Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2359 ATGGGATCTTGCCTCTCAGGAGCTTCTTCAGCTCCTTCTTCTCAAAATAACACTCATTATTATTATGAATCTCCATATAAATTTTATAACAACAATACACATGATTCGAATCCGGAATTGCGGTTGCATCGAATTCCTGAAAGAATATTTTTGAATGGTTCATCTCCTTATTCATCCTTGTTTTCTAAACAAGGTAGCAAAGGCATCAACCAGGATGCAATGCTTCTTTGGGAGAATTTTGGTTCCATGGATGACTGCGTATTTTGTGGTGTATTTGACGGACATGGACAATATGGACATGTGGTCGCAAAGAAAGTTAGAGATGCTTTTCCATTAAAGATAATGAATGAATGGAATTCACATCGCGGTGGAGATGGTAACAAGAATAACGACAACAATAATAATAAAAATTATAACCATTTCAAGATGATGAGAGAATCATTTGTGAAGGCATCTAAGTCTATGGATAGAGAACTCAAACAACAACATTCCATGGATTCTTATGGAAGTGGGACAACTGCTGTTAACTTGATCAAGAAGGGACAAGAACTAGTTATTGCAAATGTTGGAGATTCGAGAGCTGTTTTAGGTACCCGAGATCCAGATGGTTCTCTGATTGCACTTCAACTAACAACTGACCTAAAGCCGAATCTTCCAAGGGAAGCAGAGAGAATTATGATGTGTAAAGGAAGGGTGTTTGCCCTTGAGAACGAAGGAATTGCTCGACTTTGGCTTCCCAATGTTGATTCCCCGGGGCTAGCTATGGCACGTGCTTTTGGTGACTTTTGCCTCAAGGACTTTGGACTCATATCTATTCCAGAAGTCTCCTATCGCCGCCTCACTGACCAGGATCAGTTTGTAGTCTTAGCCACAGATGGGATTTGGGATGTTATGTCCAACGAACAAGTTGTGAACATCGTCGCATCTGCTCCACGATCTTCTGCTGCTAAACTACTTGTGGAGTCGGCTGTTCTAGCATGGAGGACAAAGCTTCCATCTTCGAAGCCCGATGATTGCTCTGCAATATGTCTCTTCTTTCATCCACAGGGAAATTCTTCACCTAACACTAATACTAGTATCGTTACGGGATCTAGAGAATCACCCTACAAGACTAAACAAAAGCACCAATAG 1131 0.4103 MGSCLSGASSAPSSQNNTHYYYESPYKFYNNNTHDSNPELRLHRIPERIFLNGSSPYSSLFSKQGSKGINQDAMLLWENFGSMDDCVFCGVFDGHGQYGHVVAKKVRDAFPLKIMNEWNSHRGGDGNKNNDNNNNKNYNHFKMMRESFVKASKSMDRELKQQHSMDSYGSGTTAVNLIKKGQELVIANVGDSRAVLGTRDPDGSLIALQLTTDLKPNLPREAERIMMCKGRVFALENEGIARLWLPNVDSPGLAMARAFGDFCLKDFGLISIPEVSYRRLTDQDQFVVLATDGIWDVMSNEQVVNIVASAPRSSAAKLLVESAVLAWRTKLPSSKPDDCSAICLFFHPQGNSSPNTNTSIVTGSRESPYKTKQKHQ* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2359 376 MobiDBLite consensus disorder prediction 355 376 - -
Tpr5g2359 376 CDD PP2Cc 57 346 IPR001932 -
Tpr5g2359 376 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 1 352 - -
Tpr5g2359 376 PANTHER ALPHABET, ISOFORM E-RELATED 1 352 - -
Tpr5g2359 376 Pfam Protein phosphatase 2C 70 314 IPR001932 -
Tpr5g2359 376 SUPERFAMILY PP2C-like 51 348 IPR036457 -
Tpr5g2359 376 Gene3D - 54 348 IPR036457 -
Tpr5g2359 376 ProSiteProfiles PPM-type phosphatase domain profile. 57 346 IPR001932 -
Tpr5g2359 376 SMART PP2C_4 47 344 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2359 Tpr-Chr5 45130690 45132779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2359 1 360 PP2C-type Phosphatase Gene Family AT3G02750 46.727 4.41e-125 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2359 - - cam:101504803 514.998