Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2376 ATGGCTTCTTCATCCTCTCAAGATGTGACTACAGTAGATCTGAAAAACTATGATGTTTTCATCAGCTTTAGAGGTGATGACACTCGCGCCGGTTTCACCAGCCATCTTTACACTGCTTTGTGCGGAGACCATTTGCATACCTACATAGACTACAGGATCCAAAAAGGAGATGAAGTTTGGGCAGAACTTGTGAAAGCAATTCAAGATTCCACTCTGTTTCTTGTTGTCTTTTCAGAGAACTATGCAACTTCAACATGGTGTTTGAATGAACTCGTTGAAATAATGGAGTGCCACAAAAATGGACAAATTGTTGTTCCTGTGTTCTACCAAGTTGACCCTTCACATGTAAGGAAACAAACTGGGAGTTACGGCAGTGCGTTGGCAAAACACAAGAAGCATGGCAATAATGATGATAAGATGATGCAAAATTGGAAGAATGCTCTTTTTCAAGTGGCTAATTTATCTGGTTTTCATTCTACCAATTACAGGACCGAATCTGCCTTGATTGAAGATATTACCAGAGTTGTATTGAGAAAGTTAAACTACAACAACACAAATGATCTTACATGTAATTTCATATCGGATGAAAACTATTGGAGCATTCAAGCTTTAATGAAAAAAATTGATTCAACAGAAATTCAAATAATTGGACTTTGGGGCATGGGGGGCATAGGTAAGACAACACTTGCTGCTGCTATCTTTCACAAAGTATCTTTTCAGTATGAAGGTAGTTGCTTCTTAGAAAATGTGACAGAAGTTTCAAAAATGCATGGAATTAACTATACATGCAACAAACTTCTTTCAAAGTTGCTAAAGAAAGATTTTGACATCGACACTTCTAAAGTAATACCATCTATGATCATTAGAAGACTCAAACGAATGAAATCTTTTATTGTACTAGATGATGTAAATACTTTAGAACTTCTGCAAAACTTGATTGGAGTGGGACAAGGTTGGCTAGGAGTTGGTAGCACTGTCATTGTGACAACAAGGGATAAGCATGTTCTGATAAGTGGAGGAATTGAAAAAATTCATCAAGTTAAGAAGATGAATTCCCGAAACTCTCTCCAACTTTTTAGGTTGAATGCTTTTAACAAAGTCTTACCTAAGGAGGTATATGAGAAGCTCTCGGAAAGAGCAATTGATTATGCCAAAGGCAACCCTTTAGCTCTGATAGTATTAGGGTCACTTCTTCGTGATAAAAGTGAAATAGAATGGAATTGTGCTCTAGCTAAACTGAAGGAAATTCCCAATGGAAAAATTGATAAGATATTGAGATGGAGTTATAATGAATTGGACGAGAAAGAGAAAAACATATTCTTGGACATCGCATGCATTTTGAAAGGTTATAAACGGGATTGGGTGACAAAAATATTAAATGAGTGTGGCTTCTTTGCAGATATAGGAATAAGACATCTTGTAGACAAGGCTCTTATAAGAGTTGACTCTGAAAATTACATACAAATGCATGACTTGATACAAGAAGTGGGAAAGCAAATTGTTCGCGAAGAATCTCCTAAAAATCCCGGACAACGCAGTAGATTATGTGATCCTAAGGAAGTTTGTGACGTTTTGAAAAATAATAGAGGAACTGAGATTGTTGAAGCCATATTTTTTGATGCTACTGAATATGCAAATATAAACTTAAGTCCCAAAGCATTTGAAAATATGGTAAACTTAAGGTTACTTGTTTTTCGAGACCACAAGGAGATTAAATCTGTAAGTCTTCCACATGGTCTTGAATTATTGCCAGAAAATTTGAGATATTTTTTGTGGGATGGATATCCATGGAAGTCTTTGCCTCCAACCTTTTGTGCTGAAATGCTAGTGGAGCTTTCCATGCAAAACAGTCGTGTAGAGAAACTTTGGAATGGAGAAATGAGTTTGCCAAATTTGGAGACACTTAACCTCACTGGCTCCAACAAGTTGATAGAGTGTCCAAATGTGTCTGGCTCCCCAAATCTAAAACTTGTAACATTTAATTACTGCAAAAGTTTGCCTGAAGTTGATTCTTCAATTTTCTTTCTCCAAAAGCTGATAACTTTAAAGGTGATGGGATGTACATCACTTAAGAGCCTTTCAAGTAACACTTGTTCACCAACCCTCACTGAGTTATATGCTATGGAATGTATCAATCTCCAAGAGTTCTCAGTCACATTTACTTCCTTTGATCGTTTGCGTTTGGGTATATCAGAGTGGGGTGGGAATGAACTTCCATCATCATTATTGAATAAAAAAAATCTTGATATTTTTTACTTTCCTATAATTGAATGTCTTGTGGATCTTCCGGAAAACTTTGCCGATCATATTTACCTCGGGAGTCCAACGAATTGTGAACATGACCTTTCCATCAGTTTACATAAAGTATTTTCTAGTCCTGCCTTCATCAGTGTAAAACATTTATACCTTACTGATATTCCTACCTTGTCTGAAATTCCAGACAATATCTTCTTACTAAAGTCTTTAGAGTCTTTAATGCTAATGGATATTGCCATTACAAGCTTACCCGAAAACATTAAGTATCTCCCCCAACTCAATCAACTTAATGTTCGCGATTGTAAAAAGCTTCAATCTATTCCAGCGCTTTCACAGTTCATTCCATTTTTCATTGTCTTGAATTGTGAATCTCTTGAGAAAGTGTCGAGTTCAATGAGTGAAGCATGTATCAAACCCAATCCTTGTTTTACTGTGCTCATTAACTGCAAAAAATTGGATCTACATTCATATCAAACAGTTTTGGAAGATGCTATTGATGGGATTGAACTTGTAGCAAGACTAAAGCCAGCAAATGATGAAGATGATATTATTGGGTACTTGTTACCTGATATGCCTGGCAGAGAATATTGGTTCCATTACCGTTCTACACAAGTTTCTTTCACTCTCGAGCTTCCTCCTAATTTGTTGGGTTTTGCCTACTATTTCGTTCTTTCTCAGGGCCATATGAAAAAAAGTGTAAATTTTGGATGTGAGTGCTACTTGGAATATAGTTCAGGTGAAAGGATCTATATAACAAGTTTCACAAGATCCAACTCGTTCATTCATGAATTAAATTACAGTCCTTTACTCCACTTGATGTCAGATCATGTGGTTTTATGGTATGATCCAGTAAGTTGCAAGAAAATCAATGAAGAAATAAAAGCCATTAATGATGTGAACAACACCAGTTACAGTTCAAAGCTTGCATTTAGATTCTTTATTGATGAAAATTTACATGATGGAACTTTGGAGGATGAAGTAGCGATAAAAGAGTGTGGGTTTCGCTGGATATATAAAGAAGCAGCAGAGTTTTCCACAGTTTTTGAATCCCAAGAAGAAGAAGAAGAAGAAGAAGAAAGAATTCATCCAAGAAAGACATCTTTGAAACTCTTGAAATATTGGGCTCATTATTGA 3390 0.3614 MASSSSQDVTTVDLKNYDVFISFRGDDTRAGFTSHLYTALCGDHLHTYIDYRIQKGDEVWAELVKAIQDSTLFLVVFSENYATSTWCLNELVEIMECHKNGQIVVPVFYQVDPSHVRKQTGSYGSALAKHKKHGNNDDKMMQNWKNALFQVANLSGFHSTNYRTESALIEDITRVVLRKLNYNNTNDLTCNFISDENYWSIQALMKKIDSTEIQIIGLWGMGGIGKTTLAAAIFHKVSFQYEGSCFLENVTEVSKMHGINYTCNKLLSKLLKKDFDIDTSKVIPSMIIRRLKRMKSFIVLDDVNTLELLQNLIGVGQGWLGVGSTVIVTTRDKHVLISGGIEKIHQVKKMNSRNSLQLFRLNAFNKVLPKEVYEKLSERAIDYAKGNPLALIVLGSLLRDKSEIEWNCALAKLKEIPNGKIDKILRWSYNELDEKEKNIFLDIACILKGYKRDWVTKILNECGFFADIGIRHLVDKALIRVDSENYIQMHDLIQEVGKQIVREESPKNPGQRSRLCDPKEVCDVLKNNRGTEIVEAIFFDATEYANINLSPKAFENMVNLRLLVFRDHKEIKSVSLPHGLELLPENLRYFLWDGYPWKSLPPTFCAEMLVELSMQNSRVEKLWNGEMSLPNLETLNLTGSNKLIECPNVSGSPNLKLVTFNYCKSLPEVDSSIFFLQKLITLKVMGCTSLKSLSSNTCSPTLTELYAMECINLQEFSVTFTSFDRLRLGISEWGGNELPSSLLNKKNLDIFYFPIIECLVDLPENFADHIYLGSPTNCEHDLSISLHKVFSSPAFISVKHLYLTDIPTLSEIPDNIFLLKSLESLMLMDIAITSLPENIKYLPQLNQLNVRDCKKLQSIPALSQFIPFFIVLNCESLEKVSSSMSEACIKPNPCFTVLINCKKLDLHSYQTVLEDAIDGIELVARLKPANDEDDIIGYLLPDMPGREYWFHYRSTQVSFTLELPPNLLGFAYYFVLSQGHMKKSVNFGCECYLEYSSGERIYITSFTRSNSFIHELNYSPLLHLMSDHVVLWYDPVSCKKINEEIKAINDVNNTSYSSKLAFRFFIDENLHDGTLEDEVAIKECGFRWIYKEAAEFSTVFESQEEEEEEEERIHPRKTSLKLLKYWAHY* 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2376 1129 Gene3D - 14 177 IPR035897 -
Tpr5g2376 1129 Gene3D - 349 433 IPR042197 -
Tpr5g2376 1129 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 1067 IPR044974 GO:0006952
Tpr5g2376 1129 SUPERFAMILY "Winged helix" DNA-binding domain 420 526 IPR036390 -
Tpr5g2376 1129 Gene3D Ribonuclease Inhibitor 760 903 IPR032675 -
Tpr5g2376 1129 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 1067 - -
Tpr5g2376 1129 SUPERFAMILY L domain-like 540 907 - -
Tpr5g2376 1129 Pfam C-JID domain 949 1094 IPR045344 -
Tpr5g2376 1129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 443 IPR027417 -
Tpr5g2376 1129 PRINTS Disease resistance protein signature 215 230 - -
Tpr5g2376 1129 PRINTS Disease resistance protein signature 290 304 - -
Tpr5g2376 1129 PRINTS Disease resistance protein signature 384 398 - -
Tpr5g2376 1129 PRINTS Disease resistance protein signature 627 643 - -
Tpr5g2376 1129 Pfam NB-ARC domain 201 433 IPR002182 GO:0043531
Tpr5g2376 1129 ProSiteProfiles TIR domain profile. 15 180 IPR000157 GO:0007165
Tpr5g2376 1129 Pfam TIR domain 16 186 IPR000157 GO:0007165
Tpr5g2376 1129 Gene3D - 178 340 IPR027417 -
Tpr5g2376 1129 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 157 IPR035897 -
Tpr5g2376 1129 SMART till_3 16 154 IPR000157 GO:0007165
Tpr5g2376 1129 Gene3D Ribonuclease Inhibitor 520 728 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2376 Tpr-Chr5 45305898 45315599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2376 15 855 WRKY Transcription Factor Family AT4G12020 30.974 4.02e-95 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2376 - - mtr:MTR_8g018480 1561.97