Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2267 ATGGAGGAGCTTGTGAAAATAGTTGAGTGTAGAGAAAAATATGGTAGGATTGTAATGCCAGTTTTCTACCAAGTTGAGCCTTCAGTCGTACGGCATCAAAATGGAACTTATAGAGATGCTTTTGCTCAACATAAACAAAAGTATAGCGCGGACAAAGTGCAAAGCTGGATATCTAATTTGAAGCTATCTGCCAATATTTCTGGATTTGATTCATCACATTTTTCGGATGATGCTAAGCTTGTTGAAGAAATACTTCAAAGTGTGTTGATGAAGTTGAATCAAATGGATGAAGGCAAGTCAAAAGGACTTGTAGGAATTGAGAAACAAATTTCACCTGTAGAATCATTGTTACATTTAGAGTCGGAAGATGTTCGTGTTCTTGGAATTTGGGGTATGCCTGGTATTGGTAAAACAACTATTGCAGAAGAAGTATTTCGAAGACTATGTTCTGACTACGAAAGTTGTTGTTTTATGGCGAATGTAAGAGAAGAATCAGAAAGATATGGCACACACAATTTGAGACTAAGAAAAAAGCTTTTATCCACTCTATTAGAGGAAGAAGATTTGAAAGATGACATGATAAATGGATTACCTCCTTTGGTTAAGAAAAGGCTTCGCCGCATGAAGGTTCTTATGGTTCTTGATGATGTCAAAGATGCGGAGCAACTTGAAGCTTTGGTTGGAAAAGTTGATTGGTTTGGACCAAGAAGTAGAATCATCATAACTACAAGAGATAAGCAGGTACTTGCTGGAAAAGTCGATGATATATACAAGGTTGAGCCATTGGACTCTGCTGAATCTTTTCAGCTTTTCAATTTGCATGCTTTTAATAAACAAAAGCATCTTGAAACTGAGTACGATAAGCTATTAATGAAGATGGTCGATTATTCCGAAGGTGTTCCACTAGTTCTTAAAGCTTTAGCTAACCTTCTTTGTGGAAAAGATAAAGCCATATGGGAAAGCCAAGCAAGGAGTCTGAAAATAGAGCAGATTGAAGATGTTCATAATGTTTTTAGATTGATATACAACAATCTTGATTATTATGAAAAGATTATATTCTTGGATATTGCCTGCTTTTTTGATGGATTGAAGTTGAAACTTGACCTCATAAAACTTCTATTGCAAGATCGTCATTATTCGGTGAGCAATAGATTAGACAGACTAAAAGATAAAGCCCTTGTAACTATTTCTCAACAAAGTATTGTATCAATGCATGACATTATACAAGAAACCGCTTGGGAGATTGTTCGCCAAGAATCTGTTGAAGAACCTGGTAGCCGAAGCCGACTATTGGATCCTGATGACATTTATCATGTATTGAAAGATGAGAAGGGAAGTGAGGCAATCAGAAGTATGGCCATCAGACTATCTGAAATTAAGGAGCTGCAGTTAAGTCCACAAGTATTTTCCAAGATGAGAAAATTGAAATTTTTGGATATTTATACTAATGGATCGCAAAATGAAGGGAGTTTGTCTCTTCCTCAAGGGCTTGAATCCTTGCCTAATGAACTAAGATATCTTCGTTGGGAGTATTACCCTTTGGATTCCTTGCCGTCCAAGTTTTCTGCAGAAAACCTTGTTACATTGAACTTGCCTTATAGCAAACTGAAAAAACTTTGGCATGGAGTGAAGGATCTTGTGAATTTGAATGTCCTTATACTCCATTCATCCACATTCCTAACAGAGCTACCGGACTTTTCGAAGGCCACCAGCCTTGAAGTAGTGGACCTTTATTTCTGTCTAAAGAAACTTGATCTGAGTGGATGTGTTACCCTTACAAGCCTTCAAAGCAATAACAACCATTTAAGTTCCCTTAGTTGTCTCTCCCTCTACAACTGCACATCATTGAAGGAATTCTCAGTGACCTCAGAGAATATGAACGAATTGAATTTAGAACTCACAAGTATCAAACAACTACCCTCATCAATGGGAATTCAAACCAAACTCGAAAAGTTACATCTAGGACACACTCACATTGAGAGCTTGCCAAATAGTATCAAGAATCTTACAAGGCTGAGACATTTAGACTTGCATCATTGCAGGGAGCTTAAAACTCTACCAGAACTTCCTCCATCGCTAGAAACACTAGTTGCCGATGGTTGTATATCACTAGAGAATGTATTGTTCCGCTCGACTGCTAGTGAACAACTCGAGGAAAAGAAGAAAAAGGTTAGGTTTTGGAATTGCCTTAAACTAAATGAGCCTTCTCTCAAGGCTATTGAGTTGAATGCTCAAATTAACATAATGAACTTTTCACACCAGCATATATCCACATGGGACCGTGATCATGATCACGATCATGACCATGATCGAGTTCAAGGCTCGTACGTGTATCCAGGTAGCAAAATTCCAGAGTGGTTGGAATATAATACAAGTACACATGATTACATAACTATTGATCTTTCTTCTGCTCCTTATTTCTCTAAGTTAGGATTCATTTTTGGCTTCATCATTCCAACCATCTCATCAGAAGGTTTAACTCTGAAATTCAAAATCAGCGACGGTGATGGTGAAGGTATCAAAGTGTACTTGGACAGACCACTTCGTGGAATTGAATCGGATCATGTATATCTAATGTATGATCCAAGATGTTCTCATTACCTAGCTAGCCGAGTCAATGATCAGTCACAGATTAAAATTCAGGTTACTGTGTCATCAAGAACATTGACATCACAGTATGAGTCAGTGCAGTTAAGAGAGTTTGGGGTTAGCCTAGTAACCCCTTCACAATATGGCAAGTTTAAACAGCAATTTGAAACTGGTGATGGTAGTGTTGTTCCAAATAATGTGTTCGCAGAAGAGGGATCATCGAAGTTTCTAGAAATTTAA 2829 0.3768 MEELVKIVECREKYGRIVMPVFYQVEPSVVRHQNGTYRDAFAQHKQKYSADKVQSWISNLKLSANISGFDSSHFSDDAKLVEEILQSVLMKLNQMDEGKSKGLVGIEKQISPVESLLHLESEDVRVLGIWGMPGIGKTTIAEEVFRRLCSDYESCCFMANVREESERYGTHNLRLRKKLLSTLLEEEDLKDDMINGLPPLVKKRLRRMKVLMVLDDVKDAEQLEALVGKVDWFGPRSRIIITTRDKQVLAGKVDDIYKVEPLDSAESFQLFNLHAFNKQKHLETEYDKLLMKMVDYSEGVPLVLKALANLLCGKDKAIWESQARSLKIEQIEDVHNVFRLIYNNLDYYEKIIFLDIACFFDGLKLKLDLIKLLLQDRHYSVSNRLDRLKDKALVTISQQSIVSMHDIIQETAWEIVRQESVEEPGSRSRLLDPDDIYHVLKDEKGSEAIRSMAIRLSEIKELQLSPQVFSKMRKLKFLDIYTNGSQNEGSLSLPQGLESLPNELRYLRWEYYPLDSLPSKFSAENLVTLNLPYSKLKKLWHGVKDLVNLNVLILHSSTFLTELPDFSKATSLEVVDLYFCLKKLDLSGCVTLTSLQSNNNHLSSLSCLSLYNCTSLKEFSVTSENMNELNLELTSIKQLPSSMGIQTKLEKLHLGHTHIESLPNSIKNLTRLRHLDLHHCRELKTLPELPPSLETLVADGCISLENVLFRSTASEQLEEKKKKVRFWNCLKLNEPSLKAIELNAQINIMNFSHQHISTWDRDHDHDHDHDRVQGSYVYPGSKIPEWLEYNTSTHDYITIDLSSAPYFSKLGFIFGFIIPTISSEGLTLKFKISDGDGEGIKVYLDRPLRGIESDHVYLMYDPRCSHYLASRVNDQSQIKIQVTVSSRTLTSQYESVQLREFGVSLVTPSQYGKFKQQFETGDGSVVPNNVFAEEGSSKFLEI* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2267 942 Gene3D - 95 255 IPR027417 -
Tpr5g2267 942 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 933 IPR044974 GO:0006952
Tpr5g2267 942 SUPERFAMILY L domain-like 454 756 - -
Tpr5g2267 942 Pfam Leucine Rich Repeat 525 544 IPR011713 -
Tpr5g2267 942 Gene3D - 1 94 IPR035897 -
Tpr5g2267 942 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 2 933 - -
Tpr5g2267 942 Gene3D Ribonuclease Inhibitor 439 624 IPR032675 -
Tpr5g2267 942 Gene3D Ribonuclease Inhibitor 625 742 IPR032675 -
Tpr5g2267 942 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 356 IPR027417 -
Tpr5g2267 942 Pfam TIR domain 2 104 IPR000157 GO:0007165
Tpr5g2267 942 Pfam NB-ARC domain 119 343 IPR002182 GO:0043531
Tpr5g2267 942 Pfam Leucine Rich repeats (2 copies) 647 690 IPR025875 -
Tpr5g2267 942 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 68 IPR035897 -
Tpr5g2267 942 Gene3D - 262 346 IPR042197 -
Tpr5g2267 942 PRINTS Disease resistance protein signature 126 141 - -
Tpr5g2267 942 PRINTS Disease resistance protein signature 204 218 - -
Tpr5g2267 942 PRINTS Disease resistance protein signature 297 311 - -
Tpr5g2267 942 PRINTS Disease resistance protein signature 667 683 - -
Tpr5g2267 942 ProSiteProfiles TIR domain profile. 1 92 IPR000157 GO:0007165
Tpr5g2267 942 SUPERFAMILY "Winged helix" DNA-binding domain 333 441 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2267 Tpr-Chr5 43708421 43711872 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2267 4 705 WRKY Transcription Factor Family AT4G12020 36.027 4.17e-113 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2267 - - mtr:MTR_8g020360 1444.48