Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2374 ATGGCTTCTTCATCCTCTGAAGCTGTGAGTACAGTAGATCTAAAAAAATATGATGTTTTCATTAGCTTTAGAGGTGATGACACTCGCTCCGGTTTCACAAGCCATCTTGACGCTGCGTTGAAGCGAAGCTATTTTGAGACATACATAGACTACAGAATTGAAAAAGGAGACCAAGTTTGGGCAGAACTTGAGAAAGCAATCAAAGATTCCACTCTGTTTCTTGTTGTGTTCTCGGAGAACTATGCGAATTCAACATGGTGTTTGAACGAAATCGTTGAAATAATGGAGTGTCACAAAAATGGACAAGTTGTTATTCCTGTTTTCTACCAAGTTGACCCTTCACATGTAAGGAAACAAACTGGGAGTTACGGCACTGCGTTTGCAAAACATGAGAAGCAAGACAACAATAATGATCATAAGATGATGCAAAATTGGAAGAATGCTCTTTTTCAAGCGGCTAATTTATCTGGTTTTCATTCTACCAAATACAGGACTGAATCTGACTTGATTGAGGATATTATCAGAGATGTATTAGAAAAGTTGAACCACAAGTACACAAATGATCTTACATGTAACTTCATATTAGATGAAAACTATTGGAGCATTCAGGATTTAATAAAAAAAATTGATTCAACAAAAGTTCAAATCATTGGACTTTGGGGCATGGGGGGCATAGGTAAGACAACACTTGCTGCTGCTATTTTTCACAAAGTCTCTTTTCGGTATGAAGGTAGTTGCTTCTTAGAAAATGTGACAGAAGTTTCAAAAACAAATGGAATTAACTATACATGCAACAGACTTCTTTCCAAGTTACTAAGGGAAAATGTTGATATTGACACTTCTAAAGTAATACCATCCATAATCATTAGAAGACTCAAACGCATGAAATCTTTGATTGTACTTGACAATGTGCATACTTCAGAACTTCTGCAAAACTTGATTGGAGTGGGAAGTGGTTGGCTAGGAGCTGGTAGCACAGTCATTGTGACGACAAGGGATAAGCAGGTGCTGATAAGTGGAGAAGTTGAAGAAATTCATCAAGTTAACAAGATGAACTCCCGAAATTCTCTCCAACTTTTTTGCTTGAATGCTTTTGGCAAATACTTACCTAAGGAGGGATATGTGGAGCTTGCAGAAAGAGCAATTGATCATGCCCAAGGCAACCCTTTAGCTTTGAAAGTGTTTGGATCATTTCTTCGTGGCAAAAGTGAAATAGAATGGAACTGTGCACTAGCTAAACTAAAGGAAATTCCCAATGGAAAAATTGATAGGATATTGAGATGGAGTTATGATGAATTGGATGATCAAGAGAAAAATACATTTCTAGACATTGCATGCTTTTTCAAAGGACATGAAAGGGATTGGGTAATAAAAATATTAAATGAGTGTGGTTTCTTTGCAAATATAGGGATAAGAACTCTTTTAGACAAGGCTCTTATAAGAGTTGACTTTGAAAATTGCATACAAATGCATGACTTGATACAAGAAATGGGAAAACAAATTGTTCGTGAAGAATCTCTTAAAAATCCCGAACAACGCAGTAGATTATGTGATCCTAAGGAAGTTGGTGACATGTTGAAAAATAATAGAGGAACTAAGATTGTTGAAGCCATATTTTTTAATGCTGATGAATATACAAATATAAATTTAAGCCCCAAAGCATTTAAAAAAATGGTAAACCTAAGGTTACTTGCTATTCAAGACCAAAAGGGATATGTAAGCCTTCCATATGGTCTTGACTTATTGTCAACAAATTTGAGATATTTTTCTTGGCATGGATATCCATTGAAGGCTCTATCTCCATCCTTTTGTCCTGAAATGCTTGTGGAGCTTTGTTTGATAGAAAGCCATGTACAAAAACTTTGGAATGGAGTCCTGCATTTGCCAAATTTAGAGAGACTTGACCTCACTCGCTCCAAAAAATTGATAGAGTGCCCAAATGTGTCTGGTTGCCCGAATCTAAAAGTTTTAATACTTAATAGTTGTTGTAGCTTGCCTGAAGTTGATTCATCAATTTTCCTTCTCCAAAAGCTTGAACGATTATGGATGGCTGGATGTACGTCACTAAAGAGCCTTTCCAGTAACACTTGTTCACCAGCCCTCACTGTATTAGATGTAGAGCGTTGCATCAATCTCCAAGAGTTCTCAGTCACATTTGCTTCCACTGATGGTTTGGTTTTGTTTTTACCAGATAGTTGGAATGGGAATGAACTTCCATCATCAATATTGAATAAAACAAATCTTGGAACCTTTCAATTTCCTTTGATTGAATGTCTTGTGGATCTTCCTGAAAACTTTGCCAATTGTATTTGCCTCCATAGTCCACCAAATCGTGAACTTGACCATTCCATCACCTTACATAAATTACTTTCTAGTCCTGCCTTCATCACTTTAAAATACTTAATCATTTCTGGTATCCCTATGTTGTCTGAAATCTCAGACAACATCTCCTTACTATCATCATTAGAGGATTTAGAACTACATGATATTGGCATTAGAAGCTTGCCCGAAACCATTAAGTATCTTCCCCGACTCTACCGGCTTTATGTTTGGTTTTGTAAAATGCTTCAATCTATTCCGATGCTTCCACTCAATCTAGTCAATTTCACTGTCTTTGATTGTGATTCTCTTGAGAAAGTGTTGAGTTCAATGGATGATCCATATGACAAACCCAATCCTAGTACTGTTATTCTCCGTAACTGCAAACAATTGGATCCGCATTCGTATCAGACAGTTTTGAACAATGCTATTGCTGCGATTGAACTTGGAGCAACTGGAGAAGATAATAGTAGCATTCAGTACCTGTTACCTGATATGCCTGGCAGAGACTATCGGTTCCATTACCGTTCTACACAAGTTCCAATCACTCTTGAGCTTCCTCCTAATTTGTTGGGTTTCGCCTATTACTTGGTTCTTTCTCAAGGTGAAGTGGGAGGAAGTGCACGTTTTGGATGTGAGTGCTACTTGGACAGTAGTTCAGTTGAAAGGATCTGTATAACAAGATTCCCTAGACCCGACATGTTCGAATATAGCATGTATTATTATGATAATGAGACTATAATCGACTTCGCGTCAGATCATGTGGTTTTATGGTATGATCCAGTATCTTGCAATCAGATAATGAAAGCAGTTGAAGAAATAAAAGCCATTAATGATGTGAACAGCACCAGTTACAATCCAAAGCTTACATTTAGATTCTTTATTGATGAAAATAAAACTCCATATGATGAAGTAGCAATAAAAGAGTGTGGGTTTAACTGGATATATAAAAAAGAAACAGTTCCTCCAACAAGGAAATTAAAGCAACATGTCTTTGGAACTCCAATGGCAAGCCTAGAATTAGATGAAACAAAAGGCTTGAGGTATTTACTTGAATAG 3378 0.3686 MASSSSEAVSTVDLKKYDVFISFRGDDTRSGFTSHLDAALKRSYFETYIDYRIEKGDQVWAELEKAIKDSTLFLVVFSENYANSTWCLNEIVEIMECHKNGQVVIPVFYQVDPSHVRKQTGSYGTAFAKHEKQDNNNDHKMMQNWKNALFQAANLSGFHSTKYRTESDLIEDIIRDVLEKLNHKYTNDLTCNFILDENYWSIQDLIKKIDSTKVQIIGLWGMGGIGKTTLAAAIFHKVSFRYEGSCFLENVTEVSKTNGINYTCNRLLSKLLRENVDIDTSKVIPSIIIRRLKRMKSLIVLDNVHTSELLQNLIGVGSGWLGAGSTVIVTTRDKQVLISGEVEEIHQVNKMNSRNSLQLFCLNAFGKYLPKEGYVELAERAIDHAQGNPLALKVFGSFLRGKSEIEWNCALAKLKEIPNGKIDRILRWSYDELDDQEKNTFLDIACFFKGHERDWVIKILNECGFFANIGIRTLLDKALIRVDFENCIQMHDLIQEMGKQIVREESLKNPEQRSRLCDPKEVGDMLKNNRGTKIVEAIFFNADEYTNINLSPKAFKKMVNLRLLAIQDQKGYVSLPYGLDLLSTNLRYFSWHGYPLKALSPSFCPEMLVELCLIESHVQKLWNGVLHLPNLERLDLTRSKKLIECPNVSGCPNLKVLILNSCCSLPEVDSSIFLLQKLERLWMAGCTSLKSLSSNTCSPALTVLDVERCINLQEFSVTFASTDGLVLFLPDSWNGNELPSSILNKTNLGTFQFPLIECLVDLPENFANCICLHSPPNRELDHSITLHKLLSSPAFITLKYLIISGIPMLSEISDNISLLSSLEDLELHDIGIRSLPETIKYLPRLYRLYVWFCKMLQSIPMLPLNLVNFTVFDCDSLEKVLSSMDDPYDKPNPSTVILRNCKQLDPHSYQTVLNNAIAAIELGATGEDNSSIQYLLPDMPGRDYRFHYRSTQVPITLELPPNLLGFAYYLVLSQGEVGGSARFGCECYLDSSSVERICITRFPRPDMFEYSMYYYDNETIIDFASDHVVLWYDPVSCNQIMKAVEEIKAINDVNSTSYNPKLTFRFFIDENKTPYDEVAIKECGFNWIYKKETVPPTRKLKQHVFGTPMASLELDETKGLRYLLE* 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2374 1125 Gene3D - 350 434 IPR042197 -
Tpr5g2374 1125 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 1006 IPR044974 GO:0006952
Tpr5g2374 1125 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 444 IPR027417 -
Tpr5g2374 1125 Pfam NB-ARC domain 202 432 IPR002182 GO:0043531
Tpr5g2374 1125 PRINTS Disease resistance protein signature 216 231 - -
Tpr5g2374 1125 PRINTS Disease resistance protein signature 291 305 - -
Tpr5g2374 1125 PRINTS Disease resistance protein signature 385 399 - -
Tpr5g2374 1125 PRINTS Disease resistance protein signature 626 642 - -
Tpr5g2374 1125 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 158 IPR035897 -
Tpr5g2374 1125 Gene3D - 179 345 IPR027417 -
Tpr5g2374 1125 SUPERFAMILY L domain-like 489 905 - -
Tpr5g2374 1125 SMART till_3 16 155 IPR000157 GO:0007165
Tpr5g2374 1125 Pfam TIR domain 16 188 IPR000157 GO:0007165
Tpr5g2374 1125 Gene3D Ribonuclease Inhibitor 729 916 IPR032675 -
Tpr5g2374 1125 Gene3D Ribonuclease Inhibitor 498 728 IPR032675 -
Tpr5g2374 1125 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 11 1006 - -
Tpr5g2374 1125 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Tpr5g2374 1125 Gene3D - 14 178 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2374 Tpr-Chr5 45275023 45287915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2374 15 848 WRKY Transcription Factor Family AT4G12020 30.389 4.15e-85 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2374 - - mtr:MTR_8g018480 1489.55