Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2343 ATGGCGCATGGAAGGATAAGGGCAAGGCTCCGAAGGAGCCATTTTTATACATTTGGTTGTCTTCGACCTACTACCACTGACGAGGGGCCTCATCCACTTCAAGGTCCTGGGTTCTCGCGAACTGTGCACTGTAACCAACCTGAGATCCATGAGAGGAGACCTTTATATTACTGCAAGAATGATATTTCCACAACTAAATATAATGTGCTTACATTTTTTCCCAAGGCACTTTTTGAACAGTTTCGTAGAGTTGCTAATATATACTTTCTTTTGGCTGCGTGTCTCTCAGCCTCGCCAATTTCACCTTTTAGTCCTCTGAGTATGATTGCTCCTTTGGCATTTGTTGTTGGGCTTAGTATGGCAAAGGAAGCATTGGAAGATTCACGCAGGTTCGTTCAGGATGTTAAAGTTAACCATCGAAAAGTTCATCATCATAAAGGTGATGGTGTTTTTGGTCCCAGGATGTGGCAGAACATTATGGTTGGGGATGTAGTAAAAGTAGAAAAGGACAAGTTTTTTCCAGCTGATTTGTTGCTCTTGTCATCAAGTTATGAGGACGGGATATGCTATGTGGAGACAATGAATTTAGATGGTGAGACCAACTTAAAGGTAAAAAGATCTTTGGAGTCTACCTTGTTCCTAGATAGCGATGAAGCGTTTAAGGATTTCGCTGGAACAATAAGATGTGAAGACCCAAACCCCAATCTTTACACTTTTGTTGGAAACTTTGAGCATGAGCGCCAAGTTTATCCTCTTGATCCTAGTCAAATTCTCCTTCGAGATTCTAAGCTCAGGAACACGGAATACATCTATGGAGTGGTCATTTTCACTGGCCACGACAGTAAAGTCATGCAGAATTCCACAAGATCCCCTTCAAAGAGGAGCACGATAGAAGAGAAGATGGACTATATCATATACACTCTCTTCACTGTCCTTATCTTTATATCTATCATTAGTTCCATAGGATTCATTGTCAAGACTAAGTACCAAACCCCTACGTGGTGGTACTTACGCCCCGACAGTATCGAATCCCAGTATGATCCCCAGAAAATTGGAGTGGCTGGGTTGAGTCATTTGGTTACTGCTCTCATTCTCTATGGATATTTGATACCCATCTCACTTTATGTTTCCATTGAGGTTGTGAAGGTTTTACAAGCAACCTTCATTAACCAAGACATTCATATGTATGATGAAGAAACCGGAACTCCAGCTGACGCACGGACTTCAAATTTGAATGAAGAGTTGGGTCAGGTGGATACAATTCTCTCTGATAAAACTGGAACTTTAACCTGCAATCAGATGGACTTTTTGAAGTGCTCTATTGCGGGTACTCCATATGGTGTGTGTTCTAGTGAAGTTGAAGTTGCTGCAGCGAAGCAGATAGCTTCTGATCTTGAGGACGATGATTCAGATCTCTCCAATTTCCCATTGCCTAATAAGAAAGGACATGTTTCATGGGAAAATGTTGGAGTAGCTGAAGAATATGAACTAGAGACTGTTGTTACTTCCAAAGGTGATGAGGATGAAAAGCATGCCATAAAGGGATTTGGTTTTGAAGACGACCGTCTCATGAATGGTAATTGGTTGCAAGAGCCCAATACCGATGACATTTTATTATTTTTCCGAATACTTGCTGTTTGCCATACTGCCATTCCTGAGTTGAATGAGGAAACGGGCAGTTTTACATATGAAGCAGAGTCTCCAGATGAAGGGGCTTTTCTAGTAGCAGCAAGAGAATTTGGCTTTGAGTTTTGTAGGAGGACTCAGTCAAGTATTTTCACACGTGAAAGAATTTCTACTTCAGGGAAAGTGGTTGAAAGGGAGTACAAACTCTTAAATCTACTAGATTTCACAAGTAAAAGAAAGCGTATGTCAGTGATTGTCCGTGATGAGGAGGGCCAACTTTTTCTTCTGTGCAAAGGGGCTGACAGTATCATATTTGATCGTTTGTCCAAGAATGGAAAAATTTATTTGGAGGCTACTACCATGCATTTAAATGATTATGGAGAAGCAGGTTTGCGAACACTAGCTCTGGCCTATAGAAGGCTTGAAGAAAAAGAGTACTCAGATTGGAACGACGAGTTTCAGAAAGCCAAAGCAGCTGTTGGGGCTGATAGAGATGCAATGCTTGAGCGGGTATCAGAGATGATGGAAAAAGAGTTGATTCTTGTTGGGGCTACTGCTATAGAAGACAAACTGCAGAAAGGGGTTCCTGATTGCATTGATAAACTTGCTCAAGCTGGTCTCAAGATTTGGGTATTGACGGGGGATAAGATGGAAACTGCAATCAACATTGGATTTTCCTGCAGTTTGCTTCGACAGGGCATGAAGCAGATCTGTATAACTACAAATTCAGACACAGAATCCAATGATGTCAAACAGGCCATCAAGGACAACATATTAAATCAAATCACCAATGCTACACAAATGATAAAGCTGGAGAAGGACCCTCATGCTGCATTTGCATTAATTATTGATGGGAAAACTCTGACATACACTTTAGAAGATGACCTGAAGCACAAATTTTTGGGTCTGGCAGTTGATTGTGCATCTGTCATCTGCTGTCGTGTGTCTCCCAAGCAAAAGGCACTGGTCACAAGGTTGGTAAAAGAAGGAACTGGGAAGACCACTCTCGCAATAGGTGATGGTGCAAATGATGTTGGTATGATACAAGAAGCAGATATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTCTCAATTGCCCAATTTCGATTTTTGGAGCGGCTTCTGGTGGTGCATGGACACTGGTGTTACAAGAGAATTGCACAGATGATATGCTATTTCTTCTACAAGAATATAGCATTTGGCCTCACCATATTCTATTTTGAGGCCTTTACAGGCTTCTCTGGCCAATCGGTATATGATGACTGGTACATGATATTGTTCAATGTTTGTCTGACATCATTACCCGTCATTTCACTTGGTGTTTTTGAACAAGATGTTCCGTCGGACGTTTGTCTACAGTTTCCTGCACTGTACCAACAAGGACCCAAAAATTTGTTCTTTGATTGGTATAGAATATTGGGATGGATGGCCAATGGTTTATATTCCTCCATCGTTATCTTCTTACTCACCGTCACCATATTATATGATCATCCATTCCGTGAAGATGGCCAGACAGCTGACATGGCTGCTGTTGGAACCACAATGTTCACTTGCATCATCTGGGCTGTGAACGTCCAAATTGCGCTGACAATGAGCCATTTTACCTGGATTCAACATCTGTTTATATGGGGTAGCATAATGACTTGGTACGTCTTTCTCACGATATATGGCATGCTTTCTCCCGAGTATTCTAAGAATGCCTACCATTTACTGGTTGAAGCCCTCGGACCTGCACCTATTTATTGGTCAACAACACTTTTAGTTACAGTTACATGCAATCTTCCTTATCTTATCCACATATCATTACAAAGATGTTTTAATCCCATGGATCACCACATTATCCAAGAAATCAAGCACTACAAGAAAGATATTGAGGATCAACACATGTGGATAAGGGAGAGTTCTAAAGCCAGACAAGAAACCAAGATTGGATTCACTGCAAGAGTGGAAGCAAAGATCAGACAATTGAAGGGCAAGCTGCAGAGAAAACATTCTTTCTTGACTATTATGTCCCCAGTACATAAGTAA 3678 0.4144 MAHGRIRARLRRSHFYTFGCLRPTTTDEGPHPLQGPGFSRTVHCNQPEIHERRPLYYCKNDISTTKYNVLTFFPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFVQDVKVNHRKVHHHKGDGVFGPRMWQNIMVGDVVKVEKDKFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLESTLFLDSDEAFKDFAGTIRCEDPNPNLYTFVGNFEHERQVYPLDPSQILLRDSKLRNTEYIYGVVIFTGHDSKVMQNSTRSPSKRSTIEEKMDYIIYTLFTVLIFISIISSIGFIVKTKYQTPTWWYLRPDSIESQYDPQKIGVAGLSHLVTALILYGYLIPISLYVSIEVVKVLQATFINQDIHMYDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTPYGVCSSEVEVAAAKQIASDLEDDDSDLSNFPLPNKKGHVSWENVGVAEEYELETVVTSKGDEDEKHAIKGFGFEDDRLMNGNWLQEPNTDDILLFFRILAVCHTAIPELNEETGSFTYEAESPDEGAFLVAAREFGFEFCRRTQSSIFTRERISTSGKVVEREYKLLNLLDFTSKRKRMSVIVRDEEGQLFLLCKGADSIIFDRLSKNGKIYLEATTMHLNDYGEAGLRTLALAYRRLEEKEYSDWNDEFQKAKAAVGADRDAMLERVSEMMEKELILVGATAIEDKLQKGVPDCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQICITTNSDTESNDVKQAIKDNILNQITNATQMIKLEKDPHAAFALIIDGKTLTYTLEDDLKHKFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFTGFSGQSVYDDWYMILFNVCLTSLPVISLGVFEQDVPSDVCLQFPALYQQGPKNLFFDWYRILGWMANGLYSSIVIFLLTVTILYDHPFREDGQTADMAAVGTTMFTCIIWAVNVQIALTMSHFTWIQHLFIWGSIMTWYVFLTIYGMLSPEYSKNAYHLLVEALGPAPIYWSTTLLVTVTCNLPYLIHISLQRCFNPMDHHIIQEIKHYKKDIEDQHMWIRESSKARQETKIGFTARVEAKIRQLKGKLQRKHSFLTIMSPVHK* 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2343 1225 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Tpr5g2343 1225 PRINTS P-type cation-transporting ATPase superfamily signature 880 899 - -
Tpr5g2343 1225 Gene3D - 114 288 - -
Tpr5g2343 1225 Gene3D - 720 920 IPR023214 -
Tpr5g2343 1225 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 518 687 IPR023299 GO:0000166
Tpr5g2343 1225 CDD P-type_ATPase_APLT_Dnf-like 60 1040 - -
Tpr5g2343 1225 SFLD p-type atpase 405 931 IPR044492 -
Tpr5g2343 1225 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Tpr5g2343 1225 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1221 - -
Tpr5g2343 1225 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1166 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Tpr5g2343 1225 Gene3D - 419 431 IPR023214 -
Tpr5g2343 1225 SUPERFAMILY Calcium ATPase, transmembrane domain M 51 1152 IPR023298 -
Tpr5g2343 1225 SFLD Haloacid Dehalogenase 405 931 - -
Tpr5g2343 1225 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1221 - -
Tpr5g2343 1225 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Tpr5g2343 1225 Pfam Phospholipid-translocating P-type ATPase C-terminal 908 1158 IPR032630 -
Tpr5g2343 1225 SUPERFAMILY HAD-like 410 924 IPR036412 -
Tpr5g2343 1225 Gene3D - 593 698 IPR023299 GO:0000166
Tpr5g2343 1225 SUPERFAMILY Calcium ATPase, transduction domain A 146 286 IPR008250 -
Tpr5g2343 1225 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 852 961 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr5g2343 1225 Pfam Cation transport ATPase (P-type) 546 651 - -
Tpr5g2343 1225 Gene3D - 432 454 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2343 Tpr-Chr5 44923105 44930019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2343 1 1221 Primary Pumps ATPases AT1G17500 74.428 0.0 1913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2343 K01530 - gmx:100784621 2152.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4817 7 56164373 56171472 Tpr5g2343 5 44923105 44930019 PCT