Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2312 ATGGCGCATAACGAATCAAATTCCGATCAAAATTCCCAAACCCGATTCTATAATCCATACAAAGACCTCGAAGTTCCTATCTCTCGAAATCTCTACAAACTCCCAACCTCTCCAGAGTTTCTCTTCGAGGAAGAATTACACCGTAACCACCGTTCTTGGGGCGAAAATCTCACCTTCTACACTGGATGCAGTTACCTCGCCGGTTCAATCGCCGGCGCCGGAGTCGGACTCGTTGATGGTGTTCGATCTTTTGAGTCGAGCGACACCATGAAGCTTCGGGCTAATCGGATTCTTAACGCCTCGGGACATGCGGGTCGGACATGGGGAAACCGTGCTGGGATCATTGGGTTGCTTTACGCTGGAGTTGAGAGTGGGATGGAAGCTGTGAGGGATACTGATGATGTCTGGAATAGTGTTGCGGCGGGGCTTGGGACCGGGGCGCTTTATCGAGCAGCAAGAGGGGTGAGATCGGCTGCGGTGGCTGGTGCTGTTGGGGGTGTTCTTGTTGGAGCTGCTGTGACTGCTAAGCAGGTGTTGAAAAGATATGTTCCTATATGA 558 0.5161 MAHNESNSDQNSQTRFYNPYKDLEVPISRNLYKLPTSPEFLFEEELHRNHRSWGENLTFYTGCSYLAGSIAGAGVGLVDGVRSFESSDTMKLRANRILNASGHAGRTWGNRAGIIGLLYAGVESGMEAVRDTDDVWNSVAAGLGTGALYRAARGVRSAAVAGAVGGVLVGAAVTAKQVLKRYVPI* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2312 185 Pfam Tim17/Tim22/Tim23/Pmp24 family 59 168 - -
Tpr5g2312 185 PANTHER TIM23 1 185 IPR045238 GO:0022857
Tpr5g2312 185 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2312 Tpr-Chr5 44311254 44312312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2312 2 185 Chloroplast and Mitochondria Gene Families AT1G72750 67.742 2.12e-80 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2312 K17794 - gmx:100813158 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g4808 7 56097101 56098190 Tpr5g2312 5 44311254 44312312 PCT