Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr5g2362 | ATGGGAAATATTGGTGATTCAAGAGCAATCATGGGATCTAAGGATAGCAATGACTCGATGGTGGCGATTCAGCTGACCGTTGATTTGAAACCTGATTTGCCAAGAGAAGCAGAAAGAATTAAGAAGTGCAAAGGTAGGGTATTTGCATTGGAAGATGAACCAGAAGTTCCTAGGGTGTGGTTACCTTATGATGATGCACCAGGATTAGCAATGGCTAGAGCATTCGGAGATTTTTGCTTGAAGGAGTATGGTGTCATTTCTATACCTGAATTTACGCACCGGCTTCTCACAGACAAAGACCAGTTCATTGTTCTTGCCTCGGACGGGATCTGGGATGTTTTGAGCAATGAAGAGGTGGTGGAGATAGTATCATCAGCACCGAATCGATCATCAGCAGCGAGGGTTATAGTGGAATCTGCCGCACGAGAGTGGAAACATAAATATCCGACTTCAAAAATGGACGACTGTGCTGTTTTGTGCCTATTTTTGGATGGGAAAATCAACTCAGAAGAATCTGATTGTGATGAACAATGCTATTCTTCCGCAACCATCCAGAATAACAACGATTTGAGTAATCCAGTTGAGTTGGACGAAGGTCAAAAGTCCGAGCCATCTTTGCGAAGGAACTACACTGTTAGATCCTCAGAAGAAATTGAGAAATGTGTAGGAGGAGAATCTGTTGATGTTGAAGATGGAACATCAACAGCTGAAGATCAAAACTGGTTAGCTCTAGAAGGTGTCACCCGAGTAAACTCACTGGTACAACTTCCTAGATTTTCTGAAGAAAAGCCTAACTCTTGA | 801 | 0.427 | MGNIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKKCKGRVFALEDEPEVPRVWLPYDDAPGLAMARAFGDFCLKEYGVISIPEFTHRLLTDKDQFIVLASDGIWDVLSNEEVVEIVSSAPNRSSAARVIVESAAREWKHKYPTSKMDDCAVLCLFLDGKINSEESDCDEQCYSSATIQNNNDLSNPVELDEGQKSEPSLRRNYTVRSSEEIEKCVGGESVDVEDGTSTAEDQNWLALEGVTRVNSLVQLPRFSEEKPNS* | 267 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr5g2362 | 266 | CDD | PP2Cc | 2 | 163 | IPR001932 | - | |
| Tpr5g2362 | 266 | SMART | PP2C_4 | 1 | 161 | IPR001932 | - | |
| Tpr5g2362 | 266 | Gene3D | - | 1 | 165 | IPR036457 | - | |
| Tpr5g2362 | 266 | Pfam | Protein phosphatase 2C | 2 | 140 | IPR001932 | - | |
| Tpr5g2362 | 266 | SUPERFAMILY | PP2C-like | 2 | 165 | IPR036457 | - | |
| Tpr5g2362 | 266 | PANTHER | PROTEIN PHOSPHATASE 2C 52-RELATED | 1 | 254 | - | - | |
| Tpr5g2362 | 266 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 163 | IPR001932 | - | |
| Tpr5g2362 | 266 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 254 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr5g2362 | Tpr-Chr5 | 45152718 | 45155671 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tpr5g2362 | 1 | 266 | PP2C-type Phosphatase Gene Family | AT1G03590 | 70.480 | 2.12e-128 | 370 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr5g2362 | - | - | gmx:100777448 | 451.825 |