Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2308 ATGAACAATCTGTATTATAATTTTTTGAATTTGGTTTGTGTAGGTGATCATGAAGATGTTCCAAAACATGGTCGTCCACCAACACAAGAAGAATTGCATCAATTCTTTCTTCCCTTTCGTGGTTTTTGTGCTAGAAAAGGGATTGAAGCAAAAGAATTGGTTTTACATGACATTGATGTTCCTAGTGCACTTACTGATTATGTTGTTGACAACTCTATCAACAATGTTATTGTTGGTGGTTGTGCTTCCCCTTGGAGTGCTTTTATAAGGAGATTTAAAGAAGTAAATGTTGCATCTTCCTTAGCTAAATCTTTACCAGAGTCATGTACATTACATGTTATATCAAAAGGAAAAGTACAAAAAATTCGACCAACAGGGCCTCCTATTCCTGAACATGATGAAACTAGTACTCAACCTCAAAATATTGAAGTCACGCCAACTAGATCTTTAAAAGACATAGTTACACTATTGCAAAATGTAAATAAGTTTCTTGGCCATACGCCTGATTCTGATGATATAAGCAGGAGTTCATCGATAGAAGATGCAAACAAATTTTGGGAATCATTACATGATATGAAAGATGTTATACCATTGACACCACATATATCCAATATTGTTGAAGATAACTATTCACCAAGAGGACCAAGATTTTCAATAGGAAGCACCTCATCACAAACTTCATCAAATAGAAGTTCTTCTCCCAATAGTAATGATAGTTTAGGGAAAATAAGCAATAATAATGATGTCAATTGCCCATTTTCTCCAAAACCACCGGTAAGCATCGAGACAGAAATAATGAAATTAAAACTAGAATTGAAGAAAGCATCGGAGCAATATGGTATAGTGTGCAGAGAAGCTGTTTTAGCAAAACAGAAGGCAAATGAGCTTGAAAAGTTTAGACAAGAGAAAGAACGAAATGTTGAAAAAGCCAGGCTTGCTGAAGAGGCTGCATTGGCTTTAGCAGAAGTAGAGAGACAAAAAGCGAAGGCAGCTATAGAATCCGCCGAAATGTCGCAACGTCTAGCAGAAATGGAAACTCAAAAGAGAAAACTAGCTGAATTAAAAGCTAAGCACGATGAACAATTTAGGAAAAGGACAATACATGATGTTGTGTTTCATAACATTGCGTATAGAAGATACAGTATTAAAGAAATTGAAGTTGCAACCAATGGTTTTGACAATGCTCTCAAAATTGGTGAAGGAGGGTATGGACCTGTTTTTAAAACTGTACTTGATCACACTGTTGTTGCCATAAAGGTTCTTAGACCTGATTTAGCCCATGGAGAGAGGCAATTTCAACAGGAGGTTCTTGTTTTGAGCACCATAAGACATCCCAACATGGTGCTCCTTCTAGGTGCATGCCCAGAGTTTGGATGTCTTGTGTACGAACACATGGAAAATGGAAGTTTAGAAGATCGCTTATTCCGAAAAGGCAATAGTCCACCAATTCCATGGAAAAATCGTTTCAAAATAGCATATGAAATTGCGACTGGCCTTCTTTTCCTTCACCAAAGAAAGCCTGAACCACTAGTACACCGTGATATGAAACCAGGAAACATTCTCTTAGACAAAAATTATGTTAGCAAGATTAGTGACGTTGGTTTGGCACGACTCGTTCCAGCTTCAGTAGCTAACAAAACCACTCAATATCGCATGACAGGTGCTGCTGGAACATTTTGTTACATTGATCCTGAGTATCAGCAAACTGGGATGTTGGGTGTAAAATCAGATATATATTCATTAGGCGTAGTGTTACTACAAATTATTACTGCAAAGCCTCCAATGGGTTTGTCACATTTGGTTGAAGAGGCTATCCAAAAAGGAGACTTCATAGATGTGCTTGATTCAAGTGTGCCAGATTGTCCTATTGAAGAGACTTTATCATTTGCTAAGTTGGCCTTAAAGTGTTGTGAGTTGAGAAAACGTGATAGACCTGATCTTGGTACTGTCATTTTGCCAGAGTTGAATAGAATATCACAAATTCTAGAATGTGATGAAGATTGA 2004 0.3723 MNNLYYNFLNLVCVGDHEDVPKHGRPPTQEELHQFFLPFRGFCARKGIEAKELVLHDIDVPSALTDYVVDNSINNVIVGGCASPWSAFIRRFKEVNVASSLAKSLPESCTLHVISKGKVQKIRPTGPPIPEHDETSTQPQNIEVTPTRSLKDIVTLLQNVNKFLGHTPDSDDISRSSSIEDANKFWESLHDMKDVIPLTPHISNIVEDNYSPRGPRFSIGSTSSQTSSNRSSSPNSNDSLGKISNNNDVNCPFSPKPPVSIETEIMKLKLELKKASEQYGIVCREAVLAKQKANELEKFRQEKERNVEKARLAEEAALALAEVERQKAKAAIESAEMSQRLAEMETQKRKLAELKAKHDEQFRKRTIHDVVFHNIAYRRYSIKEIEVATNGFDNALKIGEGGYGPVFKTVLDHTVVAIKVLRPDLAHGERQFQQEVLVLSTIRHPNMVLLLGACPEFGCLVYEHMENGSLEDRLFRKGNSPPIPWKNRFKIAYEIATGLLFLHQRKPEPLVHRDMKPGNILLDKNYVSKISDVGLARLVPASVANKTTQYRMTGAAGTFCYIDPEYQQTGMLGVKSDIYSLGVVLLQIITAKPPMGLSHLVEEAIQKGDFIDVLDSSVPDCPIEETLSFAKLALKCCELRKRDRPDLGTVILPELNRISQILECDED* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2308 667 Gene3D Phosphorylase Kinase; domain 1 371 464 - -
Tpr5g2308 667 SMART serkin_6 392 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2308 667 Gene3D Transferase(Phosphotransferase) domain 1 465 665 - -
Tpr5g2308 667 ProSiteProfiles Protein kinase domain profile. 392 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2308 667 MobiDBLite consensus disorder prediction 219 253 - -
Tpr5g2308 667 PANTHER OS02G0152300 PROTEIN 17 661 - -
Tpr5g2308 667 CDD STK_N 29 117 - -
Tpr5g2308 667 SUPERFAMILY Protein kinase-like (PK-like) 370 650 IPR011009 -
Tpr5g2308 667 Pfam Protein kinase domain 396 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2308 667 MobiDBLite consensus disorder prediction 120 139 - -
Tpr5g2308 667 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 17 661 - -
Tpr5g2308 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
Tpr5g2308 667 Coils Coil 286 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2308 Tpr-Chr5 44264467 44268238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2308 29 667 Receptor kinase-like Gene Family AT1G17540 48.000 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tpr5g2308 Pkinase 7.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2308 - - gmx:100799611 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2308 5 44264467 44268238 Tpr5g2308 5 44264467 44268238 ECH
Tpr5g2308 5 44264467 44268238 Tpr7g4807 7 56092965 56095970 PCT