Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g2351 | ATGGTACATCACTCTTGTTGCAACAAACAGAAGGTGAAAAGAGGATTATGGTCACCTGAAGAAGATGAAAAACTCATCAAATACATCACAACTTATGGACATGGTTGTTGGAGCTCAGTTCCAAAACTTGCTGGTCTTCAAAGATGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATCTAAGACCTGATTTGAAACGTGGAAGTTTTTCTCATCAAGAAGCTGCACTCATTATAGAACTCCATAGCATTCTAGGCAATAGATGGGCTCAGATTGCGAAGCACTTACCAGGAAGAACAGATAACGAGGTGAAAAACTTTTGGAATTCAAGCATAAAGAAAAAACTCTTTTCTCATGATTTTATTCCATCCTTCACCACATTTTCTAATATTCACACCCCCTACAATATTGGTTCTATGGATAGTTTCTTCCCTAATCCTAATGTGATACTAAATATCAATCATCACCATCAAGATCAGCTATATCTTCCAACCTCATCTCCAAATCAACAAGGCTTTCACCAAATTGATACAAAGGTAGACATCAATAATCAATATAAATCCAATTTCATTCACATTCAAAATCCAATTCAAGAAATAGTACAACCAATATCAAACCCTACACCTTATGAAGATACATGGTCATTGGATTGTGTAGCTCTTCATCTCAAGTCAAATCAAGAAAATCAAATTTCCAAAAGTGATACAACCCCACTTAATAGTGTTGACAAATTAATCAACCCAATTGAATTAATGCAACAATATGATCAATATCATGATGATCCTCACTTAGTTGAACTTGATCAACCAATTATGCCTAAATTAGTCAATGATCAAACCCTTGAGGATTATGTTTGTAGCATCCTAGATTCATCTAATTCCCAAGAACATGAGACTTCAACAAAAATTGAGTGCTACACATCTAGTATTGTTTATCCACAAGATCAAATTTTGGAAGCTAATCAATTGGATTACAATATTGATGCACTCATGTCATCATTGCCATCCACAAGTAGCCAAATTGTCACAAACCATATAATGACTTTAGGATGGGAGCCTTAA | 1062 | 0.3475 | MVHHSCCNKQKVKRGLWSPEEDEKLIKYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSHQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLFSHDFIPSFTTFSNIHTPYNIGSMDSFFPNPNVILNINHHHQDQLYLPTSSPNQQGFHQIDTKVDINNQYKSNFIHIQNPIQEIVQPISNPTPYEDTWSLDCVALHLKSNQENQISKSDTTPLNSVDKLINPIELMQQYDQYHDDPHLVELDQPIMPKLVNDQTLEDYVCSILDSSNSQEHETSTKIECYTSSIVYPQDQILEANQLDYNIDALMSSLPSTSSQIVTNHIMTLGWEP* | 354 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g2351 | 353 | Gene3D | - | 69 | 116 | - | - | |
Tpr5g2351 | 353 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 66 | 116 | IPR017930 | - | |
Tpr5g2351 | 353 | CDD | SANT | 17 | 61 | IPR001005 | - | |
Tpr5g2351 | 353 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 65 | IPR017930 | - | |
Tpr5g2351 | 353 | SMART | sant | 66 | 114 | IPR001005 | - | |
Tpr5g2351 | 353 | SMART | sant | 13 | 63 | IPR001005 | - | |
Tpr5g2351 | 353 | Pfam | Myb-like DNA-binding domain | 67 | 109 | IPR001005 | - | |
Tpr5g2351 | 353 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
Tpr5g2351 | 353 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
Tpr5g2351 | 353 | SUPERFAMILY | Homeodomain-like | 11 | 108 | IPR009057 | - | |
Tpr5g2351 | 353 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Tpr5g2351 | 353 | PANTHER | MYB DOMAIN PROTEIN 55 | 1 | 340 | - | - | |
Tpr5g2351 | 353 | CDD | SANT | 69 | 109 | IPR001005 | - | |
Tpr5g2351 | 353 | Gene3D | - | 11 | 67 | - | - | |
Tpr5g2351 | 353 | PANTHER | TRANSCRIPTION FACTOR MYB26 | 1 | 340 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g2351 | Tpr-Chr5 | 45027216 | 45029591 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr5g2351 | 1 | 118 | MYB Transcription Factor Family | AT3G13890 | 94.068 | 6.19e-78 | 241 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Tpr5g2351 | Myb_DNA-binding | 6.9e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g2351 | K09422 | - | gmx:100785147 | 462.611 |