Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2278 ATGTCTGGAATGCAAAAAACAGATTGGATGTCCTTAGTTGCCGCTCATAGCGATTCATGGTTATTTGGCGTTGCATTCTACTATGGAGCTCAATTTGTGTTTAACAAATCTGACAGGGAGCACCTTTTCAATAGTATCGATGAACTGCCAACAATATTGGAAGTTGTCGATGCTGCGGATGTTGTTAATGGTGCTGCAAAAAAACAAGTTGACGAGAAGTCTTCAGTTTTCAGATGGTCAAATCTACATGTAATTGAATATCAGATAATTGTGGTAGTTACGTCGTGGTTATTGAGTTTCGATGATGATTCTTTTGGTTATGATATGAGTTGGTGGAAAGAAGAGCAATTTAATGCATCGGATGTAGACGCAAATGGTCTTCTAAACTTAGCCGAGTTCAATGAGTGA 408 0.3848 MSGMQKTDWMSLVAAHSDSWLFGVAFYYGAQFVFNKSDREHLFNSIDELPTILEVVDAADVVNGAAKKQVDEKSSVFRWSNLHVIEYQIIVVVTSWLLSFDDDSFGYDMSWWKEEQFNASDVDANGLLNLAEFNE* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2278 135 ProSitePatterns EF-hand calcium-binding domain. 121 133 IPR018247 -
Tpr5g2278 135 PANTHER ALFIN-LIKE TRANSCRIPTION FACTOR 2 80 - -
Tpr5g2278 135 PANTHER CPG BINDING PROTEIN 2 80 IPR045104 GO:0006355|GO:0042393
Tpr5g2278 135 Pfam Alfin 3 56 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2278 Tpr-Chr5 43814038 43815123 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2278 3 71 Alfin-like Transcription Factor Family AT2G02470 57.971 7.82e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2278 - - zju:107403591 98.5969