Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2353 ATGGAAGTTGATGGAAATGGAGAGCATGTTGTTGATGGGATTGAAGAGCAAGCTTTCAATGAAACTGCCGACAATTATTCATGTGCTGTTGAGGTTAATGATAAAGAACCATACACTGGAATGAAATTTGGTTCACAAGAAAATGCTCATTCATTTTACAGGGATTATGCTAAAGTTGTCGGGTTTGGAATATCAACTAAACATAGTCGTCGTTCAAAAGCTTCGAGACAGTTTATTGATGTGACTTATGCTTGCACAAGATATGGGAAGCAGCGGGAATCCATTGCACAAAATCCACGTCCTTGTTTGAAGGTGGAATGTGAGGCTAGCTTACGTATAAAAAGAAATTGTGATGGAAACTGGATTGTTCACAATTTCATTAAACATCATAACCATGAACTTTTTCCAGGATATGCACATTATTTTCCTTGTCACAGAGGAATCAATAAAGCTCAAAAGCATTGTATTGAAAATTGGCAACATGCTGGAGTGAGAACAAGCCAAATTTACGATGCAATGGCCAAACAACATGGAGGATATGAAAACATTGGTTGCTTGGAGAAAGATATCAGAAATCATTTAGATAAAGGTCGGCGCTTGGCTTTAGAATCAGGAGACGCAAATGCAATGTTGGAGTGTTTTATGCACATGCAAGAAGAAAACCCAAAATTCTTTTATGCAATAGATTTGGATGATGAGGATCGTATAAAAAATGTATTTTGGGTTGATGCAAAAGGTAGAGATGACTATCAAGAGTTTGGAGATGTGATTTCGTTTGATACCACATATATCACAAATAAGTACAAAATGCCATTTGCTCCTTTTATTGGTGTAAACAATCACTTTCAATCAAGGTTACTTGGTTGTGCATTACTCTCAGATGAGTCCACACATACTTTCACATGGTTGATGAAAACATGGCTCAGAGTAATGGGTGGAAAACCTCCGAATGCAATTATAACTGATCAAGATAGAGCAATGAAAGCATCTATTAAAGAGGTATTTCCTAATACTCGACATCGTTTTTGTCTTTGGCATATACTTCGTAAGGTGCCCGAGAAGCTTAGTCATGTATTGAGTAAACATGGAGACTTCATGATATATCTCAACATATGCATTTATAAGTCTTGGTCAAAACAACAATTTGAAGATTCATGGCATGAAATGGTAGAAAAATTTCAACTATCGAAAGATGTGTGGATTCACTCTTTATATGAAGAACGTGAACATTGGGTTCCTGTTTACATGAAGGATACTTTTTTTGGTGGCATGTCAACTACTCAGAGATCAGAGAGCATTAATTCATTTTTTGACAAATATGTATGTAAGAAAACTACATTACGGGAATTTGTTGAAAAATATAAGGTTGCTTTACAAGATAGAGAAGAGGCGGAAATGCAAGCTGATTTTAATACATGGCACAAACAACCTGTTCTTAGGACTCCATCACCTTTTGAGAAGCAAATGTCAATGATTTATACACATGAAGTCTTCAAAAAATTTCAAGTTGAAATTTTGGGATTATCTGGATGTCGTATTGTGAAAGAGCATAAAGATAATCAAGTTAACACTTTTAAAATCTTTGACTTTCAGAAAAATGAAGAGTTTATTGTAGAGTGTAATGTATCAAAAGAGGAAATATCATGCATATGTCACTTGTTTGAGTATAATGGATATCTTTGTAGACATTCATTAATGGCACTCCAAGCTGTTGGTGTATTTGCTGTCCCGCCACATTATATATTGAGAAGATGGACCAAAGATGTTAGAAGCAAGCATCACAAAAGGAAAAAGAAAGATAGGTCCTGA 1809 0.3543 MEVDGNGEHVVDGIEEQAFNETADNYSCAVEVNDKEPYTGMKFGSQENAHSFYRDYAKVVGFGISTKHSRRSKASRQFIDVTYACTRYGKQRESIAQNPRPCLKVECEASLRIKRNCDGNWIVHNFIKHHNHELFPGYAHYFPCHRGINKAQKHCIENWQHAGVRTSQIYDAMAKQHGGYENIGCLEKDIRNHLDKGRRLALESGDANAMLECFMHMQEENPKFFYAIDLDDEDRIKNVFWVDAKGRDDYQEFGDVISFDTTYITNKYKMPFAPFIGVNNHFQSRLLGCALLSDESTHTFTWLMKTWLRVMGGKPPNAIITDQDRAMKASIKEVFPNTRHRFCLWHILRKVPEKLSHVLSKHGDFMIYLNICIYKSWSKQQFEDSWHEMVEKFQLSKDVWIHSLYEEREHWVPVYMKDTFFGGMSTTQRSESINSFFDKYVCKKTTLREFVEKYKVALQDREEAEMQADFNTWHKQPVLRTPSPFEKQMSMIYTHEVFKKFQVEILGLSGCRIVKEHKDNQVNTFKIFDFQKNEEFIVECNVSKEEISCICHLFEYNGYLCRHSLMALQAVGVFAVPPHYILRRWTKDVRSKHHKRKKKDRS* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2353 602 Pfam SWIM zinc finger 540 571 IPR007527 GO:0008270
Tpr5g2353 602 SMART 26again6 547 574 IPR006564 GO:0008270
Tpr5g2353 602 Coils Coil 447 467 - -
Tpr5g2353 602 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 14 599 - -
Tpr5g2353 602 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 14 599 IPR031052 GO:0006355
Tpr5g2353 602 Pfam MULE transposase domain 256 349 IPR018289 -
Tpr5g2353 602 Pfam FAR1 DNA-binding domain 51 136 IPR004330 -
Tpr5g2353 602 ProSiteProfiles Zinc finger SWIM-type profile. 536 572 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2353 Tpr-Chr5 45051083 45053005 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g2353 MULE 5.1e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2353 - - dzi:111309578 830.476