGAGAGGATTCAGTTCCAGTTCTTATGACTCTAGCTACAAAGTACTTATCAGAATGCCCTGCTGCTTTGCAACAATTGACGGAGGAAAATATAAAGATCAAGAAACTCAAAGATGAGATTGGGGAGCCTATGTGTTGGAGTGATTACTTATCATTGCCATTTACTCAAAAAGTTATAACAGAAACTTTGAGAATGGGAAATATCATAAATGGTGTTATGAGAAAGGCCTTAAAAGATGTTGAAATAAAAGGGTACTTGATACCACAAGGATGGTGTGTGTTTGCAAATTTTAGATCAGTTCATCTAGATGAGAAAAACTATGAGTGCCCTTATCAATTCAATCCATGGAGGTGGCAAGATAAGGACATGAACTGTAACAATTTCACTCCTTTTGGAGGGGGGCAAAGGCTATGTCCTGGCCTTGACTTGGCCAGGTTGGAAGCTTCTATCTTTCTACACCACCTTGTTACTCAGTTCAGATGGTATGCAAAAGAAGATACAATAGTGAACTTCCCTACAGTAAGAATGAAAAGAAGGATGCCTATCTTACTAAAGAGGGTGTAA 1416 0.3581 MDTIWILLMTPIFLCSLILCINKLSHKLKSKHRNQLPQGTLGWPFIGETIDFISCAYTDRPESFMNKRRAMYGKVFKSHIFGSATIVSTDADVNKFILQSDAKVFVPSYPKSLMELMGESSILLINGTLQRRIHGLIGAFFKSQQLKVQITKDMQKYVQESMENWKEDQPIYIQDETKKIAFHVLVKALISLEPGEEMELLKKHFQEFISGLMSLPINLPGTKLYQSLQAKKKMVKLVRKNIQARRNKDIFEVPKDVVDVLLNDTSEKLTDDLIADNIIDMMIPGEDSVPVLMTLATKYLSECPAALQQLTEENIKIKKLKDEIGEPMCWSDYLSLPFTQKVITETLRMGNIINGVMRKALKDVEIKGYLIPQGWCVFANFRSVHLDEKNYECPYQFNPWRWQDKDMNCNNFTPFGGGQRLCPGLDLARLEASIFLHHLVTQFRWYAKEDTIVNFPTVRMKRRMPILLKRV* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2394 471 Pfam Cytochrome P450 37 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2394 471 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Tpr5g2394 471 Gene3D Cytochrome P450 26 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2394 471 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 21 466 - -
Tpr5g2394 471 SUPERFAMILY Cytochrome P450 31 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2394 471 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2394 471 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2394 471 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2394 471 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2394 471 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2394 471 PANTHER CYTOCHROME P450 26 21 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2394 Tpr-Chr5 45604705 45608585 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2394 26 444 Cytochrome P450 AT3G13730 67.453 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2394 K12638 - gmx:100797868 809.29