Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2231 ATGACCATGGAACCAAACCCAACATCAGATCACATTCTTGACTGGCTTGAAGGTTCTGTCTCTTTCTTTCCATCATTCTTGGATGATCCATATAACAACGGTTACATCCAAGAGTATCCCTTATGGGATCAGAACCAAGATATACACAACCAGTATCAGATTGATGTTAATACTAATTCCCCTAATGGTACCAACAGCACCAACAACATTGTTGCTGCTAGTACTACTACTACCACTAGCACAACATCACTTGAGCCTATTAGTTCTAACAATATACCCTTTTCTGATTTACCGAAGAAACGCAATGCCGAGGATGAACCAGGTCTCAAAAAACAATCACAAAACCAAAAGAACAAGAGAATCAAGAGTCGTCCGACGAATGAAGCTGATAATGGTGATGCAGCTATTGAAGGGACAGTGGTTAGAAAACCTGGTGGGAACAAGAAAGGTGCAGGTAAGGCCAGTGGAAATAACAGTGGCAATGGAAACAACAAGGATGGTAGGTGGGCTGAGGAGTTGCTCAACCCATGTGCTGCAGCTATAACTGGTGGAAATCTGAATCGCGTGCAACATCTATTATATGTTCTTCATGAGCTAGCCTCAACTACTGGTGATGCCAACCACCGGCTTGCAGCGCATGGTCTCCGAGCACTGACACACCATCTATCTTCATCTTCATCATCTACCACATCAGGGACTATAACTTTTGCATCTACAGAACCGCGATTCTTCCAAAAGTCGTTACTGAAATTCTATGAGGTTAGCCCTTGGTTTTCCTTTCCTAATAACATAGCAAATGCTTCCATCCTCCAAGTCCTAGCTGAAGAGCCGAACAGTTCGCGTTCTCTTCACATCCTTGACATTGGAGTCTCTCATGGGGTGCAGTGGCCAACTTTTCTAGAGGCCTTGAGTCGTCGACCTGGTGGACCTCCTCCTCTGGTTCGCCTCACTGTGGTTACTGCTTCATCAACTGAAAATGACCAAAATATGGAAACCCCATTTTCAGTAGGTCCATGTGGTGATAACTTCTCTTCTAGACTCCTTGGTTATGCTCAGTCCATAAATGTCAATTTGCAGATAAACAAGCTTGATAATCATCCATTACAGACACTAAATGCTCAAAGTGTTGACACCTCCCCTGATGAAACTCTTATAGTCTGTGCTCAGTTCAGGTTGCACCACTTGAATCATAATGCTCCCGATGAAAGAAGAGAGTTTCTGAAGGTGTTGAGAGACATGGAGCCTAAAGGGGTGATATTGAGTGAGAATAACATGGAGTGTTGCTGCAGTAGTTGTGGCGATTTCGCCACTGGATTCTCTCGAAGAGTGGAGTACTTATGGAGGTTTTTAGATTCAACCAGTTCGGCATTCAAAGGCCGTGAGAGTGATGAAAGGAGAATGATGGAAGGTGAGGCTGCAAAAGCATTGACAAACCAACGTGAGATGAACGAAGGGAAAGAAAAATGGTGTGAAAGAATGAAAGAAGCAGGATTTGCGGGTGAAGTATTTGGAGAGGATGCAATTGATGGAGGTCGAGCTTTGTTAAGGAAGTATGATAATAATTGGGAGATGAAAGTAGAAGAAGAGAACAGTACAACTGTGGGACTATGGTGGAAGGGTCAACCTGTTTCTTTCTGTTCTTTGTGGAAACTGGATAAACAGAATAGTTCAAGCTCAACATTGACAGCAAAGCTTTAA 1698 0.4329 MTMEPNPTSDHILDWLEGSVSFFPSFLDDPYNNGYIQEYPLWDQNQDIHNQYQIDVNTNSPNGTNSTNNIVAASTTTTTSTTSLEPISSNNIPFSDLPKKRNAEDEPGLKKQSQNQKNKRIKSRPTNEADNGDAAIEGTVVRKPGGNKKGAGKASGNNSGNGNNKDGRWAEELLNPCAAAITGGNLNRVQHLLYVLHELASTTGDANHRLAAHGLRALTHHLSSSSSSTTSGTITFASTEPRFFQKSLLKFYEVSPWFSFPNNIANASILQVLAEEPNSSRSLHILDIGVSHGVQWPTFLEALSRRPGGPPPLVRLTVVTASSTENDQNMETPFSVGPCGDNFSSRLLGYAQSINVNLQINKLDNHPLQTLNAQSVDTSPDETLIVCAQFRLHHLNHNAPDERREFLKVLRDMEPKGVILSENNMECCCSSCGDFATGFSRRVEYLWRFLDSTSSAFKGRESDERRMMEGEAAKALTNQREMNEGKEKWCERMKEAGFAGEVFGEDAIDGGRALLRKYDNNWEMKVEEENSTTVGLWWKGQPVSFCSLWKLDKQNSSSSTLTAKL* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2231 565 PANTHER NODULATION-SIGNALING PATHWAY 1 PROTEIN-LIKE 4 550 IPR030015 -
Tpr5g2231 565 MobiDBLite consensus disorder prediction 98 113 - -
Tpr5g2231 565 MobiDBLite consensus disorder prediction 76 167 - -
Tpr5g2231 565 Pfam GRAS domain family 171 550 IPR005202 -
Tpr5g2231 565 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 550 IPR005202 -
Tpr5g2231 565 MobiDBLite consensus disorder prediction 76 96 - -
Tpr5g2231 565 ProSiteProfiles GRAS family profile. 161 550 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2231 Tpr-Chr5 43328726 43330885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2231 2 550 GRAS Transcription Factor Family AT3G13840 51.799 4.19e-180 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr5g2231 GRAS 3.5e-76 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2231 - - gmx:100806550 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2231 5 43328726 43330885 Tpr5g2231 5 43328726 43330885 ECH
Tpr5g2231 5 43328726 43330885 Tpr7g4590 7 54355608 54357357 PCT