Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2298 ATGGACATGAGTAATGTGGATGAGGAAGAATCAGAGGAAGAGATTCATGTTCCAGCTGAAATTGATTGGCAAATGCTTGATAAATCGAAGTTTTTCTTCCTTGGTGCTGCTTTGTTTTCTGGTGTTTCAGCAACATTGTATCCTGTTGTTGTGTTGAAAACTAGGCAGCAAGTTGCTCAATCACAAGTTTCTTGTATTAAGACAGCGTTTTCATTGATTAAAGGTGAGGGGTTTAGAGCGTTGTATCGTGGATTTGGTACTTCGTTGATGGGTACTATCCCTGCTAGAGCTTTATACATGGCTGCACTTGAGGTTACTAAGAGTAATGTTGGGACTGCTACTGTTGGTTTAGGTCTTGCTGAACCAACTGCTGCTGCAATTGCGAATGCAGTTGCTGGTTTGACTGCAGCTTTGGCAGCTCAACTTGTGTGGACCCCGGTTGATGTTGTGAGCCAAAGGTTGATGGTTCAAGGTGGTTGTAATTCAAGTTATCCTAAGGGTTCATCTGTTAGGTATGCTAATGGGATTGATGCATTTAGGAAAATTATGAGGACAGATGGTCCTAAGGGTTTGTATAGAGGTTTTGGGATATCAGTTGTGACGTATGCGCCTTCAAATGCAGTTTGGTGGGCTTCATATTCTGTTGCACAAAGGATGGTTTGGGGTGGAGTCGGATGTTACTTGACTAACAAGAAAGGTGGGGAGGGAAGCGATAATACCAATGGGGGTAATGTGTTGAGGCCGGATACGAAAACTGTTATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCGGGAGGCATGTCTGCTTTGATTACTATGCCATTGGATACAATCAAGACAAGGCTGCAGGTCTTGGATGGCGATGAGAATGGCCGTCGTGGACCAACAGTGATGCAGACAGTTAGAAGTTTGGTTAAGGAAGGTGGTTGGACGGCTTGTTATAGAGGATTGGGACCTAGATGGGCTTCAATGTCTGTGTCTGCAACAACAATGATCACAACCTATGAGTTCCTTAAACGGCTTTCCGCAAAGAATCAAGAGGTTTTGACATGA 1053 0.4425 MDMSNVDEEESEEEIHVPAEIDWQMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQVAQSQVSCIKTAFSLIKGEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVGLGLAEPTAAAIANAVAGLTAALAAQLVWTPVDVVSQRLMVQGGCNSSYPKGSSVRYANGIDAFRKIMRTDGPKGLYRGFGISVVTYAPSNAVWWASYSVAQRMVWGGVGCYLTNKKGGEGSDNTNGGNVLRPDTKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRSLVKEGGWTACYRGLGPRWASMSVSATTMITTYEFLKRLSAKNQEVLT* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2298 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 219 IPR018108 -
Tpr5g2298 350 SUPERFAMILY Mitochondrial carrier 24 338 IPR023395 -
Tpr5g2298 350 Pfam Mitochondrial carrier protein 38 109 IPR018108 -
Tpr5g2298 350 Pfam Mitochondrial carrier protein 256 345 IPR018108 -
Tpr5g2298 350 Pfam Mitochondrial carrier protein 126 220 IPR018108 -
Tpr5g2298 350 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 347 - -
Tpr5g2298 350 PRINTS Mitochondrial carrier protein signature 32 45 IPR002067 GO:0055085
Tpr5g2298 350 PRINTS Mitochondrial carrier protein signature 84 104 IPR002067 GO:0055085
Tpr5g2298 350 PRINTS Mitochondrial carrier protein signature 192 210 IPR002067 GO:0055085
Tpr5g2298 350 PRINTS Mitochondrial carrier protein signature 261 283 IPR002067 GO:0055085
Tpr5g2298 350 Gene3D Mitochondrial carrier domain 31 348 IPR023395 -
Tpr5g2298 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 252 341 IPR018108 -
Tpr5g2298 350 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 7 347 - -
Tpr5g2298 350 ProSiteProfiles Solute carrier (Solcar) repeat profile. 27 109 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2298 Tpr-Chr5 44057652 44059535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2298 8 347 Chloroplast and Mitochondria Gene Families AT1G72820 74.344 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2298 K15121 - gmx:100789089 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2298 5 44057652 44059535 Tpr5g2298 5 44057652 44059535 ECH