Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2377 ATGGCTTGTTCATCCTCTCAAGCTACGACTACAGTAGATCTGAAAAAATATGATGTTTTCATCAGCTTTAGAGGAGATGACACTCGCCCTGGTTTCACAAGTCATCTTCACGCTGCTTTGAAACGAAAAAATTTGGAGACGTACATAGACTACAGGATTGAAAAAGGAAACCAAGTTTGGACAGAACTTGAGAAAGCAATCAAAGATTCCAGTCTGTTTCTTGTTGTGTTCTCGGAGAACTACGCGTCTTCAACATGGTGTTTGAATGAACTGGTTGAAATAATGAAATGTCATAAAAATGGACAAGGTGTTGTTATTCCTTTGTTCTACCGAATTGATCCTTCACACGTTCGGAAGCAGACTGGGAGTTATGGCACTGCGTTGGAAAAACACAAGAATGATGATAAGATGATGCAAAATTGGAAGAATGCTCTTACTCAAGCAGCTAGTTTATCTGGTTTTGCTTCTACTACCACATCCGGGACGGAATCAGATTTGATTGAAGACGTTACCAGAGTTGTATTAGGAAAGTTAAACCACAACAAAACAAATGAGCTTACATGTGATTTCATAATGGATGAAAACTACTGGACAATTCAATCTTTAATAAAAAAAAGGGATTCATCAGAAGTTAAAACCATTGGACTTTGGGGCATGGGGGGTATAGGCAAGACAACACTTGCTACTGTTATGTTTCACAAATTTTCTTCTCAGTATGAAGGCAGTTACATCTTAGAAAATGTGACGGAAGTTTCAAAAACGCATGGAATTAACTATACATGCAACAAACTTCTTTCCAAGTTACTAAGGGAATATGTTGATATTGACACTTCTAAAGTAATACCATCCATAATCATTAGAAGACTCAAACGCATGAAATCTTTGATTGTACTTGACAATGTGCATACTTCAGAACTTCTGCAAAACTTGATTGGAGTGGGAAGTGGTTGGCTAGGAGCTGGTAGCACGGTCATTGTGACGACAAGGGATAAGCAGGTGCTGATAAGTGGAGGAATTGAAGAAATTTATCAAGTTAAGAAGATGAACTCCCTAATCTCTCTCCAACTTTTTTGCTTGAATGCTTTTGGCAAATACTTACCTAAGGAGGGATATGTGGAGCTTGCAGAAAGAGCAATTGATCATGCCCAAGGCAACCCTTTAGCTTTGAAAGTGTTTGGATCATTTCTTCGTGGCAAAAGTGAAATAGAATGGAACTGTGCACTAGCTAAACTAAAGGAAATTCCCAATGGAAAAATTGATAGGATATTGAGATGGAGTTATGATGAATTGGATGATCAAGAGAAAAATACATTTCTAGACATTGCATGCTTTTTCAAAGGACATGAACAGGATATGGTAACAAAAATATTAAATGAGTGTGGTTTCTTTGCATATAGTGGGATAAGACATCTTTTAGACAAAGCTCTTATAACAGTTGACCTTAAAAATTGCATACAAATGCATGACTTGATACAAGAAATGGGAAAACAAATTGTTCGTGAAGAATCTCTTAAAAATCCCGAACAACGCAGTAGATTATGTGATCCTAAGGAAGTTGGTGACATGTTGAAAAATAATAGAGGAACTAAGATTGTTGAAGCCATATTTTTTAATGCTGATGAATATACAAATATAAATTTAAGCCCCAAAGCATTTAAAAAAATGGTAAACCTAAGGTTACTTGCTATTCAAGACCAAAAGGGATATGTAAGCCTTCCATATGGTCTTGACTTATTGTCAACAAATTTGAGATATTTTTCTTGGCATGGATATCCATTGAAGGCTCTACCTCCAGCCTTTTGTCCTGAAATGCTTGTGGAGCTTTGTTTGATAGAAAGCAATGTACAAAAACTTTGGAAAGGAGTACTGCATTTGCCAAATTTAGAGAGACTTGACCTCAGTCGCTCCAAAAAATTGATAGAGTGCCCAAATGTGTCTGGTTGCCCGAATCTAAAAGTTTTAATACTTGATAATTGTGATAGCTTGCCTGAAGTTGATTCATCAATTTTCCTTCTCCAAAAGCTTGAACGATTATGGATGGCTGAATGTACGTCACTAAAGAGCCTTTCCAGTAACACTTGTTCACCAGCCCTCACTGAATTAGATGCAACGCATTGCATCAGTCTCCAAGAGTTCTCAGTCACATTTGCTTCCACTGATGGTTTGGTTTTGTTTTTACCAGATAGTTGGAATGGGAATGAACTTCCATCATCAATATTGAATAAAACAAATCTTGGAACCTTTCAATTTCCTTTGATTGAATGTCTTGTCGATCTTCCTGAAAACTTTGCCAATTGTATTTCCCTCCATAGTCCACGAAATCGTGAACTTGACCATTCCATCACCTTACATAAATTACTTTCTAGTCCTGCTTTCACCACTTTAAAACACTTAATCATTTCTAGTATCCCTATGTTGTCTGAAATCTCAGACAACATCTCCTTACTATCATCATTAGAGACTTTAGAACTATATAATATTGGCATTAGAAGCTTGCCCGAAACCATTAAGTATCTTCCCCGACTCTACCGGCTTTATGTTAGTTTTTGTGAAATGCTTCAATCTATTCCGATGCTTCCACTCAATCTAGTCAATTTCACTGTCTTAGATTGTAAATCTCTTGAGACAGTGTTGAGTTCAATGGATGATCCATATGACAAACCCAATCCCAGTACTGTTATTCTCCGTGACTGCAAACAATTGGATCCGCATTCGTATCAGACAGTTTTGAACAATGCTATTGCTGCGATTGAACTTGGAGCAACTGGAGAAGATAATAGTAGCATTCAGTACCTGTTACCTGAAATGCCTGGCAGAGAGTATCAGTTCCAATTCCATTACCGTTCTACACAAGTTTCAATGACTCTTGAGCTTCCTCCTAATTTGTTGGGTTTTGCCTATTATTTGGTTCTTTCTCAGGGCTGGGTGGGAGAAGGTGCCCGTTTTGGATGTGAGTGCTACTTGGACAGTAGTTCAGTTGAAAGGATCTGTATAACAAGATTCCCTAGACTCGACATGTTCATATATGGCACGTGTTATGGTTATGAGATTATAATCGACATCGCGTCAGATCATGTGGTTTTATGGTATGATCCAGTATCTTGCAATCAGATAATGAAAGCAGTTGAAGAAATAAAAGCCATTAATGATGTGAACAGCACCAGTTACAATCCAAAGCTTACATTTAGATTCTTTATTGATGAAAATAAAACTCCATATGATGTAGCAATAAAAGAGTGTGGGTTTCACTGGATATATAAAAAAGAAACAGTTCCTCCAACAAGGAAATTAAAGCAACATGTCTTTGGAACTCCAATGGCAAGCCTAGAATTAGATGAAACAAAAGGCTTGAGGTATTTACTTGAATAA 3369 0.3719 MACSSSQATTTVDLKKYDVFISFRGDDTRPGFTSHLHAALKRKNLETYIDYRIEKGNQVWTELEKAIKDSSLFLVVFSENYASSTWCLNELVEIMKCHKNGQGVVIPLFYRIDPSHVRKQTGSYGTALEKHKNDDKMMQNWKNALTQAASLSGFASTTTSGTESDLIEDVTRVVLGKLNHNKTNELTCDFIMDENYWTIQSLIKKRDSSEVKTIGLWGMGGIGKTTLATVMFHKFSSQYEGSYILENVTEVSKTHGINYTCNKLLSKLLREYVDIDTSKVIPSIIIRRLKRMKSLIVLDNVHTSELLQNLIGVGSGWLGAGSTVIVTTRDKQVLISGGIEEIYQVKKMNSLISLQLFCLNAFGKYLPKEGYVELAERAIDHAQGNPLALKVFGSFLRGKSEIEWNCALAKLKEIPNGKIDRILRWSYDELDDQEKNTFLDIACFFKGHEQDMVTKILNECGFFAYSGIRHLLDKALITVDLKNCIQMHDLIQEMGKQIVREESLKNPEQRSRLCDPKEVGDMLKNNRGTKIVEAIFFNADEYTNINLSPKAFKKMVNLRLLAIQDQKGYVSLPYGLDLLSTNLRYFSWHGYPLKALPPAFCPEMLVELCLIESNVQKLWKGVLHLPNLERLDLSRSKKLIECPNVSGCPNLKVLILDNCDSLPEVDSSIFLLQKLERLWMAECTSLKSLSSNTCSPALTELDATHCISLQEFSVTFASTDGLVLFLPDSWNGNELPSSILNKTNLGTFQFPLIECLVDLPENFANCISLHSPRNRELDHSITLHKLLSSPAFTTLKHLIISSIPMLSEISDNISLLSSLETLELYNIGIRSLPETIKYLPRLYRLYVSFCEMLQSIPMLPLNLVNFTVLDCKSLETVLSSMDDPYDKPNPSTVILRDCKQLDPHSYQTVLNNAIAAIELGATGEDNSSIQYLLPEMPGREYQFQFHYRSTQVSMTLELPPNLLGFAYYLVLSQGWVGEGARFGCECYLDSSSVERICITRFPRLDMFIYGTCYGYEIIIDIASDHVVLWYDPVSCNQIMKAVEEIKAINDVNSTSYNPKLTFRFFIDENKTPYDVAIKECGFHWIYKKETVPPTRKLKQHVFGTPMASLELDETKGLRYLLE* 1123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2377 1122 Gene3D - 14 185 IPR035897 -
Tpr5g2377 1122 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 1005 - -
Tpr5g2377 1122 Pfam TIR domain 16 185 IPR000157 GO:0007165
Tpr5g2377 1122 Gene3D - 187 340 IPR027417 -
Tpr5g2377 1122 Pfam NB-ARC domain 200 429 IPR002182 GO:0043531
Tpr5g2377 1122 Gene3D Ribonuclease Inhibitor 725 913 IPR032675 -
Tpr5g2377 1122 Gene3D Ribonuclease Inhibitor 481 724 IPR032675 -
Tpr5g2377 1122 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 1005 IPR044974 GO:0006952
Tpr5g2377 1122 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 441 IPR027417 -
Tpr5g2377 1122 ProSiteProfiles TIR domain profile. 15 178 IPR000157 GO:0007165
Tpr5g2377 1122 Gene3D - 348 431 IPR042197 -
Tpr5g2377 1122 SUPERFAMILY L domain-like 486 899 - -
Tpr5g2377 1122 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 154 IPR035897 -
Tpr5g2377 1122 SMART till_3 16 151 IPR000157 GO:0007165
Tpr5g2377 1122 PRINTS Disease resistance protein signature 213 228 - -
Tpr5g2377 1122 PRINTS Disease resistance protein signature 288 302 - -
Tpr5g2377 1122 PRINTS Disease resistance protein signature 382 396 - -
Tpr5g2377 1122 PRINTS Disease resistance protein signature 623 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2377 Tpr-Chr5 45334229 45372238 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2377 15 845 WRKY Transcription Factor Family AT4G12020 31.014 1.05e-88 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2377 - - mtr:MTR_8g018480 1450.65