Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2379 ATGGCTATGGCTTCTTCTTCAACTTCCTCTAATACCTTTGATCTGAAAAAATATGATGTTTTCATTAGCTTTAGAGGCGATGACACTCGAGCTGGTTTCACAAGCCATCTTCATGCTGCCTTAAAGCGAATCTATTTGGAGACTTACATAGACTACAGGATTGAAAAAGGAAACCAAGTCTGGGCAGAACTTGTGGAAGCAATCAAAGGTTCCACTCTATTTCTTGTTGTGTTCTCTGAAAACTATGCGTCTTCAACATGGTGTTTGAATGAACTCGTTGAAATAGTGGAGTGCCACAAAAATGGACAAGTTGTTATTCCTGTGTTCTACCAAATTGACCCTTCACATGTTCGGAAGCAGACCGGAAGTTATGGCACTGCGATGGCAAAACACAAGAAGCAAGGGAACAATGATGATAAGATGATGCAAATTTGGAAGAATGCTCTTTCTCAAGCTGCTAATTTATCGGGTTTTGATTCTATATCATACAGGACCGAATCTGACTTGATTGAAGACATTACTAAAGTTGTATTACAAAAGTTAAACCACAACTACACAAGTGAGCTTGCATGTAATTTCATATTGGATGATAACTATTGGAGCATTCAACCTTTAATAGAAAAAAATGATTCATCAAAAGTTCAAATAATTGGACTTTGGGGCATGGGGGGCATAGGCAAGACAACACTTGCTGCTGCTATTTTCCACAAAGTCTCTTTTCAGTATGACGGCAGTTGCTTCTTAGACAATGTGAATGAAATTGCAAAAATTCATGGAATCAACTATACATGTAACAAACTTCTTTCCAAGTTACTAAGGGAAGATCTTCATATTGACAATTCTAAAGTAATACCATCCATAATCATTAGAAGACTCAAACGCATGAAATCTTTTATTGTATTAGATGATGTACATACTTTAGAGTTTCTACAAAACTTGATTGGAGTGGGATGTGGTTGGCTAGGAGCTGGTAGCACAGTCATTGTGACGACAAGGGATAAGCAGGTGCTGATAAGTGGAGGAATTCAAAAAATTCATGAAGTTAAGAAGATGAACTCCCGAAACTCTCTTCAACTTTTTAGCTTGAATGCTTTTGGCAAAACTTTACCTAAGGAGGGATTCGTGGAGCTCTCAGATAGAGCAGTTGATTATGCTGACGGCAACCCTTTAGCACTGAAAGTATTAGGATCATTTCTTCGTTGCAAAAGTGAAATAGAATGGAAATGTGCACTAGCTAAACTGGAGGAAATTCCTAATGCAGAAATTGATAGGATATTGAGATGGAGTTATAATGAATTGGATGATAAAGAGAAAAATATATTTTTGGATATTGCATGCTTTTTCAAAGGACATGAGAGGGAAAAGATAACAAAAACATTAAATGAGTGTGGTTTCTTTGCAGATATAGGGATAAGACTTCTTTTAGACAAAGCTCTTATAAGACTTGACTTCAGAAATTGCATACAAATGCATGACTTAATACAAGAAATGGGAAAACAAATTGTTCGTGAAGAATGTCTTAAAAATCCCGAACAACGCAGTAGATTATTTGATCCCAAGGAGGTTTGTGGCGTGTTGAAAAATAATAGAGGAACTGAGATTGTTGAAGCCATATTTTTAGTTGCTAATCAATGTACAAATATAAATTTAAGCCCAAAAGCATTTGAAAAGATGGTAAATCTACGGTTACTTGCTATTCATGACCCAAAGGGATATGTAAGTCTTCCACATGGTCTCGACTTATTGCCAGAAAATTTGAGATATGTTTTGTGGGATGGATATCCATGGAAATCTCTGCCTCCAACCTTTCGTCCTGACATGCTTGTGGAGCTTTCCTTGAGAGAAAGCCATGTACAAAAACTTTGGAACGGAGTATTGAATTTGCCAAATTTAGAGATACTTGACCTTAGTCGCTCCAAAAAGCTGATAGAATGTCCAAATGTGTCTGGTTTCCCGAATCTAAAAGAAGTAATACTTGGTGATTGTGATAGCTTGCATGAAGTTGATTCATCAATTTTCCTTCTCCAAAAGCTTACAAGAATATTCATGGCTGGATGTACGTCACTAAAGAGCCTTTCGAGTACCACTTGTTCACCAGCCCTCACTGAATTAAATGCTGTGGGTTGCATCAATCTCCAAGAGTTCTCTGTCACATTTTCTTCCGTTGATAATTTGTTTCTGGCTTTATCAAAGTTTGGTGGGAATGAACTTCCATCATCAATATTGCAAACAAAAAATCTTAATTTGTTTATCTTTCCCATGATTGGATATCTTGTGAATCTTCCTGAAAACTTTGCTAAAAATATTTTCCTCATGAGTTCAGTGAATCGTGACAATGTCGACCCTTCCATCATCTTACATAAATTACTTTCTAGTCCTTCCTTCATGACTGTAACACACTTAAACTTGACCAATATTTCTCTCTTGTTTGAAATCCCAGACAATATCTTCTTACTATCATCATTAGAGACTTTAACACTAATTGGTCTGGCCATTAGAAGCTTGCCTGAAACCATCAAGTATCTTCCTCGACTCGCTGAGTTTGGTGTTTACGATTGTAAACTGCTTCAATCTATTCCGGCATTTTCACATTTCATTAAATCTTTAGTTGTCTGGAATTGTGAATCTCTTGAGAAACTGTCGAGTTCAATGGGTGAACCACATGAAAAAACAAATCCTGGTTTTACTATGCTCCTTAACTGCAATCAATTGGATCTACATTCATACAGAGCAGTTTTAAAAGATGCTCTTGGTGGAATTGATCTTAGAGCAAGACTAAGTTCACAATATGAAATCATGTATTTATTCAATGAATATTTTTTACCTGATATGCCTGGCAGAGAATTTTGGTTCCATTACCGTTCTACACAAGTTTCTTTCACTCTTGAGCTTCCTTCTAATTTATTTGGTTTTGCCTACTACTTGGTTATTTCCCAAGGCCGTGTGGAAAATGGCGCATATTTTCGATGTGAGTGTTATGTGGACAATAGTGTTACTATAACAAGTTTCACGAGAGTCAAAATCATAGAGCATCAATATTGGACTAATCTTGACAATTCAATTCACATGATGTCAGATCATTTAGTTTTATGGTATGATCCAGTAAGTTGCAAGCAGATAATGGATGAAATAAAAGCCATTAAGGATGTGAACAACAGTGGTTACAATCCAAAACTTACATTTAGATTCTTCATTGATCAAAGTGAAACTCTATATGATGAAGTATCGATAAAAGAGTGTGGATTTCGCTGGATATATCAAGAAAATATAGTTCCTCACACAATTTTTGAGTCCGATGATGAAGAAGAAGAAGAAGAAATAATTCCTATTTTTGAGTCCAGTGATGAAGAAAAAGAAGAAGAAGAAATAGTTCCTCGCACAATTTTTGAGTCCCACGAAGAAAAAGAAGACGAAGAAGAAACAATTCGTCCAAAAAAGAAATTATGTTGCAGGTTTTTTCATAAAAAAAATAATCACTTTTTGTAA 3486 0.3592 MAMASSSTSSNTFDLKKYDVFISFRGDDTRAGFTSHLHAALKRIYLETYIDYRIEKGNQVWAELVEAIKGSTLFLVVFSENYASSTWCLNELVEIVECHKNGQVVIPVFYQIDPSHVRKQTGSYGTAMAKHKKQGNNDDKMMQIWKNALSQAANLSGFDSISYRTESDLIEDITKVVLQKLNHNYTSELACNFILDDNYWSIQPLIEKNDSSKVQIIGLWGMGGIGKTTLAAAIFHKVSFQYDGSCFLDNVNEIAKIHGINYTCNKLLSKLLREDLHIDNSKVIPSIIIRRLKRMKSFIVLDDVHTLEFLQNLIGVGCGWLGAGSTVIVTTRDKQVLISGGIQKIHEVKKMNSRNSLQLFSLNAFGKTLPKEGFVELSDRAVDYADGNPLALKVLGSFLRCKSEIEWKCALAKLEEIPNAEIDRILRWSYNELDDKEKNIFLDIACFFKGHEREKITKTLNECGFFADIGIRLLLDKALIRLDFRNCIQMHDLIQEMGKQIVREECLKNPEQRSRLFDPKEVCGVLKNNRGTEIVEAIFLVANQCTNINLSPKAFEKMVNLRLLAIHDPKGYVSLPHGLDLLPENLRYVLWDGYPWKSLPPTFRPDMLVELSLRESHVQKLWNGVLNLPNLEILDLSRSKKLIECPNVSGFPNLKEVILGDCDSLHEVDSSIFLLQKLTRIFMAGCTSLKSLSSTTCSPALTELNAVGCINLQEFSVTFSSVDNLFLALSKFGGNELPSSILQTKNLNLFIFPMIGYLVNLPENFAKNIFLMSSVNRDNVDPSIILHKLLSSPSFMTVTHLNLTNISLLFEIPDNIFLLSSLETLTLIGLAIRSLPETIKYLPRLAEFGVYDCKLLQSIPAFSHFIKSLVVWNCESLEKLSSSMGEPHEKTNPGFTMLLNCNQLDLHSYRAVLKDALGGIDLRARLSSQYEIMYLFNEYFLPDMPGREFWFHYRSTQVSFTLELPSNLFGFAYYLVISQGRVENGAYFRCECYVDNSVTITSFTRVKIIEHQYWTNLDNSIHMMSDHLVLWYDPVSCKQIMDEIKAIKDVNNSGYNPKLTFRFFIDQSETLYDEVSIKECGFRWIYQENIVPHTIFESDDEEEEEEIIPIFESSDEEKEEEEIVPRTIFESHEEKEDEEETIRPKKKLCCRFFHKKNNHFL* 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2379 1161 MobiDBLite consensus disorder prediction 1114 1140 - -
Tpr5g2379 1161 SUPERFAMILY "Winged helix" DNA-binding domain 421 527 IPR036390 -
Tpr5g2379 1161 SUPERFAMILY L domain-like 543 883 - -
Tpr5g2379 1161 Gene3D - 350 434 IPR042197 -
Tpr5g2379 1161 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 1106 IPR044974 GO:0006952
Tpr5g2379 1161 Pfam TIR domain 17 188 IPR000157 GO:0007165
Tpr5g2379 1161 Gene3D - 15 178 IPR035897 -
Tpr5g2379 1161 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 444 IPR027417 -
Tpr5g2379 1161 MobiDBLite consensus disorder prediction 1120 1140 - -
Tpr5g2379 1161 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 1106 - -
Tpr5g2379 1161 ProSiteProfiles TIR domain profile. 16 181 IPR000157 GO:0007165
Tpr5g2379 1161 Pfam NB-ARC domain 205 432 IPR002182 GO:0043531
Tpr5g2379 1161 Gene3D Ribonuclease Inhibitor 772 900 IPR032675 -
Tpr5g2379 1161 SMART till_3 17 155 IPR000157 GO:0007165
Tpr5g2379 1161 Gene3D - 179 340 IPR027417 -
Tpr5g2379 1161 PRINTS Disease resistance protein signature 216 231 - -
Tpr5g2379 1161 PRINTS Disease resistance protein signature 291 305 - -
Tpr5g2379 1161 PRINTS Disease resistance protein signature 385 399 - -
Tpr5g2379 1161 PRINTS Disease resistance protein signature 626 642 - -
Tpr5g2379 1161 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 158 IPR035897 -
Tpr5g2379 1161 Gene3D Ribonuclease Inhibitor 495 728 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2379 Tpr-Chr5 45346317 45353340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2379 16 854 WRKY Transcription Factor Family AT4G12020 31.469 6.17e-91 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2379 - - mtr:MTR_8g018480 1501.88