Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2274 ATGTTTGGATTTCATTCATCAAATTTTAGGAATGATGCTCTACTTGTTAAGGAAATAGTTAAGTATGTGTTGACAAGGTTGGATCATGTGCAACAAGTTAACTCAAAAGGACTTGTTGGAATTGGCAAACAAATTTCTCATGTGGAATCATTGTTACAGACAGAGTCAAATCATGTTCGTGCCATTGGAATTTGGGGGATGAGTGGTATAGGTAAAACAACTATTGCAGAACAAGTATACAGCAGATTATGTTCTGAATATGAATCTTGTTACTTTAAGGCTAATGTAAGAGAAGAATGGGGAAGATATGGAGATATGTATTTAAAGAAAGATATTTTTTCAACTCTATTAGGGGACCAAGAATTGAAAATTGACACACCACATGGATTGCCAGGTTTTGTTGAGAGGAGGCTTCGTCGTATGAAGGTTCTCGTTGTTCTTGACGATGTCAATGATCCACAGCAACTAGAAATTTTAATTGGAAGACTAGATTGGTTTGGAAATGGTAGTAGAATCATCATAACAACAAGAGATAAACAAGTACTTGCCAAAAGGGTTGTTGAGAATGATATATATGAGGTAAGAGCATTGGAATTTGATGACTCTTTTAGGCTTTTCATTTTGAATGCCTTTGAACAAAACCATATTGAAAAAGAGTACTTTGAGTTGTCGAAAAAGATGGTCAATTATGCTAAAGGAAATCCATTAATTGTTGAAGTTTTGGGTCGTCATCTTCGCGGAAAAGACAAAACAATATGGGAAAGCCAGTTGCAGAGGCTTACAAAAGTACCAATTAAGAGAGTCCAAGATGCTGTTAGATTGAGTTATACTGACCTTGATCGTCATGAGAAGAAGATACTTTTGGACATTGCATGTTTTTTTGATGGATTGCATCTAAAAGTTGACCAAATAAAACTGTTAGTGAAAGATCATGGTTATTCGGTAGATGTTGAGTTGGAAAGCCTTAAAAATAAAGCTCTCATAACTATTTCTCAAGATAATGTTGTATCCATGCATAGCATTATACAAGAAACGGCTGAGGAAATTGTTCGGGAAGAATCCATTGATGACCCTGGAAAGCAAAGTCGGCTACTAGATCCTGATGATATTTATCAAGTACTGAAAAATAACAAGGGTAGTGAGGCTATTAGAAGCATAGCTATCAACTTGTCGAAAATGAAGGAGGTGCAGTTAAATTCAAAGGTGTTTGCTAAAATGAAGAAACTACAATATCTGGATATTTATGGTAAGGGGTCCTCTTGTGATATTCTCCAGAGTCGAGGTGTCTTGTATCTTCCTCAAGGGCTTGAATCTTTGCCAAATGAACTCAGATACCTTCGGTGGGCACATTTCCCTTTGGAGTCCTTACCATCCAATTTTTCTGGAGAAAAACTAGTTCTATTGGACTTGCAAGACAGCCAAGTGAGAAAACTTTGGCATGAAGATCATAAGGATCTAGTTAATTTAAAATATCTTAAGCTTCGTTCATCCTCGCACCTGGTGGAGCTTCCAGACTTATCATCTGCTACAAATCTTGAAGTAATCGATCTTCGTCTATGTGGGTTGACTAGTGTACATCCATCTGTCTTTACTCTAAATAAGCTTATGAAATTAGACCTAGGTGGATGCATTTCCCTCATAAGCTTTCGAAGCAATATCCATTTAAGCTCCCTTCGTTATCTGTCCCTCGCTAGTTGCATTTCACTGAAGGATTTTTCAGTAACCTCAAAGGAAATGGTAAAGTTGAATTTAGAATTCACAGGTATCAAACAATTACCATCATCAATTGGACTTCAAACCAAACTTGAAAAGTTGCTTCTTGGACACAGTTACATTGGGAACTTGCCCGAAAGCATCAAACTTCTTACAAGTCTGAGACATCTAGGCTTAGAAGATTGTAGGAAGCTTCAAAGTCTTCCTGAGCTACCTTCATCATTGATAGCTCTAGATGTCAGTGGCTGTCTATCATTGGAGAATGTAACTTTTCCTTCAACTGCAATTCAAATGTTAAAGGAAAACAAGACGAGGGTTGCCTTCTGGAATTGCCTGAAACTGAATGAACATTCTCTCAAGGAAATTGAGCTAAATGCACAAATTAACATGATGAAATTTGCACATCAGCATATATCCATGTCTCGTAGTCACCCTTATGATGCTAAAGGCACGTACGTGTTCCCGGGAAGCAGTGTTCCAAAATGGTTGGTGTATAGAACAACACATGATTACATGACTATTGATCTCTCTTTTGCCAACCATTCCTCTCAATTGGGCTTCATATTTTGCTTCGTTGTTCCACCGGTTCCATCACAGGGTTTCATTTTGAGATTTAATATTAGTGTTGATGGTGATGATAGTCAATTGCACTTAGATAGGCCAAGTCATGAAATTAAATCAGATCATGTGTATTTAGTATATGACCGAGGTTTTTCTCGCTATCTCAATAGCCGAGTCGAAGATCAGCCAAAGTTCAAAATTAAGATTACAGCAGAATCACGCAGACTAACATCAGAGTATGTGTCATTAATGATGTTGAGAGGGTTTGGGGTCAGTCCTATAAACACCTCACAATATCTAAATTTCATTCAACAAATGGAAATGGCTGAAGGTCCAAGTATCCCAACTTCATTATGGAGTGTTGTTAACAGTCTTTTAGTAGTACTTATTTGTATAGTATTATTCCTATGGTTTGTTTAA 2694 0.3705 MFGFHSSNFRNDALLVKEIVKYVLTRLDHVQQVNSKGLVGIGKQISHVESLLQTESNHVRAIGIWGMSGIGKTTIAEQVYSRLCSEYESCYFKANVREEWGRYGDMYLKKDIFSTLLGDQELKIDTPHGLPGFVERRLRRMKVLVVLDDVNDPQQLEILIGRLDWFGNGSRIIITTRDKQVLAKRVVENDIYEVRALEFDDSFRLFILNAFEQNHIEKEYFELSKKMVNYAKGNPLIVEVLGRHLRGKDKTIWESQLQRLTKVPIKRVQDAVRLSYTDLDRHEKKILLDIACFFDGLHLKVDQIKLLVKDHGYSVDVELESLKNKALITISQDNVVSMHSIIQETAEEIVREESIDDPGKQSRLLDPDDIYQVLKNNKGSEAIRSIAINLSKMKEVQLNSKVFAKMKKLQYLDIYGKGSSCDILQSRGVLYLPQGLESLPNELRYLRWAHFPLESLPSNFSGEKLVLLDLQDSQVRKLWHEDHKDLVNLKYLKLRSSSHLVELPDLSSATNLEVIDLRLCGLTSVHPSVFTLNKLMKLDLGGCISLISFRSNIHLSSLRYLSLASCISLKDFSVTSKEMVKLNLEFTGIKQLPSSIGLQTKLEKLLLGHSYIGNLPESIKLLTSLRHLGLEDCRKLQSLPELPSSLIALDVSGCLSLENVTFPSTAIQMLKENKTRVAFWNCLKLNEHSLKEIELNAQINMMKFAHQHISMSRSHPYDAKGTYVFPGSSVPKWLVYRTTHDYMTIDLSFANHSSQLGFIFCFVVPPVPSQGFILRFNISVDGDDSQLHLDRPSHEIKSDHVYLVYDRGFSRYLNSRVEDQPKFKIKITAESRRLTSEYVSLMMLRGFGVSPINTSQYLNFIQQMEMAEGPSIPTSLWSVVNSLLVVLICIVLFLWFV* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2274 897 PRINTS Disease resistance protein signature 61 76 - -
Tpr5g2274 897 PRINTS Disease resistance protein signature 137 151 - -
Tpr5g2274 897 PRINTS Disease resistance protein signature 231 245 - -
Tpr5g2274 897 PRINTS Disease resistance protein signature 530 546 - -
Tpr5g2274 897 Gene3D - 17 191 IPR027417 -
Tpr5g2274 897 Pfam NB-ARC domain 50 268 IPR002182 GO:0043531
Tpr5g2274 897 Gene3D - 196 280 IPR042197 -
Tpr5g2274 897 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 290 IPR027417 -
Tpr5g2274 897 Gene3D Ribonuclease Inhibitor 576 717 IPR032675 -
Tpr5g2274 897 Gene3D Ribonuclease Inhibitor 331 575 IPR032675 -
Tpr5g2274 897 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 889 IPR044974 GO:0006952
Tpr5g2274 897 SUPERFAMILY "Winged helix" DNA-binding domain 267 375 IPR036390 -
Tpr5g2274 897 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 7 889 - -
Tpr5g2274 897 SUPERFAMILY L domain-like 388 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2274 Tpr-Chr5 43758056 43786853 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2274 10 641 WRKY Transcription Factor Family AT4G12020 36.661 2.41e-99 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2274 - - cam:101503346 1165.98