Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2292 ATGTTGACTTGCATAGCTTGTTCTAAGAATCTTAATAATGGATCTCTTCCTCATCAAGAAGAGGATGAAGCTGTGCAAACACCTAGCACCAAACAAGCCATTAAAGCTCTCACTTCTCAGATCAAGGACATGGCAGTGAAGGCTTCTGGAGCCTATAAGAATTGTAAGCCTTGTTCAGGATCTTCCAACAAGAACAAAAAGTATGCTGATTCTGATATGGGATCAGAATCAGCAAGGTTCAACTGTGCATACCGAAGAACCGGGAGTGCGAGTTCTACACCGAGAATGTGGGGGAAGGAAATGGAAGCTCGACTCAAAGGGATTTCGAGTGGAGAAGGAACACCAACATCGGTGAGTGGACGTACTGAGTCAGTTGTGTTCATGGAAGAAGAGGATGAACCTAAGGAATGGGTTGCACAAGTTGAGCCTGGTGTGCTTATTACTTTTGTTTCACTGCCCCAAGGTGGGAATGATCTAAAGAGGATACGGTTCAGTCGCGAAATGTTTAATAAATGGCAAGCTCAGAGATGGTGGGCAGAGAACTATGACAAGGTTATGGAGTTATACAATGTTCAAAGGTTCAATCAACAAACAGTTCCTCTCCCAACCCCACCCAGATCTGAAGATGAGAGTTCAAAGATTGAATCTTCAAGGGACAGCCCTGTCACGCCTCCTCTTAGCAAAGAGCGTCTGCCTCGTCATATTCACCACCAAATGGGAATGGGCTACTCCTCATCGGATTCACTGGATCATCACTTTATGCAACCTCAGCCTTTCTATGAAACAAGCCGTCTGGCATCAAAATCCAATCTTTCTGACATCGGTGTCTCAAAGACTGAAAGATCATCCATTGATGCTTCTGTAAGGACGAGTTCATCGGGAGATGAAGAAGATCACTCGGGTGAGCTCTCAATCAGCAATGCCAGTGATATGGAAACCGAGTGGGTTGAACAGGATGAACCAGGAGTATACATCACTATCAGATCACTACCAGGTGGAACCCGAGAACTTAGGCGCGTCCGCTTCAGCCGAGAGAAGTTTGGAGAAATGCATGCGAGATTGTGGTGGGAAGAAAACCGTGCGAGGATACAGGAGCAATACTTGTGA 1107 0.4571 MLTCIACSKNLNNGSLPHQEEDEAVQTPSTKQAIKALTSQIKDMAVKASGAYKNCKPCSGSSNKNKKYADSDMGSESARFNCAYRRTGSASSTPRMWGKEMEARLKGISSGEGTPTSVSGRTESVVFMEEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQTVPLPTPPRSEDESSKIESSRDSPVTPPLSKERLPRHIHHQMGMGYSSSDSLDHHFMQPQPFYETSRLASKSNLSDIGVSKTERSSIDASVRTSSSGDEEDHSGELSISNASDMETEWVEQDEPGVYITIRSLPGGTRELRRVRFSREKFGEMHARLWWEENRARIQEQYL* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2292 368 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 368 - -
Tpr5g2292 368 ProSiteProfiles BRX domain profile. 135 190 IPR013591 -
Tpr5g2292 368 MobiDBLite consensus disorder prediction 274 314 - -
Tpr5g2292 368 ProSiteProfiles BRX domain profile. 313 368 IPR013591 -
Tpr5g2292 368 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Tpr5g2292 368 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 368 IPR044532 -
Tpr5g2292 368 Pfam Transcription factor regulating root and shoot growth via Pin3 312 367 IPR013591 -
Tpr5g2292 368 Pfam Transcription factor regulating root and shoot growth via Pin3 135 189 IPR013591 -
Tpr5g2292 368 MobiDBLite consensus disorder prediction 274 290 - -
Tpr5g2292 368 MobiDBLite consensus disorder prediction 197 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2292 Tpr-Chr5 43988715 43992960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2292 1 368 Major Intrinsic Protein MIP AT1G31880 46.907 1.66e-103 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2292 - - gmx:100805480 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2292 5 43988715 43992960 Tpr5g2292 5 43988715 43992960 ECH