Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2288 ATGAATAACCAAGTTCGTGGTGAGGTCGTTGGTGACGCTGATGGTGCTGTTAGTGGCGAAGTTCGTGGTGAAGTCGTTGGTCACGCTGATGGTGCTGTTAGTGGCGAAGTTCGTGGTGAAGTCGTTGGTGACGCTGATGGTGCTGTTAGTGGCGAAGTTCGTGGTGCCGTCGACGGTGGTGTTGCTGGTGTCAGTTCAGCGCGCGATGAAGTAATGGATGCTTACTTTCAAACATTGAACGAGTTAACACAAGAGAATCCTTCTTATAGAGAACATTGTAGAGGTGATGAGGATAATATTGGAGACAATGACATTGGGTTTGATGCAGAAGATGACAATGTTGGTCACTCTGCAGATCATGATTATAATGATTATGAGGAAGATGATGAAAGCTTGGGGGGTGAACTTGACGGTGATGAAAGTTATTCTGATACTGACAATGAGTGGGAACATTTGGATGAAAGTGGGAACACGGTTGCCAACGATTTGGATGAAAATTCAGATACCGACAATGAGTGGACACATTTGGATGAAAATGCAGAGCAATTAGTCATAATTGATGGTGAGGAGGATGTTGTAAAGATTGATATGTTTAACTTGCACAATGAAGACGTTTCTAAGTTGCGATTTGGTAATTTGGAAGTTGCATACAAATTTTACTGTTGGTTTGCAAAGATGAACGGTTTTGCTGTTCGCAAAGGGCAAGATGTTAGAAATAAAGATGGAGTTCTTGTTCAAAAAACATTCGTTTGTAACCTAGAAGGCTACAGGAAAGACCGTCGCGATTTAACTGAAGTGACGCGCAAGCGTGGTCCGAAACACGAAACCAGGTGTGGTTGCAGTGCAAGACTTCGAGTGCATATTGATATAATTTCGGGTCTCTGGTACATTACTATTTTCAGTTTTGAGCACAATCATTATATGTTGACGGAGAAGCACTGTGGGCTATTGGCAGCACATAGGAAACTTACAAAATCAGATCAGATTCAAATTAAGAACTATGGTCAAGCTGGGATAAAGGTTGCTCAAATGATCGGTGCGTTTGCCAATGCTGCGGGAGGGTATGATAAGGTAGGGTTTTTGAAGAAGGATTTGCACAATCAAATTCAAAGACAAAGAAAAGAAACGTCTTCTGATGCTAAAGGTGCTGTTAAGTACCTTCTAGGTCTTAGGACTAAAGATCCATTGATGTTCGTTGCACACACGGTCGATGCTTGTGGTAGGTTGCAAAGCTTATTTTGGTGTGATGGAGAAAGCCAAAAGAATTATGAGGTTTTTGGTGATGTGTTGGCATTCGATGCTACATATAACAAAAATAAATACAGGTGCCCGTTTGTTGTATTTTCCGGTGTCAACCACCATAATCAGACAATTATCTTTGCCACTGCTGTAGTTTCTAATGAGGTTGAAGGCACATATGTGTGGTTGTTGGAGCAATTTTTGCTTGCGATGAAAGGCAAGGCCCCTGTTTCTGTAATAACAGACGGTGATGTAGCTATGAGGAATGCAATAAGGAGAGTATGTCCTAATAGTTATCATAGGTTATGTGCTTGGCATCTTCTTCGAAATGCCATGTCTAACATTGGTAACCTAGAGTTCATTCCATACTTGAAAAAATGCATGCTTGGCGATAACGATGTTTGGAAATTTGAGAAACTGTGGAATGAAATGATAGATAAGTTTGGGCTTCAAGACAACAGTTGGATCAAAGAATTGTACCAGAAAAAGAAGATGTGGTCAACAGCCCATATTAGGGGGCATTTTTTTGCAGGAATACGAACGACGTCGCGGTGTGAAGCATTTCACAGTCACATGGGTCAGTTTGTCCACTCAAAGATGAATATGACTGATTTTGTGAAGCAGTTTAATAGATGTGTATGTTATTTTCGCTTCAGGGAGGTGGAGGCGGATTTTCATTCACAATATGGAAATGCTGTCTTGCAGACCCCTCTAAGGTCACTCGAGAGGTCTGCATCAAAACAATTCACACATGAGATTTTCTGCTTGGTACGTTCTGTACTAAAAAAGGTTTCCCTGATATCATTATGTGACACTCAAGAGATGGCATCCTTTTCAATTTATTCTGTGACGAAGTATCAAGACGAAGGACATGTTTGCCGTGTATCTCACAGTCCATCAAACAATGAATTTAAATGTTCTTGTCTTAGAATGGAATCAATTGGAATTCCTTGTGAACACATCGTGGCAATTATGGTATATCTTGATACTGTTGAATTCCCGACTAATCTTGTGTTGAATCGATGGTCTAAATTTGCAAAGGACTCAATTCGTGGTAATGTTAACGATGGTTCACATTACTGGGATTCACATTTGGTTGCGAGACATGCCAATTTGGTGCATCTTAGCAAGGAAGTTTCCGATTTGGCTTACAAGGATGTTGATGATTATAAAAACTATTTGGATTATCTAACCAATGAAATCACGAGGCTTAAATCAAAGTACGTTGGTGATAACGGTCCTGTGAATTTAAATGGTCCGGTCGAAGTTGATAACATATTGAACCCTTCCTGTGCAAGAAGCAAAGGCGGTGGACCCAGTTCCAACAACACTACAGCTGGGAGAAGCAGGCGTCCAGGAACATGTGGCGGATGCTCCCAAGTTGGACACAACATAAGATCTTGTCCTAACCTGGCTGAAGATGGAGAATTTCCTGCAGCCAGTTCTGTTCAATCAATGTCTGTACGGTTAAGCGGTAACAATTACGAAGGCTACGTCAACACCAGATAG 2748 0.413 MNNQVRGEVVGDADGAVSGEVRGEVVGHADGAVSGEVRGEVVGDADGAVSGEVRGAVDGGVAGVSSARDEVMDAYFQTLNELTQENPSYREHCRGDEDNIGDNDIGFDAEDDNVGHSADHDYNDYEEDDESLGGELDGDESYSDTDNEWEHLDESGNTVANDLDENSDTDNEWTHLDENAEQLVIIDGEEDVVKIDMFNLHNEDVSKLRFGNLEVAYKFYCWFAKMNGFAVRKGQDVRNKDGVLVQKTFVCNLEGYRKDRRDLTEVTRKRGPKHETRCGCSARLRVHIDIISGLWYITIFSFEHNHYMLTEKHCGLLAAHRKLTKSDQIQIKNYGQAGIKVAQMIGAFANAAGGYDKVGFLKKDLHNQIQRQRKETSSDAKGAVKYLLGLRTKDPLMFVAHTVDACGRLQSLFWCDGESQKNYEVFGDVLAFDATYNKNKYRCPFVVFSGVNHHNQTIIFATAVVSNEVEGTYVWLLEQFLLAMKGKAPVSVITDGDVAMRNAIRRVCPNSYHRLCAWHLLRNAMSNIGNLEFIPYLKKCMLGDNDVWKFEKLWNEMIDKFGLQDNSWIKELYQKKKMWSTAHIRGHFFAGIRTTSRCEAFHSHMGQFVHSKMNMTDFVKQFNRCVCYFRFREVEADFHSQYGNAVLQTPLRSLERSASKQFTHEIFCLVRSVLKKVSLISLCDTQEMASFSIYSVTKYQDEGHVCRVSHSPSNNEFKCSCLRMESIGIPCEHIVAIMVYLDTVEFPTNLVLNRWSKFAKDSIRGNVNDGSHYWDSHLVARHANLVHLSKEVSDLAYKDVDDYKNYLDYLTNEITRLKSKYVGDNGPVNLNGPVEVDNILNPSCARSKGGGPSSNNTTAGRSRRPGTCGGCSQVGHNIRSCPNLAEDGEFPAASSVQSMSVRLSGNNYEGYVNTR* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2288 915 ProSiteProfiles Zinc finger SWIM-type profile. 694 742 IPR007527 GO:0008270
Tpr5g2288 915 MobiDBLite consensus disorder prediction 125 145 - -
Tpr5g2288 915 Pfam SWIM zinc finger 718 738 IPR007527 GO:0008270
Tpr5g2288 915 Pfam FAR1 DNA-binding domain 218 309 IPR004330 -
Tpr5g2288 915 PANTHER OS02G0262500 PROTEIN 205 815 - -
Tpr5g2288 915 Pfam MULE transposase domain 429 523 IPR018289 -
Tpr5g2288 915 MobiDBLite consensus disorder prediction 847 863 - -
Tpr5g2288 915 MobiDBLite consensus disorder prediction 844 868 - -
Tpr5g2288 915 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 205 815 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2288 Tpr-Chr5 43924094 43926928 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr5g2288 MULE 9.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2288 - - ccaj:109791994 655.981