Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2375 ATGGCTATGGCTTCTTCTTCAACTTCCTCTAATGCCTTTGATCTGAAAAAATATGATGTTTTCATCAGCTTTAGAGGCGATGACACTCGAGCTGGTTTCACAAGCCATCTTCATGCTGCCTTAAAGCGAAGCTATTTGGAGACTTACATAGACTACAGGATTGAAAAAGGAAACCAAGTTTGGGCAGAACTTGTGGAAGCAATCAAAGGTTCCACTCTATTTCTTGTTGTGTTCTCTGAAAACTATGCGTCTTCAACATGGTGTTTGAATGAACTCGTTGAAATAATGGAGTGCCACAAAAATGGACAAGTTGTTATTCCTGCGTTCTATCAAATTGACCCTTCACATGTTCGGAAGCAGACCGGAAGTTATGGCACTGCGATGGCAAAACACAATAAGCAAGGGAACAATGATGATAAGATGATGCAAATTTGGAAGAATGCTCTTTCTCAAGCTGCTAATTTATCGGGTTTTGATTCTACATCATACAGGACCGAATCTGACTTGATTGAAGACATTACTAAAGTTGTATTACAAAAGTTAAACCACAACTACACAAGTGAGCTTGCATGTAATTTCATATTGGATGATAACTATTGGAGCATTCAACCTTTAATAGAAAAAAATGATTCATCAAAAGTTCAAATAATTGGACTTTGGGGCATGGGGGGCATAGGCAAGACAACACTTGCTGCTGCTATTTTTCATAAAGTCTCTTTTCAGTATGAAGGCAGTTGCTTCTTAGACAATGTGAATGAAATTGCAAAAATTCATGGAATCAACTATACATGTAACAAACTTCTTTCCAAGTTACTAAGGGAAGATCTTCATATTGACACTTCTAAAGTAATACCACCCATAATCATTAGAAGACTCAAACGCATGAAATCTTTTATTGTATTAGATGATGTACATACTTTAGAGTTTCTACAAAACTTGATTGGAGTGGGATGTGGTTGGCTAGGAGCTGGTAGCACAGTCATTGTGACGACAAGGGATAAGCAGGTGCTGATAAGTGGAGGAATTCAAAAAATTCATGAAGTTAAGAAGATGAACTCCAGAAACTCTCTTCAACTTTTTAGCTTGAATGCTTTTGGCAAAACTTTACCTAAGGAGGGATTCGTGGAGCTCTCACATAGAGCAGTTGATTATGCTGACGGCAACCCTTTAGCACTGAAAGTATTAGGATCATTTCTTCGTTGCAAAAGTGAAATAGAATGGAAATGTGCACTAGCTAAACTGGAGGAAATTCCTAATGCAGAAATTGATAGGATATTGAGATGGAGTTATAATGAATTGGATGATAAAGAGAAAAATATATTTTTGGATATTGCATGCTTTTTCAAAGGACATGAGAGGGAAAAGATAACAAAAACATTAAATGAGTGTGGTTTTTTTGCAGATATAGGGATAAGACTTCTTTTAGACAAAGCTCTTATAAGACTTGACTTCAGAAATTGCATACAAATGCATGACTTAATACAAGAAATGGGAAAACAAATTGTTCGTGAAGAATGTCTTAAAAATCCCGGACAACGCAGTAGATTATTTGATCCCAAGGAGGTTTGTGGCGTGTTGAAAAATAATAGAGGAACTGAGATTGTTGAAGCCATATTTTTAGTTGCTAATCAATGTACAAATATAAATTTAAGTCCAAAAGCATTTGAAAAGATGGTAAATCTACGGTTACTTGCTATTCATGACCCAAAGGGATATGTAAGTCTTCCACATGGTCTCGACTTATTGCCAGAAAATTTGAGATATGTTTTGTGGGATGGATATCCATGGAAATCTCTTCCTCCAACCTTTCGTCCTGACATGCTTGTGGAGCTTTCCTTGAGAGAAAGCCATGTACAAAAACTTTGGAACGGAGTATTGAATTTGCCAAATTTAGAGATACTTGACCTTAGTCGCTCCAAACAGCTGATAGAATGTCCAAATGTGTCTGGTTTCCCGAATCTAAAAGAAGTAATAGTTGGTGATTGTGATAGCTTGCATGAAGTTGATTCATCAATTTTCCTTCTCCAAAAGCTTACAAGAATATTCATGGCTGGATGTACGTCACAAAAGAGCCTTTCGAGTACCACTTGCATCAATCTCCAAGAGTTCTCTGTCACATTTTCTTCCGTTGATAATTTGTTTCTGGCTTTATCAAAGTTTGGTGGGAATGAACTTCCATCATCAATATTGCAAACAAAAAATCTTAATTTGTTTATCTTTCCCATGATTGGATATCTTGTGAATCTTCCTGAAAACTTTGCTAAAAATATTTTCCTCATGAGTTCAGTGAATCGTGACAATGTCGACCCTTCCATCATCTTACATAAATTACTTTCTAGTCCTGCCTTCATGACTGTAACACACTTAAACTTGACCAATATTTCTCTCTTGTTTGAAATCCCAGACAATATCTTCTTACTATCATCATTAGAGACTTTAACACTAATTGGTCTGGCCATTAGAAGCTTGTCTGAAACCATCAAGTATCTTCCTCGACTCGCTGAGTTTGGTGTTTACGATTGTAAACTGCTTCAATCTATTCCGGCATTTTCACATTTCATTAAATCTTTAGTTGTCTGGAATTGTGAATCTCTTGAGAAACTGTCGAGTTCAATGGGTGAACCACATGAAAAAACAAATCCTGGTTTTACTATGCTCCTTAACTGCAATCAATTGGATCTACATTCATACAGAGCAGTTTTAAAAGATGCTCTTGGTGGAATTGATCTTAGAGCAAGACTAAGTTCACAATATGAAATCATGTATTTATTCAATGAATATTTTTTACCTGATATGCCTGGCAGAGAATTTTGGTTCCATTACCGTTCTACACAAGTTTCTTTCACTCTTGAGCTTCCTTCTAATTTATTTGGTTTTGCCTACTACTTGGTTATTTCCCAAGGCCGTGTGGAAAATGGCGCATATTTTCGATGTGAGTGCTATGTGGACGATAGTGTTACTATAACAAGTTTCACGAGAGTCAAAATCATAGAGCATCAATATTGGACTAATCTTGACAAATCAATTCACATGATGTCAGATCATTTAGTTTTATGGTATGATCCAGTAAGTTGCAAGCAGATAATGGATGAAATAAAAGCCATTAAGGATGTGAACAACAGTGGTTACAATCCAAAACTTACATTTAGATTCTTCATTGATCAAAGTGAAACTCTATATGATGAGGTATCGATAAAAGAGTGTGGATTTCGCTGGATATATCAAGAAAATATAGTTCCTCACACAATTTTTGAGTCCGATGATGAAGAAGAAGATATAATTCCTTACACAATTTTTGAGTCCAGTGATGAAGAAAAAGAAGAAGAAGAAATAGTTCCTCGCACAATTTTTGAGTCCCACGAAGAAAAAGAAGAAGAAGAAGAAACAATTCGTCCAAAAAAGAAATTATGTTGCAGGTTTTTTCATAAAAAAAAATAA 3438 0.3583 MAMASSSTSSNAFDLKKYDVFISFRGDDTRAGFTSHLHAALKRSYLETYIDYRIEKGNQVWAELVEAIKGSTLFLVVFSENYASSTWCLNELVEIMECHKNGQVVIPAFYQIDPSHVRKQTGSYGTAMAKHNKQGNNDDKMMQIWKNALSQAANLSGFDSTSYRTESDLIEDITKVVLQKLNHNYTSELACNFILDDNYWSIQPLIEKNDSSKVQIIGLWGMGGIGKTTLAAAIFHKVSFQYEGSCFLDNVNEIAKIHGINYTCNKLLSKLLREDLHIDTSKVIPPIIIRRLKRMKSFIVLDDVHTLEFLQNLIGVGCGWLGAGSTVIVTTRDKQVLISGGIQKIHEVKKMNSRNSLQLFSLNAFGKTLPKEGFVELSHRAVDYADGNPLALKVLGSFLRCKSEIEWKCALAKLEEIPNAEIDRILRWSYNELDDKEKNIFLDIACFFKGHEREKITKTLNECGFFADIGIRLLLDKALIRLDFRNCIQMHDLIQEMGKQIVREECLKNPGQRSRLFDPKEVCGVLKNNRGTEIVEAIFLVANQCTNINLSPKAFEKMVNLRLLAIHDPKGYVSLPHGLDLLPENLRYVLWDGYPWKSLPPTFRPDMLVELSLRESHVQKLWNGVLNLPNLEILDLSRSKQLIECPNVSGFPNLKEVIVGDCDSLHEVDSSIFLLQKLTRIFMAGCTSQKSLSSTTCINLQEFSVTFSSVDNLFLALSKFGGNELPSSILQTKNLNLFIFPMIGYLVNLPENFAKNIFLMSSVNRDNVDPSIILHKLLSSPAFMTVTHLNLTNISLLFEIPDNIFLLSSLETLTLIGLAIRSLSETIKYLPRLAEFGVYDCKLLQSIPAFSHFIKSLVVWNCESLEKLSSSMGEPHEKTNPGFTMLLNCNQLDLHSYRAVLKDALGGIDLRARLSSQYEIMYLFNEYFLPDMPGREFWFHYRSTQVSFTLELPSNLFGFAYYLVISQGRVENGAYFRCECYVDDSVTITSFTRVKIIEHQYWTNLDKSIHMMSDHLVLWYDPVSCKQIMDEIKAIKDVNNSGYNPKLTFRFFIDQSETLYDEVSIKECGFRWIYQENIVPHTIFESDDEEEDIIPYTIFESSDEEKEEEEIVPRTIFESHEEKEEEEETIRPKKKLCCRFFHKKK* 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2375 1145 Gene3D Ribonuclease Inhibitor 525 710 IPR032675 -
Tpr5g2375 1145 MobiDBLite consensus disorder prediction 1102 1128 - -
Tpr5g2375 1145 Pfam NB-ARC domain 205 432 IPR002182 GO:0043531
Tpr5g2375 1145 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 158 IPR035897 -
Tpr5g2375 1145 SMART till_3 17 155 IPR000157 GO:0007165
Tpr5g2375 1145 PRINTS Disease resistance protein signature 216 231 - -
Tpr5g2375 1145 PRINTS Disease resistance protein signature 291 305 - -
Tpr5g2375 1145 PRINTS Disease resistance protein signature 385 399 - -
Tpr5g2375 1145 PRINTS Disease resistance protein signature 626 642 - -
Tpr5g2375 1145 ProSiteProfiles TIR domain profile. 16 181 IPR000157 GO:0007165
Tpr5g2375 1145 SUPERFAMILY L domain-like 489 873 - -
Tpr5g2375 1145 Gene3D - 180 341 IPR027417 -
Tpr5g2375 1145 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 1069 IPR044974 GO:0006952
Tpr5g2375 1145 Gene3D Ribonuclease Inhibitor 760 888 IPR032675 -
Tpr5g2375 1145 Gene3D - 15 179 IPR035897 -
Tpr5g2375 1145 MobiDBLite consensus disorder prediction 1108 1128 - -
Tpr5g2375 1145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 444 IPR027417 -
Tpr5g2375 1145 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 12 1069 - -
Tpr5g2375 1145 Pfam TIR domain 17 188 IPR000157 GO:0007165
Tpr5g2375 1145 Gene3D - 350 434 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2375 Tpr-Chr5 45295121 45301346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2375 16 842 WRKY Transcription Factor Family AT4G12020 31.119 6.34e-87 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2375 - - mtr:MTR_8g018480 1485.32