Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2349 ATGGGTGGTTCAGGAAGCTGGTTTAAATCACTTATTCCACCAAAAAAGCCCTCCAACAATAATCAAGCGAAGGGTATTGATAAAAGTAAGAGAAAATGGAAGTTATGGAGGAATTCTTCAGAAAGTATTGGATTTGGAACTTCTATGAAGAAGGGACATGGTTTTGTTGCTTATGATAAATATTCATGTTCTTCATTTGTAGTGAATGAACAAGCTTTTGCTGCTGCAATGGCTGCTGTAGTAAGAACTCCACACAAAGACTTCTTGTTGATTAAGCAGGAATGGTCTGCCATCCGTATCCAGTCTACTTTTCGAGGCTTCTTGGCAAGAAGAGCTTTGAGGGCTCTGAGGGCATTGGTGAGGCTGCAAGCTATATTTCGTGGCCGGTTAGTGAGGAAACAAGCTGCTGTTACTCTACGGTGCATGCAGGCTCTAGTGCGAGTTCAAGAACGCGTCAAGGCAAAGAATGTTAGGAATTCTCCAGAAAGGAAAGCTAAGAAGAAGCTATTAAATGAGCAGCACAATCAAGATGATTCAGTTAAACAAGCCGAGAAAGGTTGGTGTGACATACCAGGAACTGTGGAAGAGGTTAAAGCAAAACTTAAAATGAGGCAAGAAGGAGCAATTAGGCGAGATAGAACGATGTCATACTCCATTTCCACTCAGACATCAACGGTGAGTTCTAGTCCAACCTCAAGAGCTTCTAAGTCATCGACTCCTCTCAAGAACCGCAGCTTAGACAGTAAGATCTTGTTAGAACGCTGGATTGCGGCTAAGCCATGGGAGAGCAGGTTGATGGGAGACATTTACTTGGACTCACCTGACATGACTCCATTGTCCAAGAAGAGTGAGAATGTTGAACTCTCTTTTAACTCATATCAACAAAATGGCTTAAAATCAAGAAGGAATGGTGCAACAACTAGAAGTTCATCTAAATCTCTTACGACAAGCCAATCAACTCCGTCGTCTTCAGCTGTAAGCTCTGAATGTATGTATGATGATAGCCCTTTATCAACTTCATGCACATCAGAGTCACCAGCCAAGGTGGAAGATACAAAGGAAAGGAAAATTGGGAAACCGAGCTACAGAAGTTTGATGGCGTCAACCAAAGCTAAACTGAAAGTGAGTAGATCACATTCGTCTCCGAATTTGAAGAAACTCTTTATGGATGATGATTATCTATCTCATAGCACGAGAAAAAACATTCTAAGCGCAGATACTAGAAGCATCTCTGGTTCATATTCTTCGGCTAATATATGGAAGGATCTTTATGGTACGCCTTTAAGGACAAGTTATCAAAAGCAATTTACATTGGGAGATAAGTAG 1326 0.4133 MGGSGSWFKSLIPPKKPSNNNQAKGIDKSKRKWKLWRNSSESIGFGTSMKKGHGFVAYDKYSCSSFVVNEQAFAAAMAAVVRTPHKDFLLIKQEWSAIRIQSTFRGFLARRALRALRALVRLQAIFRGRLVRKQAAVTLRCMQALVRVQERVKAKNVRNSPERKAKKKLLNEQHNQDDSVKQAEKGWCDIPGTVEEVKAKLKMRQEGAIRRDRTMSYSISTQTSTVSSSPTSRASKSSTPLKNRSLDSKILLERWIAAKPWESRLMGDIYLDSPDMTPLSKKSENVELSFNSYQQNGLKSRRNGATTRSSSKSLTTSQSTPSSSAVSSECMYDDSPLSTSCTSESPAKVEDTKERKIGKPSYRSLMASTKAKLKVSRSHSSPNLKKLFMDDDYLSHSTRKNILSADTRSISGSYSSANIWKDLYGTPLRTSYQKQFTLGDK* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2349 441 MobiDBLite consensus disorder prediction 156 184 - -
Tpr5g2349 441 SMART iq_5 115 136 IPR000048 GO:0005515
Tpr5g2349 441 SMART iq_5 92 114 IPR000048 GO:0005515
Tpr5g2349 441 MobiDBLite consensus disorder prediction 1 30 - -
Tpr5g2349 441 MobiDBLite consensus disorder prediction 214 243 - -
Tpr5g2349 441 Pfam IQ calmodulin-binding motif 117 134 IPR000048 GO:0005515
Tpr5g2349 441 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Tpr5g2349 441 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 439 - -
Tpr5g2349 441 MobiDBLite consensus disorder prediction 293 346 - -
Tpr5g2349 441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 135 IPR027417 -
Tpr5g2349 441 Gene3D - 91 145 - -
Tpr5g2349 441 MobiDBLite consensus disorder prediction 293 357 - -
Tpr5g2349 441 MobiDBLite consensus disorder prediction 212 243 - -
Tpr5g2349 441 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Tpr5g2349 441 PANTHER IQ-DOMAIN 5-RELATED 1 439 - -
Tpr5g2349 441 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2349 Tpr-Chr5 45002833 45006552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2349 1 424 IQD Protein Family AT1G72670 43.478 4.44e-82 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2349 - - gmx:100784093 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4820 7 56233194 56236153 Tpr5g2349 5 45002833 45006552 PCT