Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2277 ATGTTTGCGAATGATTCTGTGCTTGTTAAAGAAATAGTTCAATATGTGGTGAGTAGGTTGGATGATATTCATAAGTACAAACCACATTCAAAAAGAGCACTTATAGGACTTGACAATCAAATTTCACATGTGAAATCATTGTTACTGGAAGATTCAAAAGATGTTCGTGCCATTGGCATTTGGGGTATGGCTGGTATTGGGAAAACAACTATTGCAGAGGAAGTATTTGACAGGCTATGTTCTGAATATAAAAGTTGTTACTTTATGGCTGATATCAGAGAAGAATGGAGGAGACATGGAAGGATGTATTTAAAGAAAAAGCTTTATTCTGCTCTATTAAGAAAAGAAGATTTGAATATTGAAAGACCACATGGATTGCCCTATGTTGTTGAGAGGAGACTTCGAGGTATGAAGGTTCTCGTTGTTCTTGACGATGTTAGTGATAAAGAGCAACTAGAAATTTTAATAGGAACACTTGAATGGTTTGGAAAAGGTAGTAGAATCATCATAACTACAAGCGATAAGCAAGTACTTTCCAAAAGGGTTGATGATAATGATGTATACCAGCTTAAGCCATTGGATTTTGATGACTCTTTTCAACTTTTCATATCGACAGCCTTTGGACAAAACCATCCTAAAATGGAATATGAAAATGATAAGTTATTAGAGAAAATGGTCAATTATGCCCAAGGTATTCCTTTAGTTCTGAAAGAACTAGGTTATTTTATTGGTGGAAAAGATAGAGAGGCATGGAAAAGGGAATGTGAGAAGCTAACAAGAGAGCCGTTGAAAAATGGCCATGATGCTATTAGATTGAGTTGTAATTATCTGAATGGTGTTAATGAAATTGTTGAGTGTAGAGAGAAAGATGGACAGATTTTAGAGCCACATGGATTTGCTCAACCACATATGTTAAGTTTGCCGAGGGAGCAAGGATGGAAATTTCTTAGAATGGAACGTTTTAATATCTCTGGGTATGCTTCATCGATATTTGCGAATGAATATGTGCATGTTCATAAGCACAAATCTCACTCAGAAAGATTACTTATCGGACTTCAGATGGCTATTCAAATTTCACATGTGGAATCATTGTTAATGTCAGATTCAAAAGATGTTCGTGCCATTGGCATATGGGGTATGGCTGGTATGGGGAAAACAACTATTGTAGAGGAAGTATATAGAAGGCTATGTTCTGAATATGACAGTTGTTACTTTAAGGCTAATGTTAGAAAAGAATGGGAAAGACATGGAAGGATGCATTTAAAGAAAGAGCTTTATTCTGCTCTATTAAGAAAAGAAAATTTGAATATTGAAAGACCACATGGATTGCCCTATTTTATTGAGAGGAGACTTCGACATTTGAAGGTTCTTGTTGTTCTTGACGATGTTAGTGATGAAGAGCAACTAGAAATTTTAATTGAAACACTTGATTGGTTTGGAAGAGGTAGTAGAATCATCATAACCTCAAGACATAAGCAAGTATTCCTCAACAAGGTTGATGATAATGATGTGTATCAAGCCATTGGATTTTTATGA 1536 0.3529 MFANDSVLVKEIVQYVVSRLDDIHKYKPHSKRALIGLDNQISHVKSLLLEDSKDVRAIGIWGMAGIGKTTIAEEVFDRLCSEYKSCYFMADIREEWRRHGRMYLKKKLYSALLRKEDLNIERPHGLPYVVERRLRGMKVLVVLDDVSDKEQLEILIGTLEWFGKGSRIIITTSDKQVLSKRVDDNDVYQLKPLDFDDSFQLFISTAFGQNHPKMEYENDKLLEKMVNYAQGIPLVLKELGYFIGGKDREAWKRECEKLTREPLKNGHDAIRLSCNYLNGVNEIVECREKDGQILEPHGFAQPHMLSLPREQGWKFLRMERFNISGYASSIFANEYVHVHKHKSHSERLLIGLQMAIQISHVESLLMSDSKDVRAIGIWGMAGMGKTTIVEEVYRRLCSEYDSCYFKANVRKEWERHGRMHLKKELYSALLRKENLNIERPHGLPYFIERRLRHLKVLVVLDDVSDEEQLEILIETLDWFGRGSRIIITSRHKQVFLNKVDDNDVYQAIGFL* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2277 511 Gene3D - 193 283 IPR042197 -
Tpr5g2277 511 PRINTS Disease resistance protein signature 57 72 - -
Tpr5g2277 511 PRINTS Disease resistance protein signature 133 147 - -
Tpr5g2277 511 PRINTS Disease resistance protein signature 229 243 - -
Tpr5g2277 511 Gene3D - 334 502 IPR027417 -
Tpr5g2277 511 Gene3D - 18 187 IPR027417 -
Tpr5g2277 511 Pfam NB-ARC domain 40 264 IPR002182 GO:0043531
Tpr5g2277 511 Pfam NB-ARC domain 361 495 IPR002182 GO:0043531
Tpr5g2277 511 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 278 IPR044974 GO:0006952
Tpr5g2277 511 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 337 503 IPR044974 GO:0006952
Tpr5g2277 511 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 3 278 - -
Tpr5g2277 511 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 337 503 - -
Tpr5g2277 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 278 IPR027417 -
Tpr5g2277 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 496 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2277 Tpr-Chr5 43795205 43810777 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2277 349 500 WRKY Transcription Factor Family AT4G12020 40.523 3.88e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2277 - - gmx:100802823 281.952